General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000273047
Gene ID:	ENSG00000144566
Gene Name:	RAB5A
Sequence (UNICHARACTER ENCODING)	AGUUCGCUGCGUGCAGCGACGUGGCGGCGGGGCCGGCACCGGGCAGCGGAAGUGGCUCCGGCGGUGGGЖCUUGAGUGUUUGUGUUUUGGUUCGUGAAGGAGCCGGCGGCUGGCCUUAGGGGAGGAGGCAGAGGGAGGAGGAGGAGGAAGAAUUAGUCGGAACUCCAGCGCCGGCGGCGGCGGCGGCGGCGGAGGAGGAGAAAGGAAAGAGGAAGGGGGAGCGGCGAGAGGCGGAGACGGAGCCCGACAGGGGCGGCACCACGGCACGAGCCCCGCACAGUCCAGUGUGAGGGGAGCGGCGCUAAGAGCAGGCGACGCCGCCGCCGCCACCACCACCGCCAUAGAUACACUCUCAPCCUACGGGCCACGCCUGGGCCUUGCUGCCAGGAAGCUUCGGCCCCGCAGCUCGGCUUGCUGCGGUCUCAGGUUUCUPUACCUCCAGAAAGAAGAAUAUUGGCCCCUUGAAUUCUGGAAGUUCAUUGAAGAGUCUGAAAUUAGGGЖCUUAUUUCAAAUUUGGЖCAUGGCUAGUCGAGGCGCAACAAGACCCAACGGGCCAAAUACGGGAAAUAAAAUAUGCCAGUUCAAACUAGUACUUCUGGGAGAGUCCGCUGUUGGCAAAUCAAGCCUAGUGCUUCGUUUUGUGAAAGGCCAAUUUCAUGAAUUUCAAGAGAGUACCAUUGGGGCUGCUUUUCUAACCCAAACUGUAUGUCUUGAUGACACUACAGUAAAGUUUGAAAUAUGGGAUACAGCUGGUCAAGAACGAUACCAUAGCCUAGCACCAAUGUACUACAGAGGAGCACAAGCAGCCAUAGUUGUAUAUGAUAUCACAAAUGAGGAGUCCUUUGCAAGAGCAAAAAAUUGGGUUAAAGAACUUCAGAGGCAAGCAAGUCCUAACAUUGUAAUAGCUPUAUCGGGAAACAAGGCCGACCUAGCAAAUAAAAGAGCAGUAGAUUUCCAGGAAGCACAGUCCUAUGCAGAUGACAAUAGUUUAUUAUUCAUGGAGACAPCCGCUAAAACAUCAAUGAAUGUAAAUGAAAUAUUCAUGGCAAUAGCUAAAAAAUUGCCAAAGAAUGAACCACAAAAUCCAGGAGCAAAUUCUGCCAGAGGAAGAGGAGUAGACCUUACCGAACCCACACAACCAACCAGGAAUCAGUGUUGUAGUAЖCUAAACCUCUAGUUUGAACUAGCUGGAAUAGUCUUCUGCUUCCUAAAUGUUAAUAACAAUGGAAUUGGAGCAUUUAACCAGCCCAGUAUGACUUCCAAAAGAAGAGЖCUUAUGAUAGAGUCAAGUUUCUAAUACAGAAUUAUUUUAAGUGUUUUGAACUUAAUUUUUAAUAACAUGCAUGGGUCCCUCUCACUAAUGUUUCAACAAUAGGGAAAAAUGAGAACUAUGUGGACACUUGUUUCAUUGGAAGGUUAGGGGGAAUAAUUUCUCAUCACUAGGAAUAUAGACAAAUGACUGUCUGGGCCCACACAGUUAACCAGCCCAUUUCUCCACACUGGUACAGUAGUCACCUGUGAAAAAAAAAUUGGAЖCUUACUAAUUUGGGCUUUUCAAAAACAUUCUUUGUUUAGAAGGAGAUUCUAAAGUUAUUUAUGAUGCUUAGCCAUAGUAUUCAGGCAAAUGUUCAUUUCUCCUGGUACCUGUAUUUAAAAUGUACAUUCCACAUUUUAAUAAAUUAACCACAAGAAAAUAAUCCCACAUAUACAAGGUCAGGGGUGGGGAAGAGUAUUAAUGGUAUCUUAAUUAUACCCAGUCUGGUUUUUUUUUUUUAAAUGGGGUAAAAAUCAAAUGCAACCCCAUCUUGUUUUAGGAAUUUUGAGAACUAAUAAAUGCACCUUAAUGGUCAGUGUUCCUUUCAAACAUGUGAGUUCUPUAACAAAAAUGAAAUAAACCAGGUGUCUGUGAUUUCUAAUUAAUCACCGCUGGCCAUUACACAGGUUUUGUUGUUUGGGGUGGGGAGGGGGCUUUUGUUCCCUUUUGACAUAAUAUAGUCAAUGCACUAACAAUUAUGUAUAUUCAAACUUGAUUAUUUUAAAUUCGAUCUUCAGCUGUACUGUAAAUAGGGUACUGCAUUGUAGUCUCCAUAUCUGUAUUACUUUUCUGUAAUAUUUAAGAGUUGCUUAAAAGCAUACAAAAUGUACUGUUACUAAAACAGCUAAUUAUUUCUCUCUCCCCCUUUGACAGGAAGGGGCUUCAGUUGUUCCPCCAUGGCUAGAACCAUAAUAAЖCAAUGUACCCGUAAUUUGUAACAUAAAGUAUUGCAAUAUGUUAGUAACAAUCUUGCAGCCUUCCUUUCCAAAGUUCAUUUUAUUUUGAUCAGUUCAGUAUAUUGCACUAAUUAUUUUAGGUAUUUUCAUUAUAUGAAAGCUACCAUGUGUCAGAGAUGAUUUAAUCUAUUUAAGUGUUGGACUGCUAGGAGAACUUGUACAUUUAUGAUAAUGCAGAAUUAGGAAAACGGUUCACCAGUGUUUAGUUUUAUAUUGAGGUGCUCAGGUUGGAAUAAAGUGGUAUAAAAAGCAA
Sequence (SHORT NAMES ENCODING)	AGUUCGCUGCGUGCAGCGACGUGGCGGCGGGGCCGGCACCGGGCAGCGGAAGUGGCUCCGGCGGUGGGm6ACUUGAGUGUUUGUGUUUUGGUUCGUGAAGGAGCCGGCGGCUGGCCUUAGGGGAGGAGGCAGAGGGAGGAGGAGGAGGAAGAAUUAGUCGGAACUCCAGCGCCGGCGGCGGCGGCGGCGGCGGAGGAGGAGAAAGGAAAGAGGAAGGGGGAGCGGCGAGAGGCGGAGACGGAGCCCGACAGGGGCGGCACCACGGCACGAGCCCCGCACAGUCCAGUGUGAGGGGAGCGGCGCUAAGAGCAGGCGACGCCGCCGCCGCCACCACCACCGCCAUAGAUACACUCUCAYCCUACGGGCCACGCCUGGGCCUUGCUGCCAGGAAGCUUCGGCCCCGCAGCUCGGCUUGCUGCGGUCUCAGGUUUCUYUACCUCCAGAAAGAAGAAUAUUGGCCCCUUGAAUUCUGGAAGUUCAUUGAAGAGUCUGAAAUUAGGGm6ACUUAUUUCAAAUUUGGm6ACAUGGCUAGUCGAGGCGCAACAAGACCCAACGGGCCAAAUACGGGAAAUAAAAUAUGCCAGUUCAAACUAGUACUUCUGGGAGAGUCCGCUGUUGGCAAAUCAAGCCUAGUGCUUCGUUUUGUGAAAGGCCAAUUUCAUGAAUUUCAAGAGAGUACCAUUGGGGCUGCUUUUCUAACCCAAACUGUAUGUCUUGAUGACACUACAGUAAAGUUUGAAAUAUGGGAUACAGCUGGUCAAGAACGAUACCAUAGCCUAGCACCAAUGUACUACAGAGGAGCACAAGCAGCCAUAGUUGUAUAUGAUAUCACAAAUGAGGAGUCCUUUGCAAGAGCAAAAAAUUGGGUUAAAGAACUUCAGAGGCAAGCAAGUCCUAACAUUGUAAUAGCUYUAUCGGGAAACAAGGCCGACCUAGCAAAUAAAAGAGCAGUAGAUUUCCAGGAAGCACAGUCCUAUGCAGAUGACAAUAGUUUAUUAUUCAUGGAGACAYCCGCUAAAACAUCAAUGAAUGUAAAUGAAAUAUUCAUGGCAAUAGCUAAAAAAUUGCCAAAGAAUGAACCACAAAAUCCAGGAGCAAAUUCUGCCAGAGGAAGAGGAGUAGACCUUACCGAACCCACACAACCAACCAGGAAUCAGUGUUGUAGUAm6ACUAAACCUCUAGUUUGAACUAGCUGGAAUAGUCUUCUGCUUCCUAAAUGUUAAUAACAAUGGAAUUGGAGCAUUUAACCAGCCCAGUAUGACUUCCAAAAGAAGAGm6ACUUAUGAUAGAGUCAAGUUUCUAAUACAGAAUUAUUUUAAGUGUUUUGAACUUAAUUUUUAAUAACAUGCAUGGGUCCCUCUCACUAAUGUUUCAACAAUAGGGAAAAAUGAGAACUAUGUGGACACUUGUUUCAUUGGAAGGUUAGGGGGAAUAAUUUCUCAUCACUAGGAAUAUAGACAAAUGACUGUCUGGGCCCACACAGUUAACCAGCCCAUUUCUCCACACUGGUACAGUAGUCACCUGUGAAAAAAAAAUUGGAm6ACUUACUAAUUUGGGCUUUUCAAAAACAUUCUUUGUUUAGAAGGAGAUUCUAAAGUUAUUUAUGAUGCUUAGCCAUAGUAUUCAGGCAAAUGUUCAUUUCUCCUGGUACCUGUAUUUAAAAUGUACAUUCCACAUUUUAAUAAAUUAACCACAAGAAAAUAAUCCCACAUAUACAAGGUCAGGGGUGGGGAAGAGUAUUAAUGGUAUCUUAAUUAUACCCAGUCUGGUUUUUUUUUUUUAAAUGGGGUAAAAAUCAAAUGCAACCCCAUCUUGUUUUAGGAAUUUUGAGAACUAAUAAAUGCACCUUAAUGGUCAGUGUUCCUUUCAAACAUGUGAGUUCUYUAACAAAAAUGAAAUAAACCAGGUGUCUGUGAUUUCUAAUUAAUCACCGCUGGCCAUUACACAGGUUUUGUUGUUUGGGGUGGGGAGGGGGCUUUUGUUCCCUUUUGACAUAAUAUAGUCAAUGCACUAACAAUUAUGUAUAUUCAAACUUGAUUAUUUUAAAUUCGAUCUUCAGCUGUACUGUAAAUAGGGUACUGCAUUGUAGUCUCCAUAUCUGUAUUACUUUUCUGUAAUAUUUAAGAGUUGCUUAAAAGCAUACAAAAUGUACUGUUACUAAAACAGCUAAUUAUUUCUCUCUCCCCCUUUGACAGGAAGGGGCUUCAGUUGUUCCYCCAUGGCUAGAACCAUAAUAAm6ACAAUGUACCCGUAAUUUGUAACAUAAAGUAUUGCAAUAUGUUAGUAACAAUCUUGCAGCCUUCCUUUCCAAAGUUCAUUUUAUUUUGAUCAGUUCAGUAUAUUGCACUAAUUAUUUUAGGUAUUUUCAUUAUAUGAAAGCUACCAUGUGUCAGAGAUGAUUUAAUCUAUUUAAGUGUUGGACUGCUAGGAGAACUUGUACAUUUAUGAUAAUGCAGAAUUAGGAAAACGGUUCACCAGUGUUUAGUUUUAUAUUGAGGUGCUCAGGUUGGAAUAAAGUGGUAUAAAAAGCAA
Sequence (MODOMICS CODE ENCODING)	AGUUCGCUGCGUGCAGCGACGUGGCGGCGGGGCCGGCACCGGGCAGCGGAAGUGGCUCCGGCGGUGGG2000000006ACUUGAGUGUUUGUGUUUUGGUUCGUGAAGGAGCCGGCGGCUGGCCUUAGGGGAGGAGGCAGAGGGAGGAGGAGGAGGAAGAAUUAGUCGGAACUCCAGCGCCGGCGGCGGCGGCGGCGGCGGAGGAGGAGAAAGGAAAGAGGAAGGGGGAGCGGCGAGAGGCGGAGACGGAGCCCGACAGGGGCGGCACCACGGCACGAGCCCCGCACAGUCCAGUGUGAGGGGAGCGGCGCUAAGAGCAGGCGACGCCGCCGCCGCCACCACCACCGCCAUAGAUACACUCUCA2000000009UCCUACGGGCCACGCCUGGGCCUUGCUGCCAGGAAGCUUCGGCCCCGCAGCUCGGCUUGCUGCGGUCUCAGGUUUCU2000000009UUACCUCCAGAAAGAAGAAUAUUGGCCCCUUGAAUUCUGGAAGUUCAUUGAAGAGUCUGAAAUUAGGG2000000006ACUUAUUUCAAAUUUGG2000000006ACAUGGCUAGUCGAGGCGCAACAAGACCCAACGGGCCAAAUACGGGAAAUAAAAUAUGCCAGUUCAAACUAGUACUUCUGGGAGAGUCCGCUGUUGGCAAAUCAAGCCUAGUGCUUCGUUUUGUGAAAGGCCAAUUUCAUGAAUUUCAAGAGAGUACCAUUGGGGCUGCUUUUCUAACCCAAACUGUAUGUCUUGAUGACACUACAGUAAAGUUUGAAAUAUGGGAUACAGCUGGUCAAGAACGAUACCAUAGCCUAGCACCAAUGUACUACAGAGGAGCACAAGCAGCCAUAGUUGUAUAUGAUAUCACAAAUGAGGAGUCCUUUGCAAGAGCAAAAAAUUGGGUUAAAGAACUUCAGAGGCAAGCAAGUCCUAACAUUGUAAUAGCU2000000009UUAUCGGGAAACAAGGCCGACCUAGCAAAUAAAAGAGCAGUAGAUUUCCAGGAAGCACAGUCCUAUGCAGAUGACAAUAGUUUAUUAUUCAUGGAGACA2000000009UCCGCUAAAACAUCAAUGAAUGUAAAUGAAAUAUUCAUGGCAAUAGCUAAAAAAUUGCCAAAGAAUGAACCACAAAAUCCAGGAGCAAAUUCUGCCAGAGGAAGAGGAGUAGACCUUACCGAACCCACACAACCAACCAGGAAUCAGUGUUGUAGUA2000000006ACUAAACCUCUAGUUUGAACUAGCUGGAAUAGUCUUCUGCUUCCUAAAUGUUAAUAACAAUGGAAUUGGAGCAUUUAACCAGCCCAGUAUGACUUCCAAAAGAAGAG2000000006ACUUAUGAUAGAGUCAAGUUUCUAAUACAGAAUUAUUUUAAGUGUUUUGAACUUAAUUUUUAAUAACAUGCAUGGGUCCCUCUCACUAAUGUUUCAACAAUAGGGAAAAAUGAGAACUAUGUGGACACUUGUUUCAUUGGAAGGUUAGGGGGAAUAAUUUCUCAUCACUAGGAAUAUAGACAAAUGACUGUCUGGGCCCACACAGUUAACCAGCCCAUUUCUCCACACUGGUACAGUAGUCACCUGUGAAAAAAAAAUUGGA2000000006ACUUACUAAUUUGGGCUUUUCAAAAACAUUCUUUGUUUAGAAGGAGAUUCUAAAGUUAUUUAUGAUGCUUAGCCAUAGUAUUCAGGCAAAUGUUCAUUUCUCCUGGUACCUGUAUUUAAAAUGUACAUUCCACAUUUUAAUAAAUUAACCACAAGAAAAUAAUCCCACAUAUACAAGGUCAGGGGUGGGGAAGAGUAUUAAUGGUAUCUUAAUUAUACCCAGUCUGGUUUUUUUUUUUUAAAUGGGGUAAAAAUCAAAUGCAACCCCAUCUUGUUUUAGGAAUUUUGAGAACUAAUAAAUGCACCUUAAUGGUCAGUGUUCCUUUCAAACAUGUGAGUUCU2000000009UUAACAAAAAUGAAAUAAACCAGGUGUCUGUGAUUUCUAAUUAAUCACCGCUGGCCAUUACACAGGUUUUGUUGUUUGGGGUGGGGAGGGGGCUUUUGUUCCCUUUUGACAUAAUAUAGUCAAUGCACUAACAAUUAUGUAUAUUCAAACUUGAUUAUUUUAAAUUCGAUCUUCAGCUGUACUGUAAAUAGGGUACUGCAUUGUAGUCUCCAUAUCUGUAUUACUUUUCUGUAAUAUUUAAGAGUUGCUUAAAAGCAUACAAAAUGUACUGUUACUAAAACAGCUAAUUAUUUCUCUCUCCCCCUUUGACAGGAAGGGGCUUCAGUUGUUCC2000000009UCCAUGGCUAGAACCAUAAUAA2000000006ACAAUGUACCCGUAAUUUGUAACAUAAAGUAUUGCAAUAUGUUAGUAACAAUCUUGCAGCCUUCCUUUCCAAAGUUCAUUUUAUUUUGAUCAGUUCAGUAUAUUGCACUAAUUAUUUUAGGUAUUUUCAUUAUAUGAAAGCUACCAUGUGUCAGAGAUGAUUUAAUCUAUUUAAGUGUUGGACUGCUAGGAGAACUUGUACAUUUAUGAUAAUGCAGAAUUAGGAAAACGGUUCACCAGUGUUUAGUUUUAUAUUGAGGUGCUCAGGUUGGAAUAAAGUGGUAUAAAAAGCAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	69	355	432	500	517	906	1005	1162	1269	1531	1872	2204	2226
Modification Positions	m6A	Y	Y	m6A	m6A	Y	Y	m6A	m6A	m6A	Y	Y	m6A
Genomic Coordinates	3:19947165:+	3:19947451:+	3:19950812:+	3:19950880:+	3:19950897:+	3:19976119:+	3:19978358:+	3:19983819:+	3:19983926:+	3:19984188:+	3:19984529:+	3:19984861:+	3:19984883:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	4HMi5ykupT9V 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U KTLz8piFYdwC BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL nfCHyrYzE6fB WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8