General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000264991
Gene ID:	ENSG00000081307
Gene Name:	UBA5
Sequence (UNICHARACTER ENCODING)	GAGGUGAUAAGAUAGCAUCUGCUGUGGCCAGGCAUCCCUGACACCUGACAAGAAAGUAAAGCCAAAAGUCAGCUGAAGAUAAUGGCCAUGGAGAUGUCUGUGGAGAGCCGUAAAAGCCAAUCAUGGCUGAGAUGCCUGCAGAAUCUCUGCCCAUGAGAACUCUGAGGCCUCCUUUCCUUUGGCUGUGGUAAGCCCUCUGGGAAAAGAGCAGCUACCCACCACCAGCCGCUUGAUGGCAUUGAAACGAAUGGGAAUUGUAAGCGACUAUGAGAAAAUCCGUACCUUUGCCGUAGCAAUAGUAGGUGUUGGUGGAGUAGGUAGUGUGACUGCUGAAAUGCUGACAAGAUGUGGCAUUGGUAAGUUGCUACUCUUUGAUUAUGACAAGGUGGAACUAGCCAAUAUGAAUAGACUUUUCUUCCAACCUCAUCAAGCAGGAUUAAGUAAAGUUCAAGCAGCAGAACAUACUCUGAGGAACAUUAAUCCUGAUGUUCUUUUUGAAGUACACAACUAUAAUAUAACCACAGUGGAAAACUUUCAACAUUUCAUGGAUAGAAUAAGUAAUGGUGGGUUAGAAGAAGGAAAACCUGUUGAUCUAGUUCUUAGCUGUGUGGACAAUUUUGAAGCUCGAAUGACAAUAAAUACAGCUUGUAAUGAACUUGGACAAACAUGGAUGGAAUCUGGGGUCAGUGAAAAUGCAGUUUCAGGGCAUAUACAGCUUAUAAUUCCUGGAGAAUCUGCUUGUUUUGCGUGUGCUCCACCACUUGUAGUUGCUGCAAAUAUUGAUGAAAAGACUCUGAAACGAGAAGGUGUUUGUGCAGCCAGUCUUCCUACCACUAUGGGUGUGGUUGCUGGGAUCUUAGUACAAAACGUGUUAAAGUUUCUGUUAAAUUUUGGUACUGUUAGUUUUUACCUUGGAUACAAUGCAAUGCAGGAUUUUUUUCCUACUAUGUCCAUGAAGCCAAAUCCUCAGUGUGAUGACAGAAAUUGCAGGAAGCAGCAGGAGGAAUAUAAGAAAAAGGUAGCAGCACUGCCUAAЖCAAGAGGUUAUACAAGAAGAGGAAGAGAUAAUCCAUGAAGAUAAUGAAUGGGGUAUUGAGCUGGUAUCUGAGGUUUCAGAAGAGGAACUGAAAAAUUUUUCAGGUCCAGUUCCAGACUUACCUGAAGGAAUUACAGUGGCAUACACAAUUCCAAAAAAGCAAGAAGAUUCUGUCACUGAGUUAACAGUGGAAGAUUCUGGUGAAAGCUUGGAAGACCUCAUGGCCAAAAUGAAGAAUAUGUAGAUAAUGGЖCUGGGAUAUAUUGUAUUUCUCAUGUUAAAGCCUCUUCCCUUGAAAUUAAAAAAAAAUUUUAACUGAUAAAACUUAGGGCAACAUUAAUUAAUGUAUAUUCUUACCUGAAUUGUUAUACUUUUUGAAAAUCCUGUGACUUGCCUGUUUCUCCCCGCUCCAACGAAAUCAUUAЖCUCUCCUAAAAUGUGUUUCAUUCUAGUAAGAAAACCUCAAAGGAUAUUGUAGGAUAUAAAUCUUACUUGAAAACAUAGCUGUUGAAAUGUUUUGGCCUUUUGGAGUGGGGGAAGGACAAAUCUGAUCCUGUAAUCUUUUUCUUUCCAGUAAUCCCUUGUGUCUGUUGCAUGAGGACAUGGЖCAAUAAAGUAGUAUAUGAUCCUCAGAUACAGGGAGAAGGACAAGGCAUACAGCUUAUUGAUUAGAGCUGGCAAGCAUCUGCUCAUUAUGUUUGGAAUUGCUUUCUAUAAGAAAAUUGCCCABUACUACUAЖCUUGAUCAACAAUGAAUUCAAAAUAGUUAACCUAUGAAAUAACAPCCUCUCAAAUGUUUGCUGAUGAAGUACAAGUUGAAAUGUAGUUAUUGGAAAAGUCUGUAACCUGUGGAUCAUAUAUAUUCAAAGUGAGACAAAGGCAAAUAAAAAGCAGCUAUUUUCAUGAAUAGACAAAGUUGAUUUCAGGAAGUAUAAAUUAUAUUCUGCACCGAACAAGGAACAGAAAUUAUUGCAUCUGUGGAACAUAUAUCUGGAGUUACUAUACUPUACUGAAGAGCAAGGCAUAAAUUUAGACUAAAAUCCAPCCAGAUUACACUCAUUCUPUAGGCUACUCCUGGAUACUUCAUUUAAAUUUGAUUUUCGAGGUAGUGAGAUGUCGGCAAGGUUUGUCCUGUAUAUUAGGAAUAAAGGAAAAGUUCUAAACUGCCUCUGCAAUGACUUGUAGUCAGUGGAAGAGUAUCACUUUCCCCUGAUCAUGACCACUAAACUGUAAAUUGAUAUAAAUUAGUUUUCUCUCGAGUUACACCCAAGUAAUGAAGACUUAAGAGAACCUUGGUUGAAAUAAAUUUCCAAUAGUUUGGAGACUCAUAAAUACCAUGCAGGUGUAACCACUGCCAAUAGGCUGUUUCUAUGCUUAUUUCCUAUUUUGAUUUUUACUUUGAAGAUAGGAAUAUCUAAAUUAUAUCUCUAGGGAGAAAAUGUUGUAAAAAAUUAAAAGUACAPCCCUGAUUGUAAAAUAAAGUUCAAAAAACUGAUUUCAGAAAGUCUCAACUACCAAAUGUUUUCAAUAUAUUAGUUUUGAGAUGCUAGGAUUAUACUGUGAUUCUUAUGUUUAUAGUAAAGUCUGGAAAGCAGAAGGAUAGUUUUUUUAGCCUGGAAACUUAUUUAUGUUGCCUUGGUGAGUCUUCUAUCAUUUUUUAAAAAUUUAGCUUAUUGAACUGUAAAAUAGCUUUUCUAGUAUGAGAGAUGUUUUGAAUUUAAAAAAUGAAAUGCAGUUUUUCAAAAAUAAAUUUCCUUUGGAAAUUCUUGCAUAUCAAUUUAGUAAGGUUUUAUAAAAUUUUACAAUUUGAUAAAGUAUC
Sequence (SHORT NAMES ENCODING)	GAGGUGAUAAGAUAGCAUCUGCUGUGGCCAGGCAUCCCUGACACCUGACAAGAAAGUAAAGCCAAAAGUCAGCUGAAGAUAAUGGCCAUGGAGAUGUCUGUGGAGAGCCGUAAAAGCCAAUCAUGGCUGAGAUGCCUGCAGAAUCUCUGCCCAUGAGAACUCUGAGGCCUCCUUUCCUUUGGCUGUGGUAAGCCCUCUGGGAAAAGAGCAGCUACCCACCACCAGCCGCUUGAUGGCAUUGAAACGAAUGGGAAUUGUAAGCGACUAUGAGAAAAUCCGUACCUUUGCCGUAGCAAUAGUAGGUGUUGGUGGAGUAGGUAGUGUGACUGCUGAAAUGCUGACAAGAUGUGGCAUUGGUAAGUUGCUACUCUUUGAUUAUGACAAGGUGGAACUAGCCAAUAUGAAUAGACUUUUCUUCCAACCUCAUCAAGCAGGAUUAAGUAAAGUUCAAGCAGCAGAACAUACUCUGAGGAACAUUAAUCCUGAUGUUCUUUUUGAAGUACACAACUAUAAUAUAACCACAGUGGAAAACUUUCAACAUUUCAUGGAUAGAAUAAGUAAUGGUGGGUUAGAAGAAGGAAAACCUGUUGAUCUAGUUCUUAGCUGUGUGGACAAUUUUGAAGCUCGAAUGACAAUAAAUACAGCUUGUAAUGAACUUGGACAAACAUGGAUGGAAUCUGGGGUCAGUGAAAAUGCAGUUUCAGGGCAUAUACAGCUUAUAAUUCCUGGAGAAUCUGCUUGUUUUGCGUGUGCUCCACCACUUGUAGUUGCUGCAAAUAUUGAUGAAAAGACUCUGAAACGAGAAGGUGUUUGUGCAGCCAGUCUUCCUACCACUAUGGGUGUGGUUGCUGGGAUCUUAGUACAAAACGUGUUAAAGUUUCUGUUAAAUUUUGGUACUGUUAGUUUUUACCUUGGAUACAAUGCAAUGCAGGAUUUUUUUCCUACUAUGUCCAUGAAGCCAAAUCCUCAGUGUGAUGACAGAAAUUGCAGGAAGCAGCAGGAGGAAUAUAAGAAAAAGGUAGCAGCACUGCCUAAm6ACAAGAGGUUAUACAAGAAGAGGAAGAGAUAAUCCAUGAAGAUAAUGAAUGGGGUAUUGAGCUGGUAUCUGAGGUUUCAGAAGAGGAACUGAAAAAUUUUUCAGGUCCAGUUCCAGACUUACCUGAAGGAAUUACAGUGGCAUACACAAUUCCAAAAAAGCAAGAAGAUUCUGUCACUGAGUUAACAGUGGAAGAUUCUGGUGAAAGCUUGGAAGACCUCAUGGCCAAAAUGAAGAAUAUGUAGAUAAUGGm6ACUGGGAUAUAUUGUAUUUCUCAUGUUAAAGCCUCUUCCCUUGAAAUUAAAAAAAAAUUUUAACUGAUAAAACUUAGGGCAACAUUAAUUAAUGUAUAUUCUUACCUGAAUUGUUAUACUUUUUGAAAAUCCUGUGACUUGCCUGUUUCUCCCCGCUCCAACGAAAUCAUUAm6ACUCUCCUAAAAUGUGUUUCAUUCUAGUAAGAAAACCUCAAAGGAUAUUGUAGGAUAUAAAUCUUACUUGAAAACAUAGCUGUUGAAAUGUUUUGGCCUUUUGGAGUGGGGGAAGGACAAAUCUGAUCCUGUAAUCUUUUUCUUUCCAGUAAUCCCUUGUGUCUGUUGCAUGAGGACAUGGm6ACAAUAAAGUAGUAUAUGAUCCUCAGAUACAGGGAGAAGGACAAGGCAUACAGCUUAUUGAUUAGAGCUGGCAAGCAUCUGCUCAUUAUGUUUGGAAUUGCUUUCUAUAAGAAAAUUGCCCACmUACUACUAm6ACUUGAUCAACAAUGAAUUCAAAAUAGUUAACCUAUGAAAUAACAYCCUCUCAAAUGUUUGCUGAUGAAGUACAAGUUGAAAUGUAGUUAUUGGAAAAGUCUGUAACCUGUGGAUCAUAUAUAUUCAAAGUGAGACAAAGGCAAAUAAAAAGCAGCUAUUUUCAUGAAUAGACAAAGUUGAUUUCAGGAAGUAUAAAUUAUAUUCUGCACCGAACAAGGAACAGAAAUUAUUGCAUCUGUGGAACAUAUAUCUGGAGUUACUAUACUYUACUGAAGAGCAAGGCAUAAAUUUAGACUAAAAUCCAYCCAGAUUACACUCAUUCUYUAGGCUACUCCUGGAUACUUCAUUUAAAUUUGAUUUUCGAGGUAGUGAGAUGUCGGCAAGGUUUGUCCUGUAUAUUAGGAAUAAAGGAAAAGUUCUAAACUGCCUCUGCAAUGACUUGUAGUCAGUGGAAGAGUAUCACUUUCCCCUGAUCAUGACCACUAAACUGUAAAUUGAUAUAAAUUAGUUUUCUCUCGAGUUACACCCAAGUAAUGAAGACUUAAGAGAACCUUGGUUGAAAUAAAUUUCCAAUAGUUUGGAGACUCAUAAAUACCAUGCAGGUGUAACCACUGCCAAUAGGCUGUUUCUAUGCUUAUUUCCUAUUUUGAUUUUUACUUUGAAGAUAGGAAUAUCUAAAUUAUAUCUCUAGGGAGAAAAUGUUGUAAAAAAUUAAAAGUACAYCCCUGAUUGUAAAAUAAAGUUCAAAAAACUGAUUUCAGAAAGUCUCAACUACCAAAUGUUUUCAAUAUAUUAGUUUUGAGAUGCUAGGAUUAUACUGUGAUUCUUAUGUUUAUAGUAAAGUCUGGAAAGCAGAAGGAUAGUUUUUUUAGCCUGGAAACUUAUUUAUGUUGCCUUGGUGAGUCUUCUAUCAUUUUUUAAAAAUUUAGCUUAUUGAACUGUAAAAUAGCUUUUCUAGUAUGAGAGAUGUUUUGAAUUUAAAAAAUGAAAUGCAGUUUUUCAAAAAUAAAUUUCCUUUGGAAAUUCUUGCAUAUCAAUUUAGUAAGGUUUUAUAAAAUUUUACAAUUUGAUAAAGUAUC
Sequence (MODOMICS CODE ENCODING)	GAGGUGAUAAGAUAGCAUCUGCUGUGGCCAGGCAUCCCUGACACCUGACAAGAAAGUAAAGCCAAAAGUCAGCUGAAGAUAAUGGCCAUGGAGAUGUCUGUGGAGAGCCGUAAAAGCCAAUCAUGGCUGAGAUGCCUGCAGAAUCUCUGCCCAUGAGAACUCUGAGGCCUCCUUUCCUUUGGCUGUGGUAAGCCCUCUGGGAAAAGAGCAGCUACCCACCACCAGCCGCUUGAUGGCAUUGAAACGAAUGGGAAUUGUAAGCGACUAUGAGAAAAUCCGUACCUUUGCCGUAGCAAUAGUAGGUGUUGGUGGAGUAGGUAGUGUGACUGCUGAAAUGCUGACAAGAUGUGGCAUUGGUAAGUUGCUACUCUUUGAUUAUGACAAGGUGGAACUAGCCAAUAUGAAUAGACUUUUCUUCCAACCUCAUCAAGCAGGAUUAAGUAAAGUUCAAGCAGCAGAACAUACUCUGAGGAACAUUAAUCCUGAUGUUCUUUUUGAAGUACACAACUAUAAUAUAACCACAGUGGAAAACUUUCAACAUUUCAUGGAUAGAAUAAGUAAUGGUGGGUUAGAAGAAGGAAAACCUGUUGAUCUAGUUCUUAGCUGUGUGGACAAUUUUGAAGCUCGAAUGACAAUAAAUACAGCUUGUAAUGAACUUGGACAAACAUGGAUGGAAUCUGGGGUCAGUGAAAAUGCAGUUUCAGGGCAUAUACAGCUUAUAAUUCCUGGAGAAUCUGCUUGUUUUGCGUGUGCUCCACCACUUGUAGUUGCUGCAAAUAUUGAUGAAAAGACUCUGAAACGAGAAGGUGUUUGUGCAGCCAGUCUUCCUACCACUAUGGGUGUGGUUGCUGGGAUCUUAGUACAAAACGUGUUAAAGUUUCUGUUAAAUUUUGGUACUGUUAGUUUUUACCUUGGAUACAAUGCAAUGCAGGAUUUUUUUCCUACUAUGUCCAUGAAGCCAAAUCCUCAGUGUGAUGACAGAAAUUGCAGGAAGCAGCAGGAGGAAUAUAAGAAAAAGGUAGCAGCACUGCCUAA2000000006ACAAGAGGUUAUACAAGAAGAGGAAGAGAUAAUCCAUGAAGAUAAUGAAUGGGGUAUUGAGCUGGUAUCUGAGGUUUCAGAAGAGGAACUGAAAAAUUUUUCAGGUCCAGUUCCAGACUUACCUGAAGGAAUUACAGUGGCAUACACAAUUCCAAAAAAGCAAGAAGAUUCUGUCACUGAGUUAACAGUGGAAGAUUCUGGUGAAAGCUUGGAAGACCUCAUGGCCAAAAUGAAGAAUAUGUAGAUAAUGG2000000006ACUGGGAUAUAUUGUAUUUCUCAUGUUAAAGCCUCUUCCCUUGAAAUUAAAAAAAAAUUUUAACUGAUAAAACUUAGGGCAACAUUAAUUAAUGUAUAUUCUUACCUGAAUUGUUAUACUUUUUGAAAAUCCUGUGACUUGCCUGUUUCUCCCCGCUCCAACGAAAUCAUUA2000000006ACUCUCCUAAAAUGUGUUUCAUUCUAGUAAGAAAACCUCAAAGGAUAUUGUAGGAUAUAAAUCUUACUUGAAAACAUAGCUGUUGAAAUGUUUUGGCCUUUUGGAGUGGGGGAAGGACAAAUCUGAUCCUGUAAUCUUUUUCUUUCCAGUAAUCCCUUGUGUCUGUUGCAUGAGGACAUGG2000000006ACAAUAAAGUAGUAUAUGAUCCUCAGAUACAGGGAGAAGGACAAGGCAUACAGCUUAUUGAUUAGAGCUGGCAAGCAUCUGCUCAUUAUGUUUGGAAUUGCUUUCUAUAAGAAAAUUGCCCA2000000090CUACUACUA2000000006ACUUGAUCAACAAUGAAUUCAAAAUAGUUAACCUAUGAAAUAACA2000000009UCCUCUCAAAUGUUUGCUGAUGAAGUACAAGUUGAAAUGUAGUUAUUGGAAAAGUCUGUAACCUGUGGAUCAUAUAUAUUCAAAGUGAGACAAAGGCAAAUAAAAAGCAGCUAUUUUCAUGAAUAGACAAAGUUGAUUUCAGGAAGUAUAAAUUAUAUUCUGCACCGAACAAGGAACAGAAAUUAUUGCAUCUGUGGAACAUAUAUCUGGAGUUACUAUACU2000000009UUACUGAAGAGCAAGGCAUAAAUUUAGACUAAAAUCCA2000000009UCCAGAUUACACUCAUUCU2000000009UUAGGCUACUCCUGGAUACUUCAUUUAAAUUUGAUUUUCGAGGUAGUGAGAUGUCGGCAAGGUUUGUCCUGUAUAUUAGGAAUAAAGGAAAAGUUCUAAACUGCCUCUGCAAUGACUUGUAGUCAGUGGAAGAGUAUCACUUUCCCCUGAUCAUGACCACUAAACUGUAAAUUGAUAUAAAUUAGUUUUCUCUCGAGUUACACCCAAGUAAUGAAGACUUAAGAGAACCUUGGUUGAAAUAAAUUUCCAAUAGUUUGGAGACUCAUAAAUACCAUGCAGGUGUAACCACUGCCAAUAGGCUGUUUCUAUGCUUAUUUCCUAUUUUGAUUUUUACUUUGAAGAUAGGAAUAUCUAAAUUAUAUCUCUAGGGAGAAAAUGUUGUAAAAAAUUAAAAGUACA2000000009UCCCUGAUUGUAAAAUAAAGUUCAAAAAACUGAUUUCAGAAAGUCUCAACUACCAAAUGUUUUCAAUAUAUUAGUUUUGAGAUGCUAGGAUUAUACUGUGAUUCUUAUGUUUAUAGUAAAGUCUGGAAAGCAGAAGGAUAGUUUUUUUAGCCUGGAAACUUAUUUAUGUUGCCUUGGUGAGUCUUCUAUCAUUUUUUAAAAAUUUAGCUUAUUGAACUGUAAAAUAGCUUUUCUAGUAUGAGAGAUGUUUUGAAUUUAAAAAAUGAAAUGCAGUUUUUCAAAAAUAAAUUUCCUUUGGAAAUUCUUGCAUAUCAAUUUAGUAAGGUUUUAUAAAAUUUUACAAUUUGAUAAAGUAUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1036	1287	1459	1640	1762	1771	1816	2038	2076	2095	2494
Modification Positions	m6A	m6A	m6A	m6A	Cm	m6A	Y	Y	Y	Y	Y
Genomic Coordinates	3:132675628:+	3:132676534:+	3:132676706:+	3:132676887:+	3:132677009:+	3:132677018:+	3:132677063:+	3:132677285:+	3:132677323:+	3:132677342:+	3:132677741:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 JkWoGWVwjNda	BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP