General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000475937
Gene ID:	ENSG00000114861
Gene Name:	FOXP1
Sequence (UNICHARACTER ENCODING)	AUGCUAAUAAAAUGCAGGAUUUUGGACACUGAGCAAGGCACUUCAGGUGGCAAGACAGCUCCUUCUUCAGCAGCAACAGCAGCAGCAAGUUAGUGGAUUAAAAUCUCCCAAGAGGAAUGACAAACAACCAGCUCUUCAGCAACAGCAGGUGGCUACCCAGCAGUUGGCUUUUCAGCAGCAGCUUUUACAGAUGCAGCAGUUACAGCAGCAGCACCUCCUGUCUUUGCAGCGCCAAGGCCUUCUGACAAUUCAGCCCGGGCAGCCUGCCCUUCCCCUUCAACCUCUUGCUCAAGGCAUGAUUCCAACAGAACUGCAGCAGCUCUGGAAAGAAGUGACAAGUGCUCAUACUGCAGAAGAAACCACAGGCAACAAUCACAGCAGUUUGGAUCUGACCACGACAUGUGUCUCCUCCUCUGCACCUUCCAAGACCUCCUUAAUAAUGAACCCACAUGCCUCUACCAAUGGACAGCUCUCAGUCCACACUCCCAAAAGGGAAAGUUUGUCCCAUGAGGAGCACCCCCAUAGCCAUCCUCUCUAUGGACAUGGUGUAUGCAAGUGGCCAGGCUGUGAAGCAGUGUGCGAAGAUUUCCAAUCAUUUCUAAAACAUCUCAACAGUGAGCAUGCGCUGGACGAUAGAAGUACAGCCCAAUGUAGAGUACAAAUGCAGGUUGUACAGCAGUUAGAGCUACAGCUUGCAAAAGACAAAGAACGCCUGCAAGCCAUGAUGACCCACCUGCAUGUGAAGUCUACAGAACCCAAAGCCGCCCCUCAGCCCUUGAAUCUGGUAUCAAGUGUCACUCUCUCCAAGUCCGCAUCGGAGGCUUCUCCACAGAGCUUACCUCAUACUCCAACGACCCCAACCGCCCCCCUGACUCCCGUCACCCAAGGCCCCUCUGUCAUCACAACCACCAGCAUGCACACGGUGGGACCCAUCCGCAGGCGGUACUCAGACAAAUACAACGUGCCCAUUUCGUCAGCAGAUAUUGCGCAGAACCAAGAAUUUUAUAAGAACGCAGAAGUUAGACCACCAUUUACAUAUGCAUCUUUAAUUAGGCAGGCCAUUCUCGAAUCUCCAGAAAAGCAGCUAACACUAAAUGAGAUCUAUAACUGGUUCACACGAAUGUUUGCUUACUUCCGACGCAACGCGGCCACGUGGAAGAAUGCAGUGCGUCAUAAUCUUAGUCUUCACAAGUGUUUUGUGCGAGUAGAAAACGUUAAAGGGGCAGUAUGGACAGUGGAUGAAGUAGAAUUCCAAAAACGAAGGCCACAAAAGAUCAGUGGUAACCCUUCCCUUAUUAAAAACAUGCAGAGCAGCCACGCCUACUGCACACCUCUCAAUGCAGCUUUACAGGCUUCAAUGGCUGAGAAUAGUAUACCUCUAUACACUACCGCUUCCAUGGGAAAUCCCACUCUGGGCAACUUAGCCAGCGCAAUACGGGAAGAGCUGAACGGGGCAAUGGAGCAUACCAACAGCAACGAGAGUGACAGCAGUCCAGGCAGAUCUCCUAUGCAAGCCGUGCAUCCUGUACACGUCAAAGAAGAGCCCCUCGAUCCAGAGGAAGCUGAAGGGCCCCUGUCCUUAGUGACAACAGCCAACCACAGUCCAGAUUUUGACCAUGACAGAGAUUACGAAGAUGAACCAGUAAACGAGGЖCAUGGAGUGЖCUAUCGGGGCGGGCCAACCCCGAGAAUGAAGAUUGGAAAAAGGAAAAAAAAAAAAACACGUCAAAAGUUAGCAGUGAAAUUGUUCUCCAUUUGUUGUACAGUCUGGAGGAUUUUCACUACGUUUUGACAACUCUGAAAUGUGUUAЖCUCUUAGUGCCAUCAAGAACCCCAUUUGGGAGUAUUUUUGAUUUUUCUACUUUUUGUUGAAAAAAGGAAUUUGUACUCUGUGCAUUGGAUGGЖCUUGUUUGGUACUUGGGAUUUUCCUCUCUUAACCGUCAACAUCAGUGUUGUAAAUUUGCUAAЖCUGAUUCACUUUUAGCAGCAGЖCUUUGAЖCUGCAGUCCUGCCAACGUUGGACACUGAGGACGCCCGACAGAGCUUGUGCACCUAAGCUGCAGACCAAGCCUUUGCCCAGAAUUUAAGGAUUCCAAUGGЖCGACCUAUUUGCACA
Sequence (SHORT NAMES ENCODING)	AUGCUAAUAAAAUGCAGGAUUUUGGACACUGAGCAAGGCACUUCAGGUGGCAAGACAGCUCCUUCUUCAGCAGCAACAGCAGCAGCAAGUUAGUGGAUUAAAAUCUCCCAAGAGGAAUGACAAACAACCAGCUCUUCAGCAACAGCAGGUGGCUACCCAGCAGUUGGCUUUUCAGCAGCAGCUUUUACAGAUGCAGCAGUUACAGCAGCAGCACCUCCUGUCUUUGCAGCGCCAAGGCCUUCUGACAAUUCAGCCCGGGCAGCCUGCCCUUCCCCUUCAACCUCUUGCUCAAGGCAUGAUUCCAACAGAACUGCAGCAGCUCUGGAAAGAAGUGACAAGUGCUCAUACUGCAGAAGAAACCACAGGCAACAAUCACAGCAGUUUGGAUCUGACCACGACAUGUGUCUCCUCCUCUGCACCUUCCAAGACCUCCUUAAUAAUGAACCCACAUGCCUCUACCAAUGGACAGCUCUCAGUCCACACUCCCAAAAGGGAAAGUUUGUCCCAUGAGGAGCACCCCCAUAGCCAUCCUCUCUAUGGACAUGGUGUAUGCAAGUGGCCAGGCUGUGAAGCAGUGUGCGAAGAUUUCCAAUCAUUUCUAAAACAUCUCAACAGUGAGCAUGCGCUGGACGAUAGAAGUACAGCCCAAUGUAGAGUACAAAUGCAGGUUGUACAGCAGUUAGAGCUACAGCUUGCAAAAGACAAAGAACGCCUGCAAGCCAUGAUGACCCACCUGCAUGUGAAGUCUACAGAACCCAAAGCCGCCCCUCAGCCCUUGAAUCUGGUAUCAAGUGUCACUCUCUCCAAGUCCGCAUCGGAGGCUUCUCCACAGAGCUUACCUCAUACUCCAACGACCCCAACCGCCCCCCUGACUCCCGUCACCCAAGGCCCCUCUGUCAUCACAACCACCAGCAUGCACACGGUGGGACCCAUCCGCAGGCGGUACUCAGACAAAUACAACGUGCCCAUUUCGUCAGCAGAUAUUGCGCAGAACCAAGAAUUUUAUAAGAACGCAGAAGUUAGACCACCAUUUACAUAUGCAUCUUUAAUUAGGCAGGCCAUUCUCGAAUCUCCAGAAAAGCAGCUAACACUAAAUGAGAUCUAUAACUGGUUCACACGAAUGUUUGCUUACUUCCGACGCAACGCGGCCACGUGGAAGAAUGCAGUGCGUCAUAAUCUUAGUCUUCACAAGUGUUUUGUGCGAGUAGAAAACGUUAAAGGGGCAGUAUGGACAGUGGAUGAAGUAGAAUUCCAAAAACGAAGGCCACAAAAGAUCAGUGGUAACCCUUCCCUUAUUAAAAACAUGCAGAGCAGCCACGCCUACUGCACACCUCUCAAUGCAGCUUUACAGGCUUCAAUGGCUGAGAAUAGUAUACCUCUAUACACUACCGCUUCCAUGGGAAAUCCCACUCUGGGCAACUUAGCCAGCGCAAUACGGGAAGAGCUGAACGGGGCAAUGGAGCAUACCAACAGCAACGAGAGUGACAGCAGUCCAGGCAGAUCUCCUAUGCAAGCCGUGCAUCCUGUACACGUCAAAGAAGAGCCCCUCGAUCCAGAGGAAGCUGAAGGGCCCCUGUCCUUAGUGACAACAGCCAACCACAGUCCAGAUUUUGACCAUGACAGAGAUUACGAAGAUGAACCAGUAAACGAGGm6ACAUGGAGUGm6ACUAUCGGGGCGGGCCAACCCCGAGAAUGAAGAUUGGAAAAAGGAAAAAAAAAAAAACACGUCAAAAGUUAGCAGUGAAAUUGUUCUCCAUUUGUUGUACAGUCUGGAGGAUUUUCACUACGUUUUGACAACUCUGAAAUGUGUUAm6ACUCUUAGUGCCAUCAAGAACCCCAUUUGGGAGUAUUUUUGAUUUUUCUACUUUUUGUUGAAAAAAGGAAUUUGUACUCUGUGCAUUGGAUGGm6ACUUGUUUGGUACUUGGGAUUUUCCUCUCUUAACCGUCAACAUCAGUGUUGUAAAUUUGCUAAm6ACUGAUUCACUUUUAGCAGCAGm6ACUUUGAm6ACUGCAGUCCUGCCAACGUUGGACACUGAGGACGCCCGACAGAGCUUGUGCACCUAAGCUGCAGACCAAGCCUUUGCCCAGAAUUUAAGGAUUCCAAUGGm6ACGACCUAUUUGCACA
Sequence (MODOMICS CODE ENCODING)	AUGCUAAUAAAAUGCAGGAUUUUGGACACUGAGCAAGGCACUUCAGGUGGCAAGACAGCUCCUUCUUCAGCAGCAACAGCAGCAGCAAGUUAGUGGAUUAAAAUCUCCCAAGAGGAAUGACAAACAACCAGCUCUUCAGCAACAGCAGGUGGCUACCCAGCAGUUGGCUUUUCAGCAGCAGCUUUUACAGAUGCAGCAGUUACAGCAGCAGCACCUCCUGUCUUUGCAGCGCCAAGGCCUUCUGACAAUUCAGCCCGGGCAGCCUGCCCUUCCCCUUCAACCUCUUGCUCAAGGCAUGAUUCCAACAGAACUGCAGCAGCUCUGGAAAGAAGUGACAAGUGCUCAUACUGCAGAAGAAACCACAGGCAACAAUCACAGCAGUUUGGAUCUGACCACGACAUGUGUCUCCUCCUCUGCACCUUCCAAGACCUCCUUAAUAAUGAACCCACAUGCCUCUACCAAUGGACAGCUCUCAGUCCACACUCCCAAAAGGGAAAGUUUGUCCCAUGAGGAGCACCCCCAUAGCCAUCCUCUCUAUGGACAUGGUGUAUGCAAGUGGCCAGGCUGUGAAGCAGUGUGCGAAGAUUUCCAAUCAUUUCUAAAACAUCUCAACAGUGAGCAUGCGCUGGACGAUAGAAGUACAGCCCAAUGUAGAGUACAAAUGCAGGUUGUACAGCAGUUAGAGCUACAGCUUGCAAAAGACAAAGAACGCCUGCAAGCCAUGAUGACCCACCUGCAUGUGAAGUCUACAGAACCCAAAGCCGCCCCUCAGCCCUUGAAUCUGGUAUCAAGUGUCACUCUCUCCAAGUCCGCAUCGGAGGCUUCUCCACAGAGCUUACCUCAUACUCCAACGACCCCAACCGCCCCCCUGACUCCCGUCACCCAAGGCCCCUCUGUCAUCACAACCACCAGCAUGCACACGGUGGGACCCAUCCGCAGGCGGUACUCAGACAAAUACAACGUGCCCAUUUCGUCAGCAGAUAUUGCGCAGAACCAAGAAUUUUAUAAGAACGCAGAAGUUAGACCACCAUUUACAUAUGCAUCUUUAAUUAGGCAGGCCAUUCUCGAAUCUCCAGAAAAGCAGCUAACACUAAAUGAGAUCUAUAACUGGUUCACACGAAUGUUUGCUUACUUCCGACGCAACGCGGCCACGUGGAAGAAUGCAGUGCGUCAUAAUCUUAGUCUUCACAAGUGUUUUGUGCGAGUAGAAAACGUUAAAGGGGCAGUAUGGACAGUGGAUGAAGUAGAAUUCCAAAAACGAAGGCCACAAAAGAUCAGUGGUAACCCUUCCCUUAUUAAAAACAUGCAGAGCAGCCACGCCUACUGCACACCUCUCAAUGCAGCUUUACAGGCUUCAAUGGCUGAGAAUAGUAUACCUCUAUACACUACCGCUUCCAUGGGAAAUCCCACUCUGGGCAACUUAGCCAGCGCAAUACGGGAAGAGCUGAACGGGGCAAUGGAGCAUACCAACAGCAACGAGAGUGACAGCAGUCCAGGCAGAUCUCCUAUGCAAGCCGUGCAUCCUGUACACGUCAAAGAAGAGCCCCUCGAUCCAGAGGAAGCUGAAGGGCCCCUGUCCUUAGUGACAACAGCCAACCACAGUCCAGAUUUUGACCAUGACAGAGAUUACGAAGAUGAACCAGUAAACGAGG2000000006ACAUGGAGUG2000000006ACUAUCGGGGCGGGCCAACCCCGAGAAUGAAGAUUGGAAAAAGGAAAAAAAAAAAAACACGUCAAAAGUUAGCAGUGAAAUUGUUCUCCAUUUGUUGUACAGUCUGGAGGAUUUUCACUACGUUUUGACAACUCUGAAAUGUGUUA2000000006ACUCUUAGUGCCAUCAAGAACCCCAUUUGGGAGUAUUUUUGAUUUUUCUACUUUUUGUUGAAAAAAGGAAUUUGUACUCUGUGCAUUGGAUGG2000000006ACUUGUUUGGUACUUGGGAUUUUCCUCUCUUAACCGUCAACAUCAGUGUUGUAAAUUUGCUAA2000000006ACUGAUUCACUUUUAGCAGCAG2000000006ACUUUGA2000000006ACUGCAGUCCUGCCAACGUUGGACACUGAGGACGCCCGACAGAGCUUGUGCACCUAAGCUGCAGACCAAGCCUUUGCCCAGAAUUUAAGGAUUCCAAUGG2000000006ACGACCUAUUUGCACA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1653	1663	1809	1902	1965	1987	1994	2094
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	3:70959257:-	3:70959247:-	3:70959101:-	3:70959008:-	3:70958945:-	3:70958923:-	3:70958916:-	3:70958816:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn nfCHyrYzE6fB	6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G	5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb gBgcfFQ5WN9C jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se WiQcrNTGZHPT KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G	6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se BkoLW2CBToyL KTLz8piFYdwC WiQcrNTGZHPT Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G	6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KENzb7mwdBd9 Lny8GcCeVGc9 UKen6WEino9G	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn UKen6WEino9G