General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000393765
Gene ID:	ENSG00000121578
Gene Name:	B4GALT4
Sequence (UNICHARACTER ENCODING)	AGUGCUAGCUCGCCGCGGCCGCCUCCGGGGACCACCUGGCUUCAUGUGUGGAUUUCCACGGCUCUUGCCCAGAGGCGGGUACACUGUGUUCCAAUGUGCCACGGAACUCACGCAGUGGCACUUUGUGGCUUCAUGAAGGAAGAGGCAGGCCACGCAACACUUCCUCCCCAAGCCAAGGAGAAGUAUCACUUUUAGAGGCAGAGGAGCGGAAGGCAGUGGGUGUGACCAAAAGUGCCAUUUGUUAAAGACUGUUGGAGCAGAACUACUGAGAAAAACCAGGCAUUGUAUCUUCAGUUGUCAUCAAGUUCGCAAUCAGAUUGGAAAAGCUCAACUUGAAGCUUUCUUGCCUGCAGUGAAGCAGAGAGAUAGAUAUUAUUCACGUAAUAAAAAACAUGGGCUUCAACCUGЖCUUUCCACCUUUCCUACAAAUUCCGAUUACUGUUGCUGUUGЖCUUUGUGCCUGACAGUGGUUGGGUGGGCCACCAGUAЖCUACUUCGUGGGUGCCAUUCAAGAGAUUCCUAAAGCAAAGGAGUUCAUGGCUAAUUUCCAUAAGACCCUCAUUUUGGGGAAGGGAAAAACUCUGACUAAUGAAGCAPCCACGAAGAAGGUAGAACUUGACAACUGCCCUUCUGUGUCUCCUUACCUCAGAGGCCAGAGCAAGCUCAUUUUCAAACCAGAUCUCACUUUGGAAGAGGUACAGGCAGAAAAUCCCAAAGUGUCCAGAGGCCGGUAUCGCCCUCAGGAAUGUAAAGCUPUACAGAGGGUCGCCAPCCUCGUUCCCCACCGGAACAGAGAGAAACACCUGAUGUACCUGCUGGAACAUCUGCAPCCCUUCCUGCAGAGGCAGCAGCUGGAUUAUGGCAUCUACGUCAUCCACCAGGCUGAAGGUAAAAAGUUUAAUCGAGCCAAЖCUCUUGAAUGUGGGCUAUCUAGAAGCCCUCAAGGAAGAAAAUUGGGACUGCUPUAUAUUCCACGAUGUGGACCUGGUACCCGAGAAUGACUPUAACCUUUACAAGUGUGAGGAGCAUCCCAAGCAUCUGGUGGUUGGCAGGAACAGCACUGGGUACAGGUUACGUUACAGUGGAUAUUUUGGGGGUGUUACUGCCCUAAGCAGAGAGCAGUUUUUCAAGGUGAAUGGAUUCUCUAЖCAACUACUGGGGAUGGGGAGGCGAAGACGAUGACCUCAGACUCAGGGUUGAGCUCCAAAGAAUGAAAAUUUCCCGGCCCCUGCCUGAAGUGGGUAAAUAUACAAUGGUCUUCCACACUAGAGACAAAGGCAAUGAGGUGAACGCAGAACGGAUGAAGCUCUUACACCAAGUGUCACGAGUCUGGAGAACAGAUGGGUUGAGUAGUUGUUCUUAUAAAUUAGUAUCUGUGGAACACAAUCCUPUAUAUAUCAACAUCACAGUGGAUUUCUGGUUUGGUGCAUGACCCUGGGUCUUUUGGUGAUGUUUGGAAGAЖCUGAUUCUUUGUUUGCAAUAAUUUUGGCCUAGAGЖCUUCAAAUAGUAGCACACAUUAAGAACCUGUUACAGCUCAUUGUUGAGCUGAAUUUUUCCUUUUUGUAUUUUCUUAGCAGAGCUCCUGGUGAUGUAGAGUAUAAAACAGUUGUAACAAGACAGCUUUCUUAGUCAUUUUGAUCAUGAGGGUUAAAUAUUGUAAUAUGGAUACUUGAAGGЖCUPUAUAUAAAAGGAUGACUCAAAGGAUAAAAUGAACGCUAUUUGAGGЖCUCUGGUUGAAGGAGAUUUAUUUAAAUUUGAAGUAAUAUAUUAUGGGAUAAAAGGCCACAGGAAAUAAGЖCUGCUGAAUGUCUGAGAGAACCAGAGUUGUUCUCGUCCAAGGUAGAAAGGUACGAAGAUACAAUACUGUUAUUCAUUUAUCCUGUACAAUCAUCUGUGAAGUGGUGGUGUCAGGUGAGAAGGCGUCCACAAAAGAGGGGAGAAAAGGCGACGAAUCAGGACACAGUGAACUUGGGAAUGAAGAGGUAGCAGGAGGGUGGAGUGUCGGCUGCAAAGGCAGCAGUAGCUGAGCUGGUUGCAGCUGCUGAUAGCCUUCAGGGGAGGЖCCUGCCCAGGUAUGCCUUCCAGUGAUGCCCACCAGAGAAUACAUUCUCUAUUAGUUUUUAAAGAGUUUUUGUAAAAUGAUUUUGUACAAGUAGGAUAUGAAUUAGCAGUUUACAAGUUUACAUAUUAACUAAUAAUAAAUAUGUCUAUCAAAUACCUCUGUAGUAAAAUGUGAAAAAGC
Sequence (SHORT NAMES ENCODING)	AGUGCUAGCUCGCCGCGGCCGCCUCCGGGGACCACCUGGCUUCAUGUGUGGAUUUCCACGGCUCUUGCCCAGAGGCGGGUACACUGUGUUCCAAUGUGCCACGGAACUCACGCAGUGGCACUUUGUGGCUUCAUGAAGGAAGAGGCAGGCCACGCAACACUUCCUCCCCAAGCCAAGGAGAAGUAUCACUUUUAGAGGCAGAGGAGCGGAAGGCAGUGGGUGUGACCAAAAGUGCCAUUUGUUAAAGACUGUUGGAGCAGAACUACUGAGAAAAACCAGGCAUUGUAUCUUCAGUUGUCAUCAAGUUCGCAAUCAGAUUGGAAAAGCUCAACUUGAAGCUUUCUUGCCUGCAGUGAAGCAGAGAGAUAGAUAUUAUUCACGUAAUAAAAAACAUGGGCUUCAACCUGm6ACUUUCCACCUUUCCUACAAAUUCCGAUUACUGUUGCUGUUGm6ACUUUGUGCCUGACAGUGGUUGGGUGGGCCACCAGUAm6ACUACUUCGUGGGUGCCAUUCAAGAGAUUCCUAAAGCAAAGGAGUUCAUGGCUAAUUUCCAUAAGACCCUCAUUUUGGGGAAGGGAAAAACUCUGACUAAUGAAGCAYCCACGAAGAAGGUAGAACUUGACAACUGCCCUUCUGUGUCUCCUUACCUCAGAGGCCAGAGCAAGCUCAUUUUCAAACCAGAUCUCACUUUGGAAGAGGUACAGGCAGAAAAUCCCAAAGUGUCCAGAGGCCGGUAUCGCCCUCAGGAAUGUAAAGCUYUACAGAGGGUCGCCAYCCUCGUUCCCCACCGGAACAGAGAGAAACACCUGAUGUACCUGCUGGAACAUCUGCAYCCCUUCCUGCAGAGGCAGCAGCUGGAUUAUGGCAUCUACGUCAUCCACCAGGCUGAAGGUAAAAAGUUUAAUCGAGCCAAm6ACUCUUGAAUGUGGGCUAUCUAGAAGCCCUCAAGGAAGAAAAUUGGGACUGCUYUAUAUUCCACGAUGUGGACCUGGUACCCGAGAAUGACUYUAACCUUUACAAGUGUGAGGAGCAUCCCAAGCAUCUGGUGGUUGGCAGGAACAGCACUGGGUACAGGUUACGUUACAGUGGAUAUUUUGGGGGUGUUACUGCCCUAAGCAGAGAGCAGUUUUUCAAGGUGAAUGGAUUCUCUAm6ACAACUACUGGGGAUGGGGAGGCGAAGACGAUGACCUCAGACUCAGGGUUGAGCUCCAAAGAAUGAAAAUUUCCCGGCCCCUGCCUGAAGUGGGUAAAUAUACAAUGGUCUUCCACACUAGAGACAAAGGCAAUGAGGUGAACGCAGAACGGAUGAAGCUCUUACACCAAGUGUCACGAGUCUGGAGAACAGAUGGGUUGAGUAGUUGUUCUUAUAAAUUAGUAUCUGUGGAACACAAUCCUYUAUAUAUCAACAUCACAGUGGAUUUCUGGUUUGGUGCAUGACCCUGGGUCUUUUGGUGAUGUUUGGAAGAm6ACUGAUUCUUUGUUUGCAAUAAUUUUGGCCUAGAGm6ACUUCAAAUAGUAGCACACAUUAAGAACCUGUUACAGCUCAUUGUUGAGCUGAAUUUUUCCUUUUUGUAUUUUCUUAGCAGAGCUCCUGGUGAUGUAGAGUAUAAAACAGUUGUAACAAGACAGCUUUCUUAGUCAUUUUGAUCAUGAGGGUUAAAUAUUGUAAUAUGGAUACUUGAAGGm6ACUYUAUAUAAAAGGAUGACUCAAAGGAUAAAAUGAACGCUAUUUGAGGm6ACUCUGGUUGAAGGAGAUUUAUUUAAAUUUGAAGUAAUAUAUUAUGGGAUAAAAGGCCACAGGAAAUAAGm6ACUGCUGAAUGUCUGAGAGAACCAGAGUUGUUCUCGUCCAAGGUAGAAAGGUACGAAGAUACAAUACUGUUAUUCAUUUAUCCUGUACAAUCAUCUGUGAAGUGGUGGUGUCAGGUGAGAAGGCGUCCACAAAAGAGGGGAGAAAAGGCGACGAAUCAGGACACAGUGAACUUGGGAAUGAAGAGGUAGCAGGAGGGUGGAGUGUCGGCUGCAAAGGCAGCAGUAGCUGAGCUGGUUGCAGCUGCUGAUAGCCUUCAGGGGAGGm6ACCUGCCCAGGUAUGCCUUCCAGUGAUGCCCACCAGAGAAUACAUUCUCUAUUAGUUUUUAAAGAGUUUUUGUAAAAUGAUUUUGUACAAGUAGGAUAUGAAUUAGCAGUUUACAAGUUUACAUAUUAACUAAUAAUAAAUAUGUCUAUCAAAUACCUCUGUAGUAAAAUGUGAAAAAGC
Sequence (MODOMICS CODE ENCODING)	AGUGCUAGCUCGCCGCGGCCGCCUCCGGGGACCACCUGGCUUCAUGUGUGGAUUUCCACGGCUCUUGCCCAGAGGCGGGUACACUGUGUUCCAAUGUGCCACGGAACUCACGCAGUGGCACUUUGUGGCUUCAUGAAGGAAGAGGCAGGCCACGCAACACUUCCUCCCCAAGCCAAGGAGAAGUAUCACUUUUAGAGGCAGAGGAGCGGAAGGCAGUGGGUGUGACCAAAAGUGCCAUUUGUUAAAGACUGUUGGAGCAGAACUACUGAGAAAAACCAGGCAUUGUAUCUUCAGUUGUCAUCAAGUUCGCAAUCAGAUUGGAAAAGCUCAACUUGAAGCUUUCUUGCCUGCAGUGAAGCAGAGAGAUAGAUAUUAUUCACGUAAUAAAAAACAUGGGCUUCAACCUG2000000006ACUUUCCACCUUUCCUACAAAUUCCGAUUACUGUUGCUGUUG2000000006ACUUUGUGCCUGACAGUGGUUGGGUGGGCCACCAGUA2000000006ACUACUUCGUGGGUGCCAUUCAAGAGAUUCCUAAAGCAAAGGAGUUCAUGGCUAAUUUCCAUAAGACCCUCAUUUUGGGGAAGGGAAAAACUCUGACUAAUGAAGCA2000000009UCCACGAAGAAGGUAGAACUUGACAACUGCCCUUCUGUGUCUCCUUACCUCAGAGGCCAGAGCAAGCUCAUUUUCAAACCAGAUCUCACUUUGGAAGAGGUACAGGCAGAAAAUCCCAAAGUGUCCAGAGGCCGGUAUCGCCCUCAGGAAUGUAAAGCU2000000009UUACAGAGGGUCGCCA2000000009UCCUCGUUCCCCACCGGAACAGAGAGAAACACCUGAUGUACCUGCUGGAACAUCUGCA2000000009UCCCUUCCUGCAGAGGCAGCAGCUGGAUUAUGGCAUCUACGUCAUCCACCAGGCUGAAGGUAAAAAGUUUAAUCGAGCCAA2000000006ACUCUUGAAUGUGGGCUAUCUAGAAGCCCUCAAGGAAGAAAAUUGGGACUGCU2000000009UUAUAUUCCACGAUGUGGACCUGGUACCCGAGAAUGACU2000000009UUAACCUUUACAAGUGUGAGGAGCAUCCCAAGCAUCUGGUGGUUGGCAGGAACAGCACUGGGUACAGGUUACGUUACAGUGGAUAUUUUGGGGGUGUUACUGCCCUAAGCAGAGAGCAGUUUUUCAAGGUGAAUGGAUUCUCUA2000000006ACAACUACUGGGGAUGGGGAGGCGAAGACGAUGACCUCAGACUCAGGGUUGAGCUCCAAAGAAUGAAAAUUUCCCGGCCCCUGCCUGAAGUGGGUAAAUAUACAAUGGUCUUCCACACUAGAGACAAAGGCAAUGAGGUGAACGCAGAACGGAUGAAGCUCUUACACCAAGUGUCACGAGUCUGGAGAACAGAUGGGUUGAGUAGUUGUUCUUAUAAAUUAGUAUCUGUGGAACACAAUCCU2000000009UUAUAUAUCAACAUCACAGUGGAUUUCUGGUUUGGUGCAUGACCCUGGGUCUUUUGGUGAUGUUUGGAAGA2000000006ACUGAUUCUUUGUUUGCAAUAAUUUUGGCCUAGAG2000000006ACUUCAAAUAGUAGCACACAUUAAGAACCUGUUACAGCUCAUUGUUGAGCUGAAUUUUUCCUUUUUGUAUUUUCUUAGCAGAGCUCCUGGUGAUGUAGAGUAUAAAACAGUUGUAACAAGACAGCUUUCUUAGUCAUUUUGAUCAUGAGGGUUAAAUAUUGUAAUAUGGAUACUUGAAGG2000000006ACU2000000009UUAUAUAAAAGGAUGACUCAAAGGAUAAAAUGAACGCUAUUUGAGG2000000006ACUCUGGUUGAAGGAGAUUUAUUUAAAUUUGAAGUAAUAUAUUAUGGGAUAAAAGGCCACAGGAAAUAAG2000000006ACUGCUGAAUGUCUGAGAGAACCAGAGUUGUUCUCGUCCAAGGUAGAAAGGUACGAAGAUACAAUACUGUUAUUCAUUUAUCCUGUACAAUCAUCUGUGAAGUGGUGGUGUCAGGUGAGAAGGCGUCCACAAAAGAGGGGAGAAAAGGCGACGAAUCAGGACACAGUGAACUUGGGAAUGAAGAGGUAGCAGGAGGGUGGAGUGUCGGCUGCAAAGGCAGCAGUAGCUGAGCUGGUUGCAGCUGCUGAUAGCCUUCAGGGGAGG2000000006ACCUGCCCAGGUAUGCCUUCCAGUGAUGCCCACCAGAGAAUACAUUCUCUAUUAGUUUUUAAAGAGUUUUUGUAAAAUGAUUUUGUACAAGUAGGAUAUGAAUUAGCAGUUUACAAGUUUACAUAUUAACUAAUAAUAAAUAUGUCUAUCAAAUACCUCUGUAGUAAAAUGUGAAAAAGC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	408	450	487	594	753	769	827	908	961	1000	1144	1386	1457	1492	1672	1675	1721	1791	2055
Modification Positions	m6A	m6A	m6A	Y	Y	Y	Y	m6A	Y	Y	m6A	Y	m6A	m6A	m6A	Y	m6A	m6A	m6A
Genomic Coordinates	3:119230084:-	3:119230042:-	3:119230005:-	3:119229898:-	3:119226934:-	3:119226918:-	3:119226860:-	3:119224216:-	3:119224163:-	3:119224124:-	3:119218695:-	3:119212590:-	3:119212519:-	3:119212484:-	3:119212304:-	3:119212301:-	3:119212255:-	3:119212185:-	3:119211921:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	Lny8GcCeVGc9 bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 f6YSioLdAWpr	BtsJQJ3DteUq bXBqJigD9oV3	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BkoLW2CBToyL Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8