General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000610462
Gene ID:	ENSG00000114646
Gene Name:	CSPG5
Sequence (UNICHARACTER ENCODING)	GGGGAGGCGCGGCGCGCCGGGGACAGCGGCGGACGGCGGCGGCGGCGGCAUGCGGCUCCUCGCGCUGCCCAUCGUGGGCUGAGGCGGCCGCAGAACCGGCGGGAGGCGCGGCGGCCGGGCGAGCCGAGGGCGCAGCCAGCCGGGCGGACCGCGGACAGCGGUCGGGGCGCCGCGCCAUGGGGCGAGCCGGGGGCGGGGGCCCGGGCCGGGGGCCGCCGCCACUGCUGCUGUUUCUGGGGGCCGCGCUGGUCCUGGCCUCUGGGGCCGUGCCGGCGCGUGAGGCGGGCAGCGCGGUUGAGGCCGAAGAGCUGGUGAAGGGCAGCCCGGCGUGGGAGCCGCCUGCCAACGACACGCGGGAAGAAGCCGGCCCACCAGCGGCUGGGGAAGAUGAGGCGUCGUGGACGGCGCCCGGUGGCGAGCUGGCCGGGCCAGAAGAGGUGCUGCAGGAGUCGGCUGCGGUGACCGGCACCGCCUGGCUGGAAGCUGACAGCCCAGGCCUGGGAGGAGUGACCGCAGAGGCGGGCAGCGGCGAUGCCCAGGCCCUUCCAGCUACGCUCCAGGCUCCCCACGAGGUCCUCGGGCAGUCAAUCAUGCCCCCUGCCAUUCCUGAGGCUACAGAGGCCAGCGGGCCACCCUCCCCCACCCCCGGCGACAAGCUGAGCCCAGCUUCUGAЖCUCCCCAAGGAGAGCCCCUUGGAGGUUUGGCUGAЖCCUGGGGGGCAGCACACCCGACCCUCAAGGGCCAGAGCUGЖCUUACCCAUUUCAGGGCACCCUGGAGCCCCAACCGGCAUCAGAUAUCAUUGACAUCGACUACUUCGAAGGЖCUGGAUGGUGAGGGUCGUGGCGCAGAUCUGGGGAGCUUCCCAGGGUCACCAGGAACCUCAGAGAACCACCCUGAUACUGAGGGAGAGACCCCUUCCUGGAGCCUGCUUGЖCUUAUACGAUGAUUUCACCCCCUUCGAUGAAUCUGAUUUCUACCCCACCACAUCCUUUUAUGAUGACUUGGAUGAAGAGGAGGAGGAAGAGGAGGAUGACAAAGAUGCAGUAGGAGGUGGAGACCUAGAAGAUGAAAAUGAGCUUCUAGUGCCCACUGGGAAGCCUGGUCUGGGGCCCGGGЖCAGGCCAGCCCACCAGUCGGUGGCAUGCUGUCCCUCCACAGCACACUCUGGGGUCGGUCCCCGGCAGCAGCAUCGCCCUCAGGCCCCGCCCAGGAGAGCCAGGCAGGGЖCUUGGCCUCCAGUGAAAAUGGCACUGAGUGCCGCAGUGGCUUUGUGCGGCAUAACGGCUCCUGCCGGUCAGUGUGCGACCUCUUCCCAAGUUACUGUCACAAUGGCGGCCAGUGCUACCUGGUGGAGAACAUAGGGGCCUUCUGCAGGUGCAACACGCAGGACUACAUCUGGCACAAGGGGAUGCGCUGCGAGUCCAUCAUCACCGACUUCCAGGUGAUGUGCGUGGCCGUGGGCUCGGCUGCCCUCGUCCUGCUCCUGCUCUUCAUGAUGACGGUGUUCUUUGCCAAGAAGCUCUACCUGCUCAAGACGGAGAAUACCAAGCUGCGUAGGACCAAGAUGAUCCUAGUGCUCCCCACAAAAUCCAGGAGGUUCUCAAGUCCUGCCUGAAAGAGGAGGAGUCAUUUAACAUCCAGAACUCCAUGUCGCCCAAACUUGAGGGUGGCAAAGGUGACCAGGCUGACUUGGAUGUGAЖCUGUCUUCAGAAUAAUUUAACCUAAAGCAGAGCAAGAAGAGAGGAAGCGGGGGUAGUGGGUGGGGGGUAGGGGAAGAAACAUUAUCUCCUCUUGUACAGAGUCUAUUUCUUGUAACCAUUUGUUAAACUCUUUUCUUUUUCUGAUCUCAUGGCAUGCUUUUAUGUAUUUUGUACAGGAGGCAAAAAAAUACUUAAAAUAAGCAAAGAAACUGAACAGAAUUGCAUACAUUGGGUUGUUUUUUCUGUGCUGUCUGUACAUUGCUUCUGCUGCUGUGAUUUCUAAACCUGUGCUGUUAUUCAACUGACUUUUUUUUGUACUUUGACCCACGUUUUUUUGAAAUACCAGUAAAAAACAAAGUUCUUGAAAUAAAACUUUUU
Sequence (SHORT NAMES ENCODING)	GGGGAGGCGCGGCGCGCCGGGGACAGCGGCGGACGGCGGCGGCGGCGGCAUGCGGCUCCUCGCGCUGCCCAUCGUGGGCUGAGGCGGCCGCAGAACCGGCGGGAGGCGCGGCGGCCGGGCGAGCCGAGGGCGCAGCCAGCCGGGCGGACCGCGGACAGCGGUCGGGGCGCCGCGCCAUGGGGCGAGCCGGGGGCGGGGGCCCGGGCCGGGGGCCGCCGCCACUGCUGCUGUUUCUGGGGGCCGCGCUGGUCCUGGCCUCUGGGGCCGUGCCGGCGCGUGAGGCGGGCAGCGCGGUUGAGGCCGAAGAGCUGGUGAAGGGCAGCCCGGCGUGGGAGCCGCCUGCCAACGACACGCGGGAAGAAGCCGGCCCACCAGCGGCUGGGGAAGAUGAGGCGUCGUGGACGGCGCCCGGUGGCGAGCUGGCCGGGCCAGAAGAGGUGCUGCAGGAGUCGGCUGCGGUGACCGGCACCGCCUGGCUGGAAGCUGACAGCCCAGGCCUGGGAGGAGUGACCGCAGAGGCGGGCAGCGGCGAUGCCCAGGCCCUUCCAGCUACGCUCCAGGCUCCCCACGAGGUCCUCGGGCAGUCAAUCAUGCCCCCUGCCAUUCCUGAGGCUACAGAGGCCAGCGGGCCACCCUCCCCCACCCCCGGCGACAAGCUGAGCCCAGCUUCUGAm6ACUCCCCAAGGAGAGCCCCUUGGAGGUUUGGCUGAm6ACCUGGGGGGCAGCACACCCGACCCUCAAGGGCCAGAGCUGm6ACUUACCCAUUUCAGGGCACCCUGGAGCCCCAACCGGCAUCAGAUAUCAUUGACAUCGACUACUUCGAAGGm6ACUGGAUGGUGAGGGUCGUGGCGCAGAUCUGGGGAGCUUCCCAGGGUCACCAGGAACCUCAGAGAACCACCCUGAUACUGAGGGAGAGACCCCUUCCUGGAGCCUGCUUGm6ACUUAUACGAUGAUUUCACCCCCUUCGAUGAAUCUGAUUUCUACCCCACCACAUCCUUUUAUGAUGACUUGGAUGAAGAGGAGGAGGAAGAGGAGGAUGACAAAGAUGCAGUAGGAGGUGGAGACCUAGAAGAUGAAAAUGAGCUUCUAGUGCCCACUGGGAAGCCUGGUCUGGGGCCCGGGm6ACAGGCCAGCCCACCAGUCGGUGGCAUGCUGUCCCUCCACAGCACACUCUGGGGUCGGUCCCCGGCAGCAGCAUCGCCCUCAGGCCCCGCCCAGGAGAGCCAGGCAGGGm6ACUUGGCCUCCAGUGAAAAUGGCACUGAGUGCCGCAGUGGCUUUGUGCGGCAUAACGGCUCCUGCCGGUCAGUGUGCGACCUCUUCCCAAGUUACUGUCACAAUGGCGGCCAGUGCUACCUGGUGGAGAACAUAGGGGCCUUCUGCAGGUGCAACACGCAGGACUACAUCUGGCACAAGGGGAUGCGCUGCGAGUCCAUCAUCACCGACUUCCAGGUGAUGUGCGUGGCCGUGGGCUCGGCUGCCCUCGUCCUGCUCCUGCUCUUCAUGAUGACGGUGUUCUUUGCCAAGAAGCUCUACCUGCUCAAGACGGAGAAUACCAAGCUGCGUAGGACCAAGAUGAUCCUAGUGCUCCCCACAAAAUCCAGGAGGUUCUCAAGUCCUGCCUGAAAGAGGAGGAGUCAUUUAACAUCCAGAACUCCAUGUCGCCCAAACUUGAGGGUGGCAAAGGUGACCAGGCUGACUUGGAUGUGAm6ACUGUCUUCAGAAUAAUUUAACCUAAAGCAGAGCAAGAAGAGAGGAAGCGGGGGUAGUGGGUGGGGGGUAGGGGAAGAAACAUUAUCUCCUCUUGUACAGAGUCUAUUUCUUGUAACCAUUUGUUAAACUCUUUUCUUUUUCUGAUCUCAUGGCAUGCUUUUAUGUAUUUUGUACAGGAGGCAAAAAAAUACUUAAAAUAAGCAAAGAAACUGAACAGAAUUGCAUACAUUGGGUUGUUUUUUCUGUGCUGUCUGUACAUUGCUUCUGCUGCUGUGAUUUCUAAACCUGUGCUGUUAUUCAACUGACUUUUUUUUGUACUUUGACCCACGUUUUUUUGAAAUACCAGUAAAAAACAAAGUUCUUGAAAUAAAACUUUUU
Sequence (MODOMICS CODE ENCODING)	GGGGAGGCGCGGCGCGCCGGGGACAGCGGCGGACGGCGGCGGCGGCGGCAUGCGGCUCCUCGCGCUGCCCAUCGUGGGCUGAGGCGGCCGCAGAACCGGCGGGAGGCGCGGCGGCCGGGCGAGCCGAGGGCGCAGCCAGCCGGGCGGACCGCGGACAGCGGUCGGGGCGCCGCGCCAUGGGGCGAGCCGGGGGCGGGGGCCCGGGCCGGGGGCCGCCGCCACUGCUGCUGUUUCUGGGGGCCGCGCUGGUCCUGGCCUCUGGGGCCGUGCCGGCGCGUGAGGCGGGCAGCGCGGUUGAGGCCGAAGAGCUGGUGAAGGGCAGCCCGGCGUGGGAGCCGCCUGCCAACGACACGCGGGAAGAAGCCGGCCCACCAGCGGCUGGGGAAGAUGAGGCGUCGUGGACGGCGCCCGGUGGCGAGCUGGCCGGGCCAGAAGAGGUGCUGCAGGAGUCGGCUGCGGUGACCGGCACCGCCUGGCUGGAAGCUGACAGCCCAGGCCUGGGAGGAGUGACCGCAGAGGCGGGCAGCGGCGAUGCCCAGGCCCUUCCAGCUACGCUCCAGGCUCCCCACGAGGUCCUCGGGCAGUCAAUCAUGCCCCCUGCCAUUCCUGAGGCUACAGAGGCCAGCGGGCCACCCUCCCCCACCCCCGGCGACAAGCUGAGCCCAGCUUCUGA2000000006ACUCCCCAAGGAGAGCCCCUUGGAGGUUUGGCUGA2000000006ACCUGGGGGGCAGCACACCCGACCCUCAAGGGCCAGAGCUG2000000006ACUUACCCAUUUCAGGGCACCCUGGAGCCCCAACCGGCAUCAGAUAUCAUUGACAUCGACUACUUCGAAGG2000000006ACUGGAUGGUGAGGGUCGUGGCGCAGAUCUGGGGAGCUUCCCAGGGUCACCAGGAACCUCAGAGAACCACCCUGAUACUGAGGGAGAGACCCCUUCCUGGAGCCUGCUUG2000000006ACUUAUACGAUGAUUUCACCCCCUUCGAUGAAUCUGAUUUCUACCCCACCACAUCCUUUUAUGAUGACUUGGAUGAAGAGGAGGAGGAAGAGGAGGAUGACAAAGAUGCAGUAGGAGGUGGAGACCUAGAAGAUGAAAAUGAGCUUCUAGUGCCCACUGGGAAGCCUGGUCUGGGGCCCGGG2000000006ACAGGCCAGCCCACCAGUCGGUGGCAUGCUGUCCCUCCACAGCACACUCUGGGGUCGGUCCCCGGCAGCAGCAUCGCCCUCAGGCCCCGCCCAGGAGAGCCAGGCAGGG2000000006ACUUGGCCUCCAGUGAAAAUGGCACUGAGUGCCGCAGUGGCUUUGUGCGGCAUAACGGCUCCUGCCGGUCAGUGUGCGACCUCUUCCCAAGUUACUGUCACAAUGGCGGCCAGUGCUACCUGGUGGAGAACAUAGGGGCCUUCUGCAGGUGCAACACGCAGGACUACAUCUGGCACAAGGGGAUGCGCUGCGAGUCCAUCAUCACCGACUUCCAGGUGAUGUGCGUGGCCGUGGGCUCGGCUGCCCUCGUCCUGCUCCUGCUCUUCAUGAUGACGGUGUUCUUUGCCAAGAAGCUCUACCUGCUCAAGACGGAGAAUACCAAGCUGCGUAGGACCAAGAUGAUCCUAGUGCUCCCCACAAAAUCCAGGAGGUUCUCAAGUCCUGCCUGAAAGAGGAGGAGUCAUUUAACAUCCAGAACUCCAUGUCGCCCAAACUUGAGGGUGGCAAAGGUGACCAGGCUGACUUGGAUGUGA2000000006ACUGUCUUCAGAAUAAUUUAACCUAAAGCAGAGCAAGAAGAGAGGAAGCGGGGGUAGUGGGUGGGGGGUAGGGGAAGAAACAUUAUCUCCUCUUGUACAGAGUCUAUUUCUUGUAACCAUUUGUUAAACUCUUUUCUUUUUCUGAUCUCAUGGCAUGCUUUUAUGUAUUUUGUACAGGAGGCAAAAAAAUACUUAAAAUAAGCAAAGAAACUGAACAGAAUUGCAUACAUUGGGUUGUUUUUUCUGUGCUGUCUGUACAUUGCUUCUGCUGCUGUGAUUUCUAAACCUGUGCUGUUAUUCAACUGACUUUUUUUUGUACUUUGACCCACGUUUUUUUGAAAUACCAGUAAAAAACAAAGUUCUUGAAAUAAAACUUUUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	674	709	750	821	931	1113	1222	1695
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	3:47577528:-	3:47577493:-	3:47577452:-	3:47577381:-	3:47577271:-	3:47577089:-	3:47576980:-	3:47562625:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H V5PvfiKsgFMd VyCX26p5UBRL BkoLW2CBToyL Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Yfn77uLS5tv8	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb Ap2q43bQLNek gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL Yfn77uLS5tv8	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn VL7zkHvkfkoB VyCX26p5UBRL dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL Yfn77uLS5tv8	msuJfBpJvM5H nGifePrmgHfe VyCX26p5UBRL BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8