General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000690979
Gene ID:	ENSG00000291223
Gene Name:	FAM86DP
Sequence (UNICHARACTER ENCODING)	GGCCCCGCCCACGUCAUGGCGCCCGAGGAGAAUGCGGGGACCGAACUCUUGCUGCAGAGUUUCGAGCGCCGCUUCCUGGCGGCGCGCACGCUGCGCUCCUUCCCCUGGCAGGGGGGCGGCGGGCGAGCGGAGAGGCCCGCGGGGCUCGCGGGAGUCCAGGGGCAGACGGGAUGGGUCUCCGUGCUGAAACCCCCGGCGCUCCUGCCACAGCUUAGAAGCAAAGUUAAGAGACUCAUCAGAUUCUGAGCUGCUGCGGGAUAUUUUGCAGAAGACGUGCUGUAUUGCCCAGAAGCCAUCGUGUCGCUGGUCGGGAUCCUGCGGAGGCUGGCUGCCUGCUGGGAGCACCAGCAGUCUCCUGAGGUCUACGUGGCCUUUACCGUCCACAACCCAGAGACGUGCCAGCUGUUCACCACCGAGCUAGGCCGGGCUGGGAUCAUAUGGGAAGCGGAAGCUCAUCAUGACCAGAAЖCUGUUUCCCUAUGGAGAGCACUUGGAGAUGGCAAUGCUGAACCUCACACUGUAGGЖCUCACACACGACUCCAACGGGAUUGUGAGAAUCAAGUCAAUCUCAUGGGAAGAAUUUUUAUAUGGGAAAGCGGAUAAAЖCUUUCAUUGUACUGGAAUGUUUGGAGAAUGUUAAAUUCCAAAUCAGAAACCACAAЖCUGCCCUCUAAUAAGACAUCGGCUAUCUAAGCGUGUGGGUGCCCCCUUUCUGCCAGCAGUUCUGGUUCUUACGAAAAUCACCAUAUAUCAGACAUGAAAAUUCUGGCUUUGUGCAGAUAAAAAAGUGUGUAUCAAGUAUGACGUUCCCCCAAUGUGGЖCACACUUGGUUCCUCAGAAAGCCAAGCCCACUGCAGCUGCCACAUCCCUGGЖCACACUCGGUUCCUCACAAAGCCAAGCCCGCUGCAGCUGUCACAUCCCUGGЖCACACUCGGUUCCUCACAAAGCCAAGCCCACUGCAGCUGCCACAUCCCUGAGCCUAUGGUGCAGCAGGUGCUUUUUUCAAGACAGGGAUCAAAGUGUUAGGAACACGGCAGAAAGGUGACACCUGGAGACCAAAUGCAGGAUGAGGAGUACUGCAGAGGUCACAGGGAAGUCAGAGAЖCAGUAAUACGCUAACAGGGGCACGGGGCAUGAAGAACAAAAGACAGGAAGCGUUUCAGAGACUCCAAAGAAGAAAUCAGGGCCAACCACAGCUUCCCGGGUCAUUCACCAGGUGGCACCACUGCCGUCAUUUCAGCUUCUGGCCACUGGGAGGCGCUGCUCGAAAGGGUUUGCCCUGACACUCCAAGAAGCUGCGGGAAGGACAGCAGGGGCCCUGGGGUUUUAGCCUCUGGCCCAGGAGUUAUGUGUCCAUAACCAAAGGGAGCACAGUCUGCACCCAGCUCUCAUCCCAUCAGAGCUGCUGCGACUCCUGCAGGUUCUUCCGGAЖCUGGUUUAGCUUGCCUGCAGGAUCAGGAAAGUUUGAGAAAAGCAUCUGCAAAAUACUAAAGAGCAGAGCUUACCUCAUUGCCUGUCCCCACCCCAUCCCAGGUCACCACCUGGCUGACCCCAGGUCCCCGACCCAACAACAACCCCUCCCAAGUCCCUAACUCCCUCACUUGGЖCUUGAGACCCUUCACACCCCAGCAGCGCUCCGCCUCCCACUUGACAUCAUGCUUUCUGGAAACUUCCCCGUAUGUCCCACUUUCCCACACUUGGUGCCCUGGAGCACCUUCCGGCCUCUACAUGCUGUACGUUCCCCUGUGAGCACCCUCCUCUCGGCCUCUGGCCAACACAGUCCCACCCAUCUGUGGGUAACAAGGGGGAGUGGGUGUUCUUUUCAGCCUUGCUAAACUCUCUGAAUCAAGGAUCACAAACUACAGCCUGCAGGCCAAAUCCAGCCCACAGCCUGUGUUUGUAAAUAAAGCUUUAUUGGAAGAAAGCCACACCCCU
Sequence (SHORT NAMES ENCODING)	GGCCCCGCCCACGUCAUGGCGCCCGAGGAGAAUGCGGGGACCGAACUCUUGCUGCAGAGUUUCGAGCGCCGCUUCCUGGCGGCGCGCACGCUGCGCUCCUUCCCCUGGCAGGGGGGCGGCGGGCGAGCGGAGAGGCCCGCGGGGCUCGCGGGAGUCCAGGGGCAGACGGGAUGGGUCUCCGUGCUGAAACCCCCGGCGCUCCUGCCACAGCUUAGAAGCAAAGUUAAGAGACUCAUCAGAUUCUGAGCUGCUGCGGGAUAUUUUGCAGAAGACGUGCUGUAUUGCCCAGAAGCCAUCGUGUCGCUGGUCGGGAUCCUGCGGAGGCUGGCUGCCUGCUGGGAGCACCAGCAGUCUCCUGAGGUCUACGUGGCCUUUACCGUCCACAACCCAGAGACGUGCCAGCUGUUCACCACCGAGCUAGGCCGGGCUGGGAUCAUAUGGGAAGCGGAAGCUCAUCAUGACCAGAAm6ACUGUUUCCCUAUGGAGAGCACUUGGAGAUGGCAAUGCUGAACCUCACACUGUAGGm6ACUCACACACGACUCCAACGGGAUUGUGAGAAUCAAGUCAAUCUCAUGGGAAGAAUUUUUAUAUGGGAAAGCGGAUAAAm6ACUUUCAUUGUACUGGAAUGUUUGGAGAAUGUUAAAUUCCAAAUCAGAAACCACAAm6ACUGCCCUCUAAUAAGACAUCGGCUAUCUAAGCGUGUGGGUGCCCCCUUUCUGCCAGCAGUUCUGGUUCUUACGAAAAUCACCAUAUAUCAGACAUGAAAAUUCUGGCUUUGUGCAGAUAAAAAAGUGUGUAUCAAGUAUGACGUUCCCCCAAUGUGGm6ACACACUUGGUUCCUCAGAAAGCCAAGCCCACUGCAGCUGCCACAUCCCUGGm6ACACACUCGGUUCCUCACAAAGCCAAGCCCGCUGCAGCUGUCACAUCCCUGGm6ACACACUCGGUUCCUCACAAAGCCAAGCCCACUGCAGCUGCCACAUCCCUGAGCCUAUGGUGCAGCAGGUGCUUUUUUCAAGACAGGGAUCAAAGUGUUAGGAACACGGCAGAAAGGUGACACCUGGAGACCAAAUGCAGGAUGAGGAGUACUGCAGAGGUCACAGGGAAGUCAGAGAm6ACAGUAAUACGCUAACAGGGGCACGGGGCAUGAAGAACAAAAGACAGGAAGCGUUUCAGAGACUCCAAAGAAGAAAUCAGGGCCAACCACAGCUUCCCGGGUCAUUCACCAGGUGGCACCACUGCCGUCAUUUCAGCUUCUGGCCACUGGGAGGCGCUGCUCGAAAGGGUUUGCCCUGACACUCCAAGAAGCUGCGGGAAGGACAGCAGGGGCCCUGGGGUUUUAGCCUCUGGCCCAGGAGUUAUGUGUCCAUAACCAAAGGGAGCACAGUCUGCACCCAGCUCUCAUCCCAUCAGAGCUGCUGCGACUCCUGCAGGUUCUUCCGGAm6ACUGGUUUAGCUUGCCUGCAGGAUCAGGAAAGUUUGAGAAAAGCAUCUGCAAAAUACUAAAGAGCAGAGCUUACCUCAUUGCCUGUCCCCACCCCAUCCCAGGUCACCACCUGGCUGACCCCAGGUCCCCGACCCAACAACAACCCCUCCCAAGUCCCUAACUCCCUCACUUGGm6ACUUGAGACCCUUCACACCCCAGCAGCGCUCCGCCUCCCACUUGACAUCAUGCUUUCUGGAAACUUCCCCGUAUGUCCCACUUUCCCACACUUGGUGCCCUGGAGCACCUUCCGGCCUCUACAUGCUGUACGUUCCCCUGUGAGCACCCUCCUCUCGGCCUCUGGCCAACACAGUCCCACCCAUCUGUGGGUAACAAGGGGGAGUGGGUGUUCUUUUCAGCCUUGCUAAACUCUCUGAAUCAAGGAUCACAAACUACAGCCUGCAGGCCAAAUCCAGCCCACAGCCUGUGUUUGUAAAUAAAGCUUUAUUGGAAGAAAGCCACACCCCU
Sequence (MODOMICS CODE ENCODING)	GGCCCCGCCCACGUCAUGGCGCCCGAGGAGAAUGCGGGGACCGAACUCUUGCUGCAGAGUUUCGAGCGCCGCUUCCUGGCGGCGCGCACGCUGCGCUCCUUCCCCUGGCAGGGGGGCGGCGGGCGAGCGGAGAGGCCCGCGGGGCUCGCGGGAGUCCAGGGGCAGACGGGAUGGGUCUCCGUGCUGAAACCCCCGGCGCUCCUGCCACAGCUUAGAAGCAAAGUUAAGAGACUCAUCAGAUUCUGAGCUGCUGCGGGAUAUUUUGCAGAAGACGUGCUGUAUUGCCCAGAAGCCAUCGUGUCGCUGGUCGGGAUCCUGCGGAGGCUGGCUGCCUGCUGGGAGCACCAGCAGUCUCCUGAGGUCUACGUGGCCUUUACCGUCCACAACCCAGAGACGUGCCAGCUGUUCACCACCGAGCUAGGCCGGGCUGGGAUCAUAUGGGAAGCGGAAGCUCAUCAUGACCAGAA2000000006ACUGUUUCCCUAUGGAGAGCACUUGGAGAUGGCAAUGCUGAACCUCACACUGUAGG2000000006ACUCACACACGACUCCAACGGGAUUGUGAGAAUCAAGUCAAUCUCAUGGGAAGAAUUUUUAUAUGGGAAAGCGGAUAAA2000000006ACUUUCAUUGUACUGGAAUGUUUGGAGAAUGUUAAAUUCCAAAUCAGAAACCACAA2000000006ACUGCCCUCUAAUAAGACAUCGGCUAUCUAAGCGUGUGGGUGCCCCCUUUCUGCCAGCAGUUCUGGUUCUUACGAAAAUCACCAUAUAUCAGACAUGAAAAUUCUGGCUUUGUGCAGAUAAAAAAGUGUGUAUCAAGUAUGACGUUCCCCCAAUGUGG2000000006ACACACUUGGUUCCUCAGAAAGCCAAGCCCACUGCAGCUGCCACAUCCCUGG2000000006ACACACUCGGUUCCUCACAAAGCCAAGCCCGCUGCAGCUGUCACAUCCCUGG2000000006ACACACUCGGUUCCUCACAAAGCCAAGCCCACUGCAGCUGCCACAUCCCUGAGCCUAUGGUGCAGCAGGUGCUUUUUUCAAGACAGGGAUCAAAGUGUUAGGAACACGGCAGAAAGGUGACACCUGGAGACCAAAUGCAGGAUGAGGAGUACUGCAGAGGUCACAGGGAAGUCAGAGA2000000006ACAGUAAUACGCUAACAGGGGCACGGGGCAUGAAGAACAAAAGACAGGAAGCGUUUCAGAGACUCCAAAGAAGAAAUCAGGGCCAACCACAGCUUCCCGGGUCAUUCACCAGGUGGCACCACUGCCGUCAUUUCAGCUUCUGGCCACUGGGAGGCGCUGCUCGAAAGGGUUUGCCCUGACACUCCAAGAAGCUGCGGGAAGGACAGCAGGGGCCCUGGGGUUUUAGCCUCUGGCCCAGGAGUUAUGUGUCCAUAACCAAAGGGAGCACAGUCUGCACCCAGCUCUCAUCCCAUCAGAGCUGCUGCGACUCCUGCAGGUUCUUCCGGA2000000006ACUGGUUUAGCUUGCCUGCAGGAUCAGGAAAGUUUGAGAAAAGCAUCUGCAAAAUACUAAAGAGCAGAGCUUACCUCAUUGCCUGUCCCCACCCCAUCCCAGGUCACCACCUGGCUGACCCCAGGUCCCCGACCCAACAACAACCCCUCCCAAGUCCCUAACUCCCUCACUUGG2000000006ACUUGAGACCCUUCACACCCCAGCAGCGCUCCGCCUCCCACUUGACAUCAUGCUUUCUGGAAACUUCCCCGUAUGUCCCACUUUCCCACACUUGGUGCCCUGGAGCACCUUCCGGCCUCUACAUGCUGUACGUUCCCCUGUGAGCACCCUCCUCUCGGCCUCUGGCCAACACAGUCCCACCCAUCUGUGGGUAACAAGGGGGAGUGGGUGUUCUUUUCAGCCUUGCUAAACUCUCUGAAUCAAGGAUCACAAACUACAGCCUGCAGGCCAAAUCCAGCCCACAGCCUGUGUUUGUAAAUAAAGCUUUAUUGGAAGAAAGCCACACCCCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	468	524	603	659	817	869	921	1099	1426	1600
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	3:75423015:-	3:75422959:-	3:75422880:-	3:75422824:-	3:75422666:-	3:75422614:-	3:75422562:-	3:75422384:-	3:75422057:-	3:75421883:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 Yfn77uLS5tv8	Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL Yfn77uLS5tv8	Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8	msuJfBpJvM5H Lny8GcCeVGc9	6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	msuJfBpJvM5H VyCX26p5UBRL	5Nnepx5V7yHo 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	msuJfBpJvM5H VyCX26p5UBRL	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq	5Nnepx5V7yHo msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq