General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000466264
Gene ID:	ENSG00000121864
Gene Name:	ZNF639
Sequence (UNICHARACTER ENCODING)	CUCAGAUUACAGGCAUGUGCCACCACGCCCGGCUAAUUUUGUAUUUUCAGUCGAGACGGGGUUUCCCCAUGUUGGUCAGGCUAGUCUUGAAUUCCCGACCUCAGGUGAUCUGUUCGCCUCGGCCUCCCAAAGUGCUGGGAUUACAGGCGUGAACCACUGCACCCGGCGAGGCAUUUUUUACUGUCUACЖGAAACUUAUUGUAAUUCAUUUUUCCUCACUCCAGUAGUAAGAAUUAUACCAAAUUGAAAAGAUAUGAAUGAGUAUCCUAAAAAAAGAAAAAGGAAGACUCUACACCCUUCUCGUUAUUCAGAUUCCUCUGGAAUAAGCAGAAUUGCAGAUGGAUUCAAUGGAAUUUUCUCUGAUCAUUGUUACAGUGUCUGUUCUAUGAGACAGCCAGAUUUAAAAUAUUUUGACAACAAAGAUGAUGAUUCUGAUACCGAGACGUCAAAUGACUUGCCAAAAUUUGCAGAUGGAAUCAAGGCCAGAAACAGAAAUCAGAACUACCUGGUUCCCAGUCCUGUACUUAGAAUUCUAGACCACACUGCCUUUUCUACЖGAAAAAUCUGCUGAUAUUGUAAUUUGUGAUGAAGAGUGUGACUCACCUGAAUCAGUCAACCAGCAAACCCAAGAGGAGAGUCCUAUAGAAGUUCACACUGCUGAAGAUGUUCCAAUUGCUGUAGAAGUGCAUGCGAUUUCUGAGGAUUAUGAUAUAGAGЖCAGAAAACAAUUCCUCUGAGAGUCUCCAAGACCAAACUGAUGAAGAACCGCCAGCUAAACUUUGUAAAAUUCUUGACAAGAGCCAAGCUUUGAAUGUGЖCUGCCCAGCAGAAAUGGCCUPUACUGAGAGCUAAUAGCAGUGGCCUCUAUAAAUGUGAЖCUUUGUGAGUUUAACAGCAAAUAUUUUUCUGЖCUUAAAGCAGCAUAUGAUCCUGAAGCAUAAACGUЖCUGAUUCAAAUGUGUGUCGAGUAUGCAAGGAAAGUUUCUCUACCAAUAUGCUUCUGAUAGAACAUGCCAAACUGCAUGAAGAGGAUCCCUACAUUUGUAAAUЖCUGUGAUUAUAAGЖCAGUAAUUUUUGAGAACCUCAGCCAGCACAUUGCAGACACCCAUUUUAGUGAUCACCUCU
Sequence (SHORT NAMES ENCODING)	CUCAGAUUACAGGCAUGUGCCACCACGCCCGGCUAAUUUUGUAUUUUCAGUCGAGACGGGGUUUCCCCAUGUUGGUCAGGCUAGUCUUGAAUUCCCGACCUCAGGUGAUCUGUUCGCCUCGGCCUCCCAAAGUGCUGGGAUUACAGGCGUGAACCACUGCACCCGGCGAGGCAUUUUUUACUGUCUACm6AGAAACUUAUUGUAAUUCAUUUUUCCUCACUCCAGUAGUAAGAAUUAUACCAAAUUGAAAAGAUAUGAAUGAGUAUCCUAAAAAAAGAAAAAGGAAGACUCUACACCCUUCUCGUUAUUCAGAUUCCUCUGGAAUAAGCAGAAUUGCAGAUGGAUUCAAUGGAAUUUUCUCUGAUCAUUGUUACAGUGUCUGUUCUAUGAGACAGCCAGAUUUAAAAUAUUUUGACAACAAAGAUGAUGAUUCUGAUACCGAGACGUCAAAUGACUUGCCAAAAUUUGCAGAUGGAAUCAAGGCCAGAAACAGAAAUCAGAACUACCUGGUUCCCAGUCCUGUACUUAGAAUUCUAGACCACACUGCCUUUUCUACm6AGAAAAAUCUGCUGAUAUUGUAAUUUGUGAUGAAGAGUGUGACUCACCUGAAUCAGUCAACCAGCAAACCCAAGAGGAGAGUCCUAUAGAAGUUCACACUGCUGAAGAUGUUCCAAUUGCUGUAGAAGUGCAUGCGAUUUCUGAGGAUUAUGAUAUAGAGm6ACAGAAAACAAUUCCUCUGAGAGUCUCCAAGACCAAACUGAUGAAGAACCGCCAGCUAAACUUUGUAAAAUUCUUGACAAGAGCCAAGCUUUGAAUGUGm6ACUGCCCAGCAGAAAUGGCCUYUACUGAGAGCUAAUAGCAGUGGCCUCUAUAAAUGUGAm6ACUUUGUGAGUUUAACAGCAAAUAUUUUUCUGm6ACUUAAAGCAGCAUAUGAUCCUGAAGCAUAAACGUm6ACUGAUUCAAAUGUGUGUCGAGUAUGCAAGGAAAGUUUCUCUACCAAUAUGCUUCUGAUAGAACAUGCCAAACUGCAUGAAGAGGAUCCCUACAUUUGUAAAUm6ACUGUGAUUAUAAGm6ACAGUAAUUUUUGAGAACCUCAGCCAGCACAUUGCAGACACCCAUUUUAGUGAUCACCUCU
Sequence (MODOMICS CODE ENCODING)	CUCAGAUUACAGGCAUGUGCCACCACGCCCGGCUAAUUUUGUAUUUUCAGUCGAGACGGGGUUUCCCCAUGUUGGUCAGGCUAGUCUUGAAUUCCCGACCUCAGGUGAUCUGUUCGCCUCGGCCUCCCAAAGUGCUGGGAUUACAGGCGUGAACCACUGCACCCGGCGAGGCAUUUUUUACUGUCUAC2000000006AGAAACUUAUUGUAAUUCAUUUUUCCUCACUCCAGUAGUAAGAAUUAUACCAAAUUGAAAAGAUAUGAAUGAGUAUCCUAAAAAAAGAAAAAGGAAGACUCUACACCCUUCUCGUUAUUCAGAUUCCUCUGGAAUAAGCAGAAUUGCAGAUGGAUUCAAUGGAAUUUUCUCUGAUCAUUGUUACAGUGUCUGUUCUAUGAGACAGCCAGAUUUAAAAUAUUUUGACAACAAAGAUGAUGAUUCUGAUACCGAGACGUCAAAUGACUUGCCAAAAUUUGCAGAUGGAAUCAAGGCCAGAAACAGAAAUCAGAACUACCUGGUUCCCAGUCCUGUACUUAGAAUUCUAGACCACACUGCCUUUUCUAC2000000006AGAAAAAUCUGCUGAUAUUGUAAUUUGUGAUGAAGAGUGUGACUCACCUGAAUCAGUCAACCAGCAAACCCAAGAGGAGAGUCCUAUAGAAGUUCACACUGCUGAAGAUGUUCCAAUUGCUGUAGAAGUGCAUGCGAUUUCUGAGGAUUAUGAUAUAGAG2000000006ACAGAAAACAAUUCCUCUGAGAGUCUCCAAGACCAAACUGAUGAAGAACCGCCAGCUAAACUUUGUAAAAUUCUUGACAAGAGCCAAGCUUUGAAUGUG2000000006ACUGCCCAGCAGAAAUGGCCU2000000009UUACUGAGAGCUAAUAGCAGUGGCCUCUAUAAAUGUGA2000000006ACUUUGUGAGUUUAACAGCAAAUAUUUUUCUG2000000006ACUUAAAGCAGCAUAUGAUCCUGAAGCAUAAACGU2000000006ACUGAUUCAAAUGUGUGUCGAGUAUGCAAGGAAAGUUUCUCUACCAAUAUGCUUCUGAUAGAACAUGCCAAACUGCAUGAAGAGGAUCCCUACAUUUGUAAAU2000000006ACUGUGAUUAUAAG2000000006ACAGUAAUUUUUGAGAACCUCAGCCAGCACAUUGCAGACACCCAUUUUAGUGAUCACCUCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	189	555	715	814	835	873	905	940	1043	1057
Modification Positions	m6A	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	3:179327579:+	3:179333122:+	3:179333427:+	3:179333526:+	3:179333547:+	3:179333585:+	3:179333617:+	3:179333652:+	3:179333755:+	3:179333769:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	3kRDPWwiRCgi L6w2k2VEv4EY	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe Q36pf44ZRvxu VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 BkoLW2CBToyL nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	4HMi5ykupT9V 5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML	4HMi5ykupT9V 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML	4HMi5ykupT9V 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8