General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000495891
Gene ID:	ENSG00000163659
Gene Name:	TIPARP
Sequence (UNICHARACTER ENCODING)	CACAAACAAGCUGGAGCAGCCCAGAGGACAAGAAUUUUGGGCAGAUUUGAAUGCCAUGAACGUGUAUGAAACAACUGAAUUUGACCAACUACGAAGGCUGUCCACACCACCCUCUAGCAAUGUCAACUCUAUUUACCACACAGUCUGGAAAUUCUUCUGUAGGGACCACUUUGGAUGGAGAGAGUAUCCCGAGUCUGUCAUUCGAUUGAUUGAAGAAGCCAACUCUCGGGGUCUGAAAGAGGUUCGAUUUAUGAUGUGGAAUAACCACUACAUCCUCCACAAUUCAUUCUUCAGGAGAGAGAUAAAAAGGAGACCCCUCUUCCGCUCCUGUUUUAUACUGCUUCCAUAUUUACAGACACUUGGUGGGGUUCCCACACAAGCUCCUCCACCUCUUGAAGCAACUUCAUCAUCACAAAUUAUCUGCCCAGAUGGGGUCACUUCAGCAAACUUUUACCCUGAAACUUGGGUUUAUAUGCAUCCAUCUCAGGЖCUUCAUCCAAGUCCCUGUUUCUGCAGAGGAUAAAAGUUAUCGGAUCAUUUACAAUCUUUUUCAUAAGЖCUGUGCCUGAGUUUAAAUACAGAAUUUUGCAGAUAUUGAGAGUCCAAAACCAGUUUCUUUGGGAGAAAUAUAAAAGGAAAAAGGAAUAUAUGAACAGGAAAAUGUUUGGCCGUGACAGGAUAAUAAAUGAGAGЖCAUUUAUUUCAUGGAACAUCCCAGGAUGUGGUAGAUGGAAUCUGCAAACACAACUUUGACCCUCGAGUCUGUGGAAAGCAUGCUACAAUGUUUGGЖCAAGGCAGUUAUUUUGCAAAGAAGGCAAGCUACUCUCAUAЖCUUUUCUAAGAAGUCCUCCAAAGGAGUCCACUUCAUGUUUCUGGCCAAAGUGCUGACGGGCAGAUACACAAUGGGCAGUCAUGGCAUGAGAAGGCCCCCGCCAGUCAAUCCUGGCAGUGUCACCAGUGACCUUUAUGЖCUCUUGUGUGGAUAAUUUCUUUGAGCCUCAGAUUUUUGUCAUUUUUAAUGAUGACCAGAGUUACCCUUAUUUUGUUAUCCAAUAUGAAGAAGUCAGUAACACUGUUUCCAUUUGAAAAAUCUUGGUACUGCUAAAUUAUUUGAUAUGAЖCUCAAUCCAGCAUUUGUAGCAGGUUUUGAAUGGGUGGGACUGGGUGGGGAACAGCAUUGGACAUUAAUAGGGCACUUUUCAGACCCAUUUUUUAAAGUGCUAGAAAAUGCUUUUUUUAAAAAAAAAAUACAAGUUUUAAAAUGACCACUUACUCUUUAAUUAUUUACUAAUUGCUAGUGUACUCAGUGUGGAAAAGACUACAGAUUACACACUCUUUUCAUUCACACUUGUACAUAUAGACAGCAAUGUUAUUAGGAGCAUUAAAUUAAAAAACUGAACAGCCUAAUUUAAAUGUGGCUUGGGCCUGGUAGAAGUUUGACCAAAUGGAAUGGAGGCUGUGAGCAAUGUGAGGAUUCUAUUUAUUUAUUUACGUUUGAUAAAACUUACUGGAACUAGUACUACCAUGCGUAUUCCCUGUCCAAAGCAUCACUGCUUUGGUAUAGUAUAAGUUCAUGAAAUUCUGGUGGGUAGAAAGAAAUUUUUAUUUCUAUCAGCAGUACUAAAAUGUAUCAGCCAACCAGAGAACAUCAGUGACUUUAACUUCUGCAGAGUUUGCCCCAGAAUUCAGAGUUCUAUUUAGAGGAAGUUAAAACAACAACAAAAAACAACCAUUUGAAAAAUUUUUGUCACCAGCAAAACUUUUCACUAAUUAGUGAUAUGAAAUGUGAUUUUUGUGUUGUUAAACUUCAGCUUUGGAAAACUCAGUCUCUUUCAUUAUCAUCCAUUCCAAUUUGAAGGAGUUGGGCAGCUAAUUUGGUUAAAGGCAGUCUUGAGGGUUAGAAGUAUUACUUCCUUUUCGGGUUCCAGACCUAGCUUGUGACUGAAAGUUUUAGAAAAAGGAAGUACAUCUAUAGCCAAAUUGAUAAGGUUAUUACUGUGUUUUGCACAAAGUAUAUUAGCAAAAGUAUUUGCUGGAAUUAUUGGUAGAUGGCAGUCCCACUCCUACACCUGCUUUGUCAGAUACAGCUGGGUUCCCUGGCUGACUCUGUACCUUACUUACACUACUUACUUAAUAGAAACACAAACUUGGAAAUUGUGCCAGUGGUCCAGCUGGAGCACAACGUUUGGUGAAUAUGCUGUUUCCUCAGUUCAGAGAGGUAGCAACUAGGUAAACUCCUUAUAAAAAGCAAAUACCUGGAUUUACAAAAGUGAAAGUAGUUGUUCACAAAAGAAUUCGCCAUGGAAUUCUUUCAGUUACCAAGCUCUCCUGGUAAUGUUUGUGGUUAUAUCAUUUACACAAAACUUUUCAGGAACUUCUGUGUUGUUUAAGCAAGAUGUAUCUGUACUGAUGUCUCAGUGAAUCAGUCUGUUUAUUAAGCACUUAUCAGGGCUUCCACACACUUAUUUAUUUUGCCCUAGUUAAUCCUGUUGUUUGCUGCCAUUGGCAUGAAAUGGCCAACUGUGGCUGUUACAGUUCUUUCAUUCAAUUAUAACUUGUAAACCAGUGACUCCUAAUCUUUUUCAAGUUAAGACACCUUACCAUUGCUUAUUUGGUUUUAUGAGACUUGUUCCUUUUUUUCUCCCUAAGGAAAAAGAAAGCUPUAUGACAUAUUUAUUUUUUUAAUAAAACUAAGCAAAAAUAAAA
Sequence (SHORT NAMES ENCODING)	CACAAACAAGCUGGAGCAGCCCAGAGGACAAGAAUUUUGGGCAGAUUUGAAUGCCAUGAACGUGUAUGAAACAACUGAAUUUGACCAACUACGAAGGCUGUCCACACCACCCUCUAGCAAUGUCAACUCUAUUUACCACACAGUCUGGAAAUUCUUCUGUAGGGACCACUUUGGAUGGAGAGAGUAUCCCGAGUCUGUCAUUCGAUUGAUUGAAGAAGCCAACUCUCGGGGUCUGAAAGAGGUUCGAUUUAUGAUGUGGAAUAACCACUACAUCCUCCACAAUUCAUUCUUCAGGAGAGAGAUAAAAAGGAGACCCCUCUUCCGCUCCUGUUUUAUACUGCUUCCAUAUUUACAGACACUUGGUGGGGUUCCCACACAAGCUCCUCCACCUCUUGAAGCAACUUCAUCAUCACAAAUUAUCUGCCCAGAUGGGGUCACUUCAGCAAACUUUUACCCUGAAACUUGGGUUUAUAUGCAUCCAUCUCAGGm6ACUUCAUCCAAGUCCCUGUUUCUGCAGAGGAUAAAAGUUAUCGGAUCAUUUACAAUCUUUUUCAUAAGm6ACUGUGCCUGAGUUUAAAUACAGAAUUUUGCAGAUAUUGAGAGUCCAAAACCAGUUUCUUUGGGAGAAAUAUAAAAGGAAAAAGGAAUAUAUGAACAGGAAAAUGUUUGGCCGUGACAGGAUAAUAAAUGAGAGm6ACAUUUAUUUCAUGGAACAUCCCAGGAUGUGGUAGAUGGAAUCUGCAAACACAACUUUGACCCUCGAGUCUGUGGAAAGCAUGCUACAAUGUUUGGm6ACAAGGCAGUUAUUUUGCAAAGAAGGCAAGCUACUCUCAUAm6ACUUUUCUAAGAAGUCCUCCAAAGGAGUCCACUUCAUGUUUCUGGCCAAAGUGCUGACGGGCAGAUACACAAUGGGCAGUCAUGGCAUGAGAAGGCCCCCGCCAGUCAAUCCUGGCAGUGUCACCAGUGACCUUUAUGm6ACUCUUGUGUGGAUAAUUUCUUUGAGCCUCAGAUUUUUGUCAUUUUUAAUGAUGACCAGAGUUACCCUUAUUUUGUUAUCCAAUAUGAAGAAGUCAGUAACACUGUUUCCAUUUGAAAAAUCUUGGUACUGCUAAAUUAUUUGAUAUGAm6ACUCAAUCCAGCAUUUGUAGCAGGUUUUGAAUGGGUGGGACUGGGUGGGGAACAGCAUUGGACAUUAAUAGGGCACUUUUCAGACCCAUUUUUUAAAGUGCUAGAAAAUGCUUUUUUUAAAAAAAAAAUACAAGUUUUAAAAUGACCACUUACUCUUUAAUUAUUUACUAAUUGCUAGUGUACUCAGUGUGGAAAAGACUACAGAUUACACACUCUUUUCAUUCACACUUGUACAUAUAGACAGCAAUGUUAUUAGGAGCAUUAAAUUAAAAAACUGAACAGCCUAAUUUAAAUGUGGCUUGGGCCUGGUAGAAGUUUGACCAAAUGGAAUGGAGGCUGUGAGCAAUGUGAGGAUUCUAUUUAUUUAUUUACGUUUGAUAAAACUUACUGGAACUAGUACUACCAUGCGUAUUCCCUGUCCAAAGCAUCACUGCUUUGGUAUAGUAUAAGUUCAUGAAAUUCUGGUGGGUAGAAAGAAAUUUUUAUUUCUAUCAGCAGUACUAAAAUGUAUCAGCCAACCAGAGAACAUCAGUGACUUUAACUUCUGCAGAGUUUGCCCCAGAAUUCAGAGUUCUAUUUAGAGGAAGUUAAAACAACAACAAAAAACAACCAUUUGAAAAAUUUUUGUCACCAGCAAAACUUUUCACUAAUUAGUGAUAUGAAAUGUGAUUUUUGUGUUGUUAAACUUCAGCUUUGGAAAACUCAGUCUCUUUCAUUAUCAUCCAUUCCAAUUUGAAGGAGUUGGGCAGCUAAUUUGGUUAAAGGCAGUCUUGAGGGUUAGAAGUAUUACUUCCUUUUCGGGUUCCAGACCUAGCUUGUGACUGAAAGUUUUAGAAAAAGGAAGUACAUCUAUAGCCAAAUUGAUAAGGUUAUUACUGUGUUUUGCACAAAGUAUAUUAGCAAAAGUAUUUGCUGGAAUUAUUGGUAGAUGGCAGUCCCACUCCUACACCUGCUUUGUCAGAUACAGCUGGGUUCCCUGGCUGACUCUGUACCUUACUUACACUACUUACUUAAUAGAAACACAAACUUGGAAAUUGUGCCAGUGGUCCAGCUGGAGCACAACGUUUGGUGAAUAUGCUGUUUCCUCAGUUCAGAGAGGUAGCAACUAGGUAAACUCCUUAUAAAAAGCAAAUACCUGGAUUUACAAAAGUGAAAGUAGUUGUUCACAAAAGAAUUCGCCAUGGAAUUCUUUCAGUUACCAAGCUCUCCUGGUAAUGUUUGUGGUUAUAUCAUUUACACAAAACUUUUCAGGAACUUCUGUGUUGUUUAAGCAAGAUGUAUCUGUACUGAUGUCUCAGUGAAUCAGUCUGUUUAUUAAGCACUUAUCAGGGCUUCCACACACUUAUUUAUUUUGCCCUAGUUAAUCCUGUUGUUUGCUGCCAUUGGCAUGAAAUGGCCAACUGUGGCUGUUACAGUUCUUUCAUUCAAUUAUAACUUGUAAACCAGUGACUCCUAAUCUUUUUCAAGUUAAGACACCUUACCAUUGCUUAUUUGGUUUUAUGAGACUUGUUCCUUUUUUUCUCCCUAAGGAAAAAGAAAGCUYUAUGACAUAUUUAUUUUUUUAAUAAAACUAAGCAAAAAUAAAA
Sequence (MODOMICS CODE ENCODING)	CACAAACAAGCUGGAGCAGCCCAGAGGACAAGAAUUUUGGGCAGAUUUGAAUGCCAUGAACGUGUAUGAAACAACUGAAUUUGACCAACUACGAAGGCUGUCCACACCACCCUCUAGCAAUGUCAACUCUAUUUACCACACAGUCUGGAAAUUCUUCUGUAGGGACCACUUUGGAUGGAGAGAGUAUCCCGAGUCUGUCAUUCGAUUGAUUGAAGAAGCCAACUCUCGGGGUCUGAAAGAGGUUCGAUUUAUGAUGUGGAAUAACCACUACAUCCUCCACAAUUCAUUCUUCAGGAGAGAGAUAAAAAGGAGACCCCUCUUCCGCUCCUGUUUUAUACUGCUUCCAUAUUUACAGACACUUGGUGGGGUUCCCACACAAGCUCCUCCACCUCUUGAAGCAACUUCAUCAUCACAAAUUAUCUGCCCAGAUGGGGUCACUUCAGCAAACUUUUACCCUGAAACUUGGGUUUAUAUGCAUCCAUCUCAGG2000000006ACUUCAUCCAAGUCCCUGUUUCUGCAGAGGAUAAAAGUUAUCGGAUCAUUUACAAUCUUUUUCAUAAG2000000006ACUGUGCCUGAGUUUAAAUACAGAAUUUUGCAGAUAUUGAGAGUCCAAAACCAGUUUCUUUGGGAGAAAUAUAAAAGGAAAAAGGAAUAUAUGAACAGGAAAAUGUUUGGCCGUGACAGGAUAAUAAAUGAGAG2000000006ACAUUUAUUUCAUGGAACAUCCCAGGAUGUGGUAGAUGGAAUCUGCAAACACAACUUUGACCCUCGAGUCUGUGGAAAGCAUGCUACAAUGUUUGG2000000006ACAAGGCAGUUAUUUUGCAAAGAAGGCAAGCUACUCUCAUA2000000006ACUUUUCUAAGAAGUCCUCCAAAGGAGUCCACUUCAUGUUUCUGGCCAAAGUGCUGACGGGCAGAUACACAAUGGGCAGUCAUGGCAUGAGAAGGCCCCCGCCAGUCAAUCCUGGCAGUGUCACCAGUGACCUUUAUG2000000006ACUCUUGUGUGGAUAAUUUCUUUGAGCCUCAGAUUUUUGUCAUUUUUAAUGAUGACCAGAGUUACCCUUAUUUUGUUAUCCAAUAUGAAGAAGUCAGUAACACUGUUUCCAUUUGAAAAAUCUUGGUACUGCUAAAUUAUUUGAUAUGA2000000006ACUCAAUCCAGCAUUUGUAGCAGGUUUUGAAUGGGUGGGACUGGGUGGGGAACAGCAUUGGACAUUAAUAGGGCACUUUUCAGACCCAUUUUUUAAAGUGCUAGAAAAUGCUUUUUUUAAAAAAAAAAUACAAGUUUUAAAAUGACCACUUACUCUUUAAUUAUUUACUAAUUGCUAGUGUACUCAGUGUGGAAAAGACUACAGAUUACACACUCUUUUCAUUCACACUUGUACAUAUAGACAGCAAUGUUAUUAGGAGCAUUAAAUUAAAAAACUGAACAGCCUAAUUUAAAUGUGGCUUGGGCCUGGUAGAAGUUUGACCAAAUGGAAUGGAGGCUGUGAGCAAUGUGAGGAUUCUAUUUAUUUAUUUACGUUUGAUAAAACUUACUGGAACUAGUACUACCAUGCGUAUUCCCUGUCCAAAGCAUCACUGCUUUGGUAUAGUAUAAGUUCAUGAAAUUCUGGUGGGUAGAAAGAAAUUUUUAUUUCUAUCAGCAGUACUAAAAUGUAUCAGCCAACCAGAGAACAUCAGUGACUUUAACUUCUGCAGAGUUUGCCCCAGAAUUCAGAGUUCUAUUUAGAGGAAGUUAAAACAACAACAAAAAACAACCAUUUGAAAAAUUUUUGUCACCAGCAAAACUUUUCACUAAUUAGUGAUAUGAAAUGUGAUUUUUGUGUUGUUAAACUUCAGCUUUGGAAAACUCAGUCUCUUUCAUUAUCAUCCAUUCCAAUUUGAAGGAGUUGGGCAGCUAAUUUGGUUAAAGGCAGUCUUGAGGGUUAGAAGUAUUACUUCCUUUUCGGGUUCCAGACCUAGCUUGUGACUGAAAGUUUUAGAAAAAGGAAGUACAUCUAUAGCCAAAUUGAUAAGGUUAUUACUGUGUUUUGCACAAAGUAUAUUAGCAAAAGUAUUUGCUGGAAUUAUUGGUAGAUGGCAGUCCCACUCCUACACCUGCUUUGUCAGAUACAGCUGGGUUCCCUGGCUGACUCUGUACCUUACUUACACUACUUACUUAAUAGAAACACAAACUUGGAAAUUGUGCCAGUGGUCCAGCUGGAGCACAACGUUUGGUGAAUAUGCUGUUUCCUCAGUUCAGAGAGGUAGCAACUAGGUAAACUCCUUAUAAAAAGCAAAUACCUGGAUUUACAAAAGUGAAAGUAGUUGUUCACAAAAGAAUUCGCCAUGGAAUUCUUUCAGUUACCAAGCUCUCCUGGUAAUGUUUGUGGUUAUAUCAUUUACACAAAACUUUUCAGGAACUUCUGUGUUGUUUAAGCAAGAUGUAUCUGUACUGAUGUCUCAGUGAAUCAGUCUGUUUAUUAAGCACUUAUCAGGGCUUCCACACACUUAUUUAUUUUGCCCUAGUUAAUCCUGUUGUUUGCUGCCAUUGGCAUGAAAUGGCCAACUGUGGCUGUUACAGUUCUUUCAUUCAAUUAUAACUUGUAAACCAGUGACUCCUAAUCUUUUUCAAGUUAAGACACCUUACCAUUGCUUAUUUGGUUUUAUGAGACUUGUUCCUUUUUUUCUCCCUAAGGAAAAAGAAAGCU2000000009UUAUGACAUAUUUAUUUUUUUAAUAAAACUAAGCAAAAAUAAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	489	557	691	787	828	966	1115	2657
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	3:156703558:+	3:156703626:+	3:156704741:+	3:156704837:+	3:156704878:+	3:156705016:+	3:156705165:+	3:156706707:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd D6ncpa2PPWj3 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq	5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq	3TeAZFYFxgvp 5aTkEfEpX8Xm 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq	6UuHp6YApVKv jNkxUQNx8GRd KENzb7mwdBd9 Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac