General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000462030
Gene ID:	ENSG00000163755
Gene Name:	HPS3
Sequence (UNICHARACTER ENCODING)	GGAAGUAGUCCUACAUUCGCGGUCAGCGCGGGGUCUCCGGGCGCCCUGCAGGGCGGGCAGGCUGUGCCAUCCCGCCGGЖCGUCGGGAUGGUGCAGCUGUACAACCUGCACCCGUUCGGGUCGCAGCAGGUGGUGCCCUGCAAGCUGGAGCCGGACCGGUUCUGUGGCGGGGGGCGUGACGCGCUUUUCGUGGCGGCGGGCUGCAAGGUGGAGGCGUUCGCGGUGGCCGGCCAGGAGCUGUGCCAGCCGCGGUGCGCCUUCUCCACGCUGGGCCGGGUGUUGCGCCUGGCCUACAGCGAGGCUGGUGAGUAAUCUAGAGAGCCAGGGGCCGCCUGGGGUCCAGCUUGAGGCCUCCUAGCUAGCGGACCGAACGUCUGGGCUGUAGCUCUAGCUAGGGAUGGGЖCUUCUUGCUUCCCGGAAUUUGCCGGAUGGUCUCCCUGGGUCUGGCCGCUGAUUGCUUGAAGUCGCAUUGAGCUAUGCGGUUGUCGCGGCAAGCAUAGGUAUGAGCUUGCUUCUGUCGGGGCGGAGACGCUGACAUCUCUUCGUCUUGGUUUUCUGCAGAAAGGCCUCUGGCUGGAUUCCACUCAUCUCGGAUACUUAAGCAAACAACAACAAAAAACUCUUUAGUGCAUCAGAUUUCAAAGACUUACCAAAAAAACAAGUAGGAAUAAGGAGACUAGUACUGUAUCCCGGAACCUCCAAGUACUCCCAGCUUUAACAAUUAUUCCAACUCUUGGCAGUUCUUUCACAUCUGUACCUCCAUCUACUUCCGGUCGGUUUUUGAAAGCUCACAUUAUGUGUUGAUUUUUAAAUGUGUGAGAUUAUUUGGUAGCAAUUGAAGAGAAAAACAAAGCUACAUUUCUACGUGCUUAUGUGAACUGGAGAAAUAAAAGGЖCUGAAAACUCUCGUGUGUGUAUCCGAAUGAUUGGGCAUAAUGUGGAGGGACCAUUCAGCAAAGCCUUCAGAGACCAGAUGUACAUUAUUGAAAUGCCGCUUUCGGAGGCCCCCUUGUGCAUUUCCUGUUGCCCUGUGAAAGGAGACCUUCUCGUUGGCUGCACAAAUAAAUUAGUCUUAUUUAGUUUGAAGUACCAGAUCAUUAAUGAGGAAUUCUCACUAUUGGЖCUUUGAЖCGUUCUUUAAUUAUACACAUAGAUAAUAUCACUCCUGUUGAGGUUUCUUUUUGUGUUGGAUAUGUUGCUGUCAUGUCAGACUUAGAAGUCUUAAUCGUAAAACUGGAGUCAGGCCCUAAAAAUGGAGAGAGAGUUCACCACCAUCCACAUAAGACCAACAAUCGAAUAAGACGGACAGAAGAAGGCAUCAGUAAUGAAAUUUCACAGCUUGAGUCAGAUGAUUUUGUCAUCUGCCAGAAGCCCCUGGAACUUCUUGGUGAAAAAAGUGAACAGUCUGGAUUAUCUGUUACACUGGAGUCUACGGGAUUAGCUGAUGAAAAAAGAAAAUAUUCCCACUUUCAGCACCUGCUCUAUAGACGUUUUGCUCCUGAUAUUUCGUCCUAUGUCUUGUCUGAUGACAUCAAGCUACAUUCCCUCCAGCUGCUACCCAUUUACCAGACCGGUUCUCUUACAUCUGAUGGAAAAAAUUUGUCUCAGGAAAAAGAAUUGCUGAGUCUCUUUUGCUUUUUCUCCUUACCUCAUGUGGGCUAUCUCUACAUGGUUGUCAAAUCUGUUGAAUUGAUGUCAGUCUACCAGUAUCCUGAAAAGUCUCAGCAGGCAGUACUCACGCCACAAUUUUUGCACGUCAUUACAAGUAACAACCUGCAGUGUUUCACUGUGCGGUGCAGUGCGGCGGCAGCUCGUGAGGAGGACCCGUACAUGGACACCACCCUGAAGGCUUGCCCACCUGUCAGUAUGGAUGUCUGUGCUPUAAGAAUACAGCUUUUCAUAGGCUUGAAAGCCAUCUGUCACUPUAAAAACCACAUCAUACUUUUGACUAAAGCAGAACCUGAAGCCAUUCCAGAGAGAAGACAGUCACCCAAGAGGCUUCUGUAAGCAUCCCCUUGCCCCAGGCAUUCCUGCCAGUUUCUGGAAUGAGUUGUAACUGGUAUAUUUUGUGUUUAUCUUUUUUCAAAUCAUAACUUGGAAUGAUCAAAUGGCUUUUUUAUGGUGGUCUUUUUCCAGAGAAAGAAAAGAAGGUUCUAACAAUCUCUGUAAUACACUUUAUAACUGACCUGGAAACUUUUAGGAGAAAAUGGAUUAUAAAAUAGUUUCAGUAAAAAUCAAAGGUGUUUUAGAUUAGUUAAAGGCCAUGCUUUUCUGUGUAAUUAAUGAGAAAGACUGAGCCUAUAAUGCUAAUUGAAACUACAGGACUUUUUACUGUCUUUCUUCUUUGACCCUUUCAGUUGUUACAUUUUUAUCUAAAAUUAUUUUCUGAUAUUAUGAAAGAAAUUAAUAAUGUAUGUCUUACCUUAAAGCACAUUUAUGAUCUAUAGAUAUGUGCUCAUGUAUCUGAAAAUAAAGUUGUAUUUUGAUAAC
Sequence (SHORT NAMES ENCODING)	GGAAGUAGUCCUACAUUCGCGGUCAGCGCGGGGUCUCCGGGCGCCCUGCAGGGCGGGCAGGCUGUGCCAUCCCGCCGGm6ACGUCGGGAUGGUGCAGCUGUACAACCUGCACCCGUUCGGGUCGCAGCAGGUGGUGCCCUGCAAGCUGGAGCCGGACCGGUUCUGUGGCGGGGGGCGUGACGCGCUUUUCGUGGCGGCGGGCUGCAAGGUGGAGGCGUUCGCGGUGGCCGGCCAGGAGCUGUGCCAGCCGCGGUGCGCCUUCUCCACGCUGGGCCGGGUGUUGCGCCUGGCCUACAGCGAGGCUGGUGAGUAAUCUAGAGAGCCAGGGGCCGCCUGGGGUCCAGCUUGAGGCCUCCUAGCUAGCGGACCGAACGUCUGGGCUGUAGCUCUAGCUAGGGAUGGGm6ACUUCUUGCUUCCCGGAAUUUGCCGGAUGGUCUCCCUGGGUCUGGCCGCUGAUUGCUUGAAGUCGCAUUGAGCUAUGCGGUUGUCGCGGCAAGCAUAGGUAUGAGCUUGCUUCUGUCGGGGCGGAGACGCUGACAUCUCUUCGUCUUGGUUUUCUGCAGAAAGGCCUCUGGCUGGAUUCCACUCAUCUCGGAUACUUAAGCAAACAACAACAAAAAACUCUUUAGUGCAUCAGAUUUCAAAGACUUACCAAAAAAACAAGUAGGAAUAAGGAGACUAGUACUGUAUCCCGGAACCUCCAAGUACUCCCAGCUUUAACAAUUAUUCCAACUCUUGGCAGUUCUUUCACAUCUGUACCUCCAUCUACUUCCGGUCGGUUUUUGAAAGCUCACAUUAUGUGUUGAUUUUUAAAUGUGUGAGAUUAUUUGGUAGCAAUUGAAGAGAAAAACAAAGCUACAUUUCUACGUGCUUAUGUGAACUGGAGAAAUAAAAGGm6ACUGAAAACUCUCGUGUGUGUAUCCGAAUGAUUGGGCAUAAUGUGGAGGGACCAUUCAGCAAAGCCUUCAGAGACCAGAUGUACAUUAUUGAAAUGCCGCUUUCGGAGGCCCCCUUGUGCAUUUCCUGUUGCCCUGUGAAAGGAGACCUUCUCGUUGGCUGCACAAAUAAAUUAGUCUUAUUUAGUUUGAAGUACCAGAUCAUUAAUGAGGAAUUCUCACUAUUGGm6ACUUUGAm6ACGUUCUUUAAUUAUACACAUAGAUAAUAUCACUCCUGUUGAGGUUUCUUUUUGUGUUGGAUAUGUUGCUGUCAUGUCAGACUUAGAAGUCUUAAUCGUAAAACUGGAGUCAGGCCCUAAAAAUGGAGAGAGAGUUCACCACCAUCCACAUAAGACCAACAAUCGAAUAAGACGGACAGAAGAAGGCAUCAGUAAUGAAAUUUCACAGCUUGAGUCAGAUGAUUUUGUCAUCUGCCAGAAGCCCCUGGAACUUCUUGGUGAAAAAAGUGAACAGUCUGGAUUAUCUGUUACACUGGAGUCUACGGGAUUAGCUGAUGAAAAAAGAAAAUAUUCCCACUUUCAGCACCUGCUCUAUAGACGUUUUGCUCCUGAUAUUUCGUCCUAUGUCUUGUCUGAUGACAUCAAGCUACAUUCCCUCCAGCUGCUACCCAUUUACCAGACCGGUUCUCUUACAUCUGAUGGAAAAAAUUUGUCUCAGGAAAAAGAAUUGCUGAGUCUCUUUUGCUUUUUCUCCUUACCUCAUGUGGGCUAUCUCUACAUGGUUGUCAAAUCUGUUGAAUUGAUGUCAGUCUACCAGUAUCCUGAAAAGUCUCAGCAGGCAGUACUCACGCCACAAUUUUUGCACGUCAUUACAAGUAACAACCUGCAGUGUUUCACUGUGCGGUGCAGUGCGGCGGCAGCUCGUGAGGAGGACCCGUACAUGGACACCACCCUGAAGGCUUGCCCACCUGUCAGUAUGGAUGUCUGUGCUYUAAGAAUACAGCUUUUCAUAGGCUUGAAAGCCAUCUGUCACUYUAAAAACCACAUCAUACUUUUGACUAAAGCAGAACCUGAAGCCAUUCCAGAGAGAAGACAGUCACCCAAGAGGCUUCUGUAAGCAUCCCCUUGCCCCAGGCAUUCCUGCCAGUUUCUGGAAUGAGUUGUAACUGGUAUAUUUUGUGUUUAUCUUUUUUCAAAUCAUAACUUGGAAUGAUCAAAUGGCUUUUUUAUGGUGGUCUUUUUCCAGAGAAAGAAAAGAAGGUUCUAACAAUCUCUGUAAUACACUUUAUAACUGACCUGGAAACUUUUAGGAGAAAAUGGAUUAUAAAAUAGUUUCAGUAAAAAUCAAAGGUGUUUUAGAUUAGUUAAAGGCCAUGCUUUUCUGUGUAAUUAAUGAGAAAGACUGAGCCUAUAAUGCUAAUUGAAACUACAGGACUUUUUACUGUCUUUCUUCUUUGACCCUUUCAGUUGUUACAUUUUUAUCUAAAAUUAUUUUCUGAUAUUAUGAAAGAAAUUAAUAAUGUAUGUCUUACCUUAAAGCACAUUUAUGAUCUAUAGAUAUGUGCUCAUGUAUCUGAAAAUAAAGUUGUAUUUUGAUAAC
Sequence (MODOMICS CODE ENCODING)	GGAAGUAGUCCUACAUUCGCGGUCAGCGCGGGGUCUCCGGGCGCCCUGCAGGGCGGGCAGGCUGUGCCAUCCCGCCGG2000000006ACGUCGGGAUGGUGCAGCUGUACAACCUGCACCCGUUCGGGUCGCAGCAGGUGGUGCCCUGCAAGCUGGAGCCGGACCGGUUCUGUGGCGGGGGGCGUGACGCGCUUUUCGUGGCGGCGGGCUGCAAGGUGGAGGCGUUCGCGGUGGCCGGCCAGGAGCUGUGCCAGCCGCGGUGCGCCUUCUCCACGCUGGGCCGGGUGUUGCGCCUGGCCUACAGCGAGGCUGGUGAGUAAUCUAGAGAGCCAGGGGCCGCCUGGGGUCCAGCUUGAGGCCUCCUAGCUAGCGGACCGAACGUCUGGGCUGUAGCUCUAGCUAGGGAUGGG2000000006ACUUCUUGCUUCCCGGAAUUUGCCGGAUGGUCUCCCUGGGUCUGGCCGCUGAUUGCUUGAAGUCGCAUUGAGCUAUGCGGUUGUCGCGGCAAGCAUAGGUAUGAGCUUGCUUCUGUCGGGGCGGAGACGCUGACAUCUCUUCGUCUUGGUUUUCUGCAGAAAGGCCUCUGGCUGGAUUCCACUCAUCUCGGAUACUUAAGCAAACAACAACAAAAAACUCUUUAGUGCAUCAGAUUUCAAAGACUUACCAAAAAAACAAGUAGGAAUAAGGAGACUAGUACUGUAUCCCGGAACCUCCAAGUACUCCCAGCUUUAACAAUUAUUCCAACUCUUGGCAGUUCUUUCACAUCUGUACCUCCAUCUACUUCCGGUCGGUUUUUGAAAGCUCACAUUAUGUGUUGAUUUUUAAAUGUGUGAGAUUAUUUGGUAGCAAUUGAAGAGAAAAACAAAGCUACAUUUCUACGUGCUUAUGUGAACUGGAGAAAUAAAAGG2000000006ACUGAAAACUCUCGUGUGUGUAUCCGAAUGAUUGGGCAUAAUGUGGAGGGACCAUUCAGCAAAGCCUUCAGAGACCAGAUGUACAUUAUUGAAAUGCCGCUUUCGGAGGCCCCCUUGUGCAUUUCCUGUUGCCCUGUGAAAGGAGACCUUCUCGUUGGCUGCACAAAUAAAUUAGUCUUAUUUAGUUUGAAGUACCAGAUCAUUAAUGAGGAAUUCUCACUAUUGG2000000006ACUUUGA2000000006ACGUUCUUUAAUUAUACACAUAGAUAAUAUCACUCCUGUUGAGGUUUCUUUUUGUGUUGGAUAUGUUGCUGUCAUGUCAGACUUAGAAGUCUUAAUCGUAAAACUGGAGUCAGGCCCUAAAAAUGGAGAGAGAGUUCACCACCAUCCACAUAAGACCAACAAUCGAAUAAGACGGACAGAAGAAGGCAUCAGUAAUGAAAUUUCACAGCUUGAGUCAGAUGAUUUUGUCAUCUGCCAGAAGCCCCUGGAACUUCUUGGUGAAAAAAGUGAACAGUCUGGAUUAUCUGUUACACUGGAGUCUACGGGAUUAGCUGAUGAAAAAAGAAAAUAUUCCCACUUUCAGCACCUGCUCUAUAGACGUUUUGCUCCUGAUAUUUCGUCCUAUGUCUUGUCUGAUGACAUCAAGCUACAUUCCCUCCAGCUGCUACCCAUUUACCAGACCGGUUCUCUUACAUCUGAUGGAAAAAAUUUGUCUCAGGAAAAAGAAUUGCUGAGUCUCUUUUGCUUUUUCUCCUUACCUCAUGUGGGCUAUCUCUACAUGGUUGUCAAAUCUGUUGAAUUGAUGUCAGUCUACCAGUAUCCUGAAAAGUCUCAGCAGGCAGUACUCACGCCACAAUUUUUGCACGUCAUUACAAGUAACAACCUGCAGUGUUUCACUGUGCGGUGCAGUGCGGCGGCAGCUCGUGAGGAGGACCCGUACAUGGACACCACCCUGAAGGCUUGCCCACCUGUCAGUAUGGAUGUCUGUGCU2000000009UUAAGAAUACAGCUUUUCAUAGGCUUGAAAGCCAUCUGUCACU2000000009UUAAAAACCACAUCAUACUUUUGACUAAAGCAGAACCUGAAGCCAUUCCAGAGAGAAGACAGUCACCCAAGAGGCUUCUGUAAGCAUCCCCUUGCCCCAGGCAUUCCUGCCAGUUUCUGGAAUGAGUUGUAACUGGUAUAUUUUGUGUUUAUCUUUUUUCAAAUCAUAACUUGGAAUGAUCAAAUGGCUUUUUUAUGGUGGUCUUUUUCCAGAGAAAGAAAAGAAGGUUCUAACAAUCUCUGUAAUACACUUUAUAACUGACCUGGAAACUUUUAGGAGAAAAUGGAUUAUAAAAUAGUUUCAGUAAAAAUCAAAGGUGUUUUAGAUUAGUUAAAGGCCAUGCUUUUCUGUGUAAUUAAUGAGAAAGACUGAGCCUAUAAUGCUAAUUGAAACUACAGGACUUUUUACUGUCUUUCUUCUUUGACCCUUUCAGUUGUUACAUUUUUAUCUAAAAUUAUUUUCUGAUAUUAUGAAAGAAAUUAAUAAUGUAUGUCUUACCUUAAAGCACAUUUAUGAUCUAUAGAUAUGUGCUCAUGUAUCUGAAAAUAAAGUUGUAUUUUGAUAAC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	79	402	894	1120	1127	1878	1921
Modification Positions	m6A	m6A	m6A	m6A	m6A	Y	Y
Genomic Coordinates	3:149129716:+	3:149130039:+	3:149140081:+	3:149140307:+	3:149140314:+	3:149153527:+	3:149153570:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9 UKen6WEino9G bXBqJigD9oV3	8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML bXBqJigD9oV3	BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML	bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8