General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000296254
Gene ID:	ENSG00000163900
Gene Name:	TMEM41A
Sequence (UNICHARACTER ENCODING)	CCCGCGGGCCGGGGUGCGGAGCCGACAUGCGCCCGCUUCUCGGCCUCCUUCUGGUCUUCGCCGGCUGCACCUUCGCCUUGUACUUGCUGUCGACGCGACUGCCCCGCGGGCGGAGACUGGGCUCCACCGAGGAGGCUGGAGGCAGGUCGCUGUGGUUCCCCUCCGACCUGGCAGAGCUGCGGGAGCUCUCUGAGGUCCUUCGAGAGUACCGGAAGGAGCACCAGGCCUACGUGUUCCUGCUCUUCUGCGGCGCCUACCUCUACAAACAGGGCUUUGCCAUCCCCGGCUCCAGCUUCCUGGUUUGAUCCCAUAUAAUUUCAUCUGUGUGCAGACAGGGUCCAPCCUGUCAACCCUAACCUCUCUGGAUGCUCUUUUCUCCUGGGЖCACUGUCUPUAAGCUGUUGGCCAUUGCCAUGGUGGCAUUAAUUCCUGGAACCCUCAUUAAAAAAUUUAGUCAGAAACAUCUGCAAUUGAAUGAAACAAGUACUGCUAAUCAUAUACACAGUAGAAAAGACACAUGAUCUGGAUUUUCUGUUUGCCACAPCCCUGGЖCUCAGUUGCUUAUUUGUGUAAUGGAUGUGGUCCUCUAAAGCCCCUCAUUGUUUUUGAUUGCCUUCUAUAGGUGAUGUGGЖCACUGUGCAUCAAUGUGCAGUGUCUUUUCAGAAAGGЖCACUCUGCUCUUGAAGGUGUAUUACAUCAGGUUUUCAAACCAGCCCUGGUGUAGCAGACACUGCAACAGAUGCCUCCUAGAAAAUGCUGUUUGUGGCCGGGCGCGGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCCGGUGAUUCACAAGGUCAGGAGUUCAAGACCAGCCUGGCCAAGAUGGUGAAAUCCUGUCUCUAAUAAAAAUACAAAAAUUAGCCAGGCGUGGUGGCAGGCACCUGUAAUCCCAGCUACUCGGGAGGCUGAGGCAGGAGAAUUGCUUGAACCAAGGUGGCAGAGGUUGCAGUAAGCCAAGAUCACACCACUGCACUCCAGCCUGGGUGAUAGAGUGAGЖCACUGUCUUGACAAAAAAAAAAAAAAAA
Sequence (SHORT NAMES ENCODING)	CCCGCGGGCCGGGGUGCGGAGCCGACAUGCGCCCGCUUCUCGGCCUCCUUCUGGUCUUCGCCGGCUGCACCUUCGCCUUGUACUUGCUGUCGACGCGACUGCCCCGCGGGCGGAGACUGGGCUCCACCGAGGAGGCUGGAGGCAGGUCGCUGUGGUUCCCCUCCGACCUGGCAGAGCUGCGGGAGCUCUCUGAGGUCCUUCGAGAGUACCGGAAGGAGCACCAGGCCUACGUGUUCCUGCUCUUCUGCGGCGCCUACCUCUACAAACAGGGCUUUGCCAUCCCCGGCUCCAGCUUCCUGGUUUGAUCCCAUAUAAUUUCAUCUGUGUGCAGACAGGGUCCAYCCUGUCAACCCUAACCUCUCUGGAUGCUCUUUUCUCCUGGGm6ACACUGUCUYUAAGCUGUUGGCCAUUGCCAUGGUGGCAUUAAUUCCUGGAACCCUCAUUAAAAAAUUUAGUCAGAAACAUCUGCAAUUGAAUGAAACAAGUACUGCUAAUCAUAUACACAGUAGAAAAGACACAUGAUCUGGAUUUUCUGUUUGCCACAYCCCUGGm6ACUCAGUUGCUUAUUUGUGUAAUGGAUGUGGUCCUCUAAAGCCCCUCAUUGUUUUUGAUUGCCUUCUAUAGGUGAUGUGGm6ACACUGUGCAUCAAUGUGCAGUGUCUUUUCAGAAAGGm6ACACUCUGCUCUUGAAGGUGUAUUACAUCAGGUUUUCAAACCAGCCCUGGUGUAGCAGACACUGCAACAGAUGCCUCCUAGAAAAUGCUGUUUGUGGCCGGGCGCGGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCCGGUGAUUCACAAGGUCAGGAGUUCAAGACCAGCCUGGCCAAGAUGGUGAAAUCCUGUCUCUAAUAAAAAUACAAAAAUUAGCCAGGCGUGGUGGCAGGCACCUGUAAUCCCAGCUACUCGGGAGGCUGAGGCAGGAGAAUUGCUUGAACCAAGGUGGCAGAGGUUGCAGUAAGCCAAGAUCACACCACUGCACUCCAGCCUGGGUGAUAGAGUGAGm6ACACUGUCUUGACAAAAAAAAAAAAAAAA
Sequence (MODOMICS CODE ENCODING)	CCCGCGGGCCGGGGUGCGGAGCCGACAUGCGCCCGCUUCUCGGCCUCCUUCUGGUCUUCGCCGGCUGCACCUUCGCCUUGUACUUGCUGUCGACGCGACUGCCCCGCGGGCGGAGACUGGGCUCCACCGAGGAGGCUGGAGGCAGGUCGCUGUGGUUCCCCUCCGACCUGGCAGAGCUGCGGGAGCUCUCUGAGGUCCUUCGAGAGUACCGGAAGGAGCACCAGGCCUACGUGUUCCUGCUCUUCUGCGGCGCCUACCUCUACAAACAGGGCUUUGCCAUCCCCGGCUCCAGCUUCCUGGUUUGAUCCCAUAUAAUUUCAUCUGUGUGCAGACAGGGUCCA2000000009UCCUGUCAACCCUAACCUCUCUGGAUGCUCUUUUCUCCUGGG2000000006ACACUGUCU2000000009UUAAGCUGUUGGCCAUUGCCAUGGUGGCAUUAAUUCCUGGAACCCUCAUUAAAAAAUUUAGUCAGAAACAUCUGCAAUUGAAUGAAACAAGUACUGCUAAUCAUAUACACAGUAGAAAAGACACAUGAUCUGGAUUUUCUGUUUGCCACA2000000009UCCCUGG2000000006ACUCAGUUGCUUAUUUGUGUAAUGGAUGUGGUCCUCUAAAGCCCCUCAUUGUUUUUGAUUGCCUUCUAUAGGUGAUGUGG2000000006ACACUGUGCAUCAAUGUGCAGUGUCUUUUCAGAAAGG2000000006ACACUCUGCUCUUGAAGGUGUAUUACAUCAGGUUUUCAAACCAGCCCUGGUGUAGCAGACACUGCAACAGAUGCCUCCUAGAAAAUGCUGUUUGUGGCCGGGCGCGGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCCGGUGAUUCACAAGGUCAGGAGUUCAAGACCAGCCUGGCCAAGAUGGUGAAAUCCUGUCUCUAAUAAAAAUACAAAAAUUAGCCAGGCGUGGUGGCAGGCACCUGUAAUCCCAGCUACUCGGGAGGCUGAGGCAGGAGAAUUGCUUGAACCAAGGUGGCAGAGGUUGCAGUAAGCCAAGAUCACACCACUGCACUCCAGCCUGGGUGAUAGAGUGAG2000000006ACACUGUCUUGACAAAAAAAAAAAAAAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	342	384	393	543	550	630	667	1032
Modification Positions	Y	m6A	Y	Y	m6A	m6A	m6A	m6A
Genomic Coordinates	3:185491715:-	3:185491673:-	3:185491664:-	3:185491514:-	3:185491507:-	3:185491427:-	3:185491390:-	3:185491025:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	aivdrAsbdKEU Ap2q43bQLNek jNkxUQNx8GRd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8