General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000295839
Gene ID:	ENSG00000163590
Gene Name:	PPM1L
Sequence (UNICHARACTER ENCODING)	GGGUAGGAGGGAUGCUGGUGCCAUUAGCAGAGAGGGCUAGACCAGAACAUGCCUGCUUUUUCAACAACUGCAGCUGAAUAUGUAAAAUCUCGACUCCCAGAGGCCCUUAAACAGCAUCUUCAGGACUACGAGAAAGACAAAGAAAAUAGUGUAUUAUCUUACCAGACCAUCCUUGAACAGCAGAUUUUGUCAAUUGACCGAGAAAUGCUAGAAAAAUUGACUGUAUCCUAUGAUGAAGCAGGCACAACGUGUUUGAUUGCUCUGCUAUCAGAUAAAGACCUCACUGUGGCCAACGUGGGUGACUCGCGCGGGGUCCUGUGUGACAAAGAUGGGAACGCUAUUCCUUUGUCUCAUGAUCACAAGCCUUACCAGUUGAAGGAAAGAAAGAGGAUAAAGAGAGCAGGUGGUUUCAUCAGUUUCAAUGGCUCCUGGAGGGUCCAGGGAAUCCUGGCCAUGUCUCGGUCCCUGGGGGAUUAUCCGCUGAAAAAUCUCAACGUGGUCAUCCCAGACCCAGACAUCCUGACCUUUGACCUGGЖCAAGCUUCAGCCUGAGUUCAUGAUCUUGGCAUCAGAUGGUCUCUGGGAUGCUUUCAGCAAUGAAGAAGCAGUUCGAUUCAUCAAGGAGCGCUUGGAUGAACCUCACUUUGGGGCCAAGAGCAUAGUUUUACAGUCAUUUUACAGAGGCUGCCCUGACAAUAUAACAGUCAUGGUGGUGAAGUUCAGAAAUAGCAGCAAAACAGAAGAGCAGUGAACCCUUCAGGGGUCUCAGCUGCCUUAGЖCUAAAGGЖCUUUCAACACACUGGUCUCUUUUAAUUUAGUGAAAAGUGUGGGAGUUGUAAUUAGGAUCAUCCACCCCAGACAUGGAAUCCCCCCUCCCUGGUGGUCUUAGGUCUAUAAUCAGUGACGAЖCAGAGGGUGCCCUUGGCCAAUGUAGUUAAGAAACUGGAAAAUGGUUUCUUCAUGUUUUCCCAACUCUUUCAUCCAGUGUCCAAAAUAUAUAAGUAAAUAGCUGUAGAGUCACAUAUAUGAAGUGAAUAGCAUAUGUGUCAUUUAGUCUCCCUGAAGAUUCUUUUCAAGAUCCUGUUCAGGGUCCUCCAGGCAUCAGCUGUUGUGUCCUCUCUUUGUAACAGUGGACAGGACAGACCACCCAGUGCUGCAGGAGACAGGCCACUGCGUCACCUGUGAGUGGUCAGGGGCUGAUGUGGCAACACCCUCUGCCAAGAGЖCAGAGCUGUCCUGAGAAUGCUUUGUCCUUCUGAGCCCAUGUUUUCUGCUCAGUAGCAGCUUGGAAGCAGAUUUGGAAUGGUUUACUAUUUUGGCUGCUCUUGGGGЖCUGCGAGAAGCAGAGAGAAUGAGAGACCAGUGGCAACUGCCUGCACAGCAGAGAUAACCCUCUUCCCUUGCUUCCUUUAAUAGUUAAAUAGЖCUUUGUAUACCACCUGACCAGCCUUUGUG
Sequence (SHORT NAMES ENCODING)	GGGUAGGAGGGAUGCUGGUGCCAUUAGCAGAGAGGGCUAGACCAGAACAUGCCUGCUUUUUCAACAACUGCAGCUGAAUAUGUAAAAUCUCGACUCCCAGAGGCCCUUAAACAGCAUCUUCAGGACUACGAGAAAGACAAAGAAAAUAGUGUAUUAUCUUACCAGACCAUCCUUGAACAGCAGAUUUUGUCAAUUGACCGAGAAAUGCUAGAAAAAUUGACUGUAUCCUAUGAUGAAGCAGGCACAACGUGUUUGAUUGCUCUGCUAUCAGAUAAAGACCUCACUGUGGCCAACGUGGGUGACUCGCGCGGGGUCCUGUGUGACAAAGAUGGGAACGCUAUUCCUUUGUCUCAUGAUCACAAGCCUUACCAGUUGAAGGAAAGAAAGAGGAUAAAGAGAGCAGGUGGUUUCAUCAGUUUCAAUGGCUCCUGGAGGGUCCAGGGAAUCCUGGCCAUGUCUCGGUCCCUGGGGGAUUAUCCGCUGAAAAAUCUCAACGUGGUCAUCCCAGACCCAGACAUCCUGACCUUUGACCUGGm6ACAAGCUUCAGCCUGAGUUCAUGAUCUUGGCAUCAGAUGGUCUCUGGGAUGCUUUCAGCAAUGAAGAAGCAGUUCGAUUCAUCAAGGAGCGCUUGGAUGAACCUCACUUUGGGGCCAAGAGCAUAGUUUUACAGUCAUUUUACAGAGGCUGCCCUGACAAUAUAACAGUCAUGGUGGUGAAGUUCAGAAAUAGCAGCAAAACAGAAGAGCAGUGAACCCUUCAGGGGUCUCAGCUGCCUUAGm6ACUAAAGGm6ACUUUCAACACACUGGUCUCUUUUAAUUUAGUGAAAAGUGUGGGAGUUGUAAUUAGGAUCAUCCACCCCAGACAUGGAAUCCCCCCUCCCUGGUGGUCUUAGGUCUAUAAUCAGUGACGAm6ACAGAGGGUGCCCUUGGCCAAUGUAGUUAAGAAACUGGAAAAUGGUUUCUUCAUGUUUUCCCAACUCUUUCAUCCAGUGUCCAAAAUAUAUAAGUAAAUAGCUGUAGAGUCACAUAUAUGAAGUGAAUAGCAUAUGUGUCAUUUAGUCUCCCUGAAGAUUCUUUUCAAGAUCCUGUUCAGGGUCCUCCAGGCAUCAGCUGUUGUGUCCUCUCUUUGUAACAGUGGACAGGACAGACCACCCAGUGCUGCAGGAGACAGGCCACUGCGUCACCUGUGAGUGGUCAGGGGCUGAUGUGGCAACACCCUCUGCCAAGAGm6ACAGAGCUGUCCUGAGAAUGCUUUGUCCUUCUGAGCCCAUGUUUUCUGCUCAGUAGCAGCUUGGAAGCAGAUUUGGAAUGGUUUACUAUUUUGGCUGCUCUUGGGGm6ACUGCGAGAAGCAGAGAGAAUGAGAGACCAGUGGCAACUGCCUGCACAGCAGAGAUAACCCUCUUCCCUUGCUUCCUUUAAUAGUUAAAUAGm6ACUUUGUAUACCACCUGACCAGCCUUUGUG
Sequence (MODOMICS CODE ENCODING)	GGGUAGGAGGGAUGCUGGUGCCAUUAGCAGAGAGGGCUAGACCAGAACAUGCCUGCUUUUUCAACAACUGCAGCUGAAUAUGUAAAAUCUCGACUCCCAGAGGCCCUUAAACAGCAUCUUCAGGACUACGAGAAAGACAAAGAAAAUAGUGUAUUAUCUUACCAGACCAUCCUUGAACAGCAGAUUUUGUCAAUUGACCGAGAAAUGCUAGAAAAAUUGACUGUAUCCUAUGAUGAAGCAGGCACAACGUGUUUGAUUGCUCUGCUAUCAGAUAAAGACCUCACUGUGGCCAACGUGGGUGACUCGCGCGGGGUCCUGUGUGACAAAGAUGGGAACGCUAUUCCUUUGUCUCAUGAUCACAAGCCUUACCAGUUGAAGGAAAGAAAGAGGAUAAAGAGAGCAGGUGGUUUCAUCAGUUUCAAUGGCUCCUGGAGGGUCCAGGGAAUCCUGGCCAUGUCUCGGUCCCUGGGGGAUUAUCCGCUGAAAAAUCUCAACGUGGUCAUCCCAGACCCAGACAUCCUGACCUUUGACCUGG2000000006ACAAGCUUCAGCCUGAGUUCAUGAUCUUGGCAUCAGAUGGUCUCUGGGAUGCUUUCAGCAAUGAAGAAGCAGUUCGAUUCAUCAAGGAGCGCUUGGAUGAACCUCACUUUGGGGCCAAGAGCAUAGUUUUACAGUCAUUUUACAGAGGCUGCCCUGACAAUAUAACAGUCAUGGUGGUGAAGUUCAGAAAUAGCAGCAAAACAGAAGAGCAGUGAACCCUUCAGGGGUCUCAGCUGCCUUAG2000000006ACUAAAGG2000000006ACUUUCAACACACUGGUCUCUUUUAAUUUAGUGAAAAGUGUGGGAGUUGUAAUUAGGAUCAUCCACCCCAGACAUGGAAUCCCCCCUCCCUGGUGGUCUUAGGUCUAUAAUCAGUGACGA2000000006ACAGAGGGUGCCCUUGGCCAAUGUAGUUAAGAAACUGGAAAAUGGUUUCUUCAUGUUUUCCCAACUCUUUCAUCCAGUGUCCAAAAUAUAUAAGUAAAUAGCUGUAGAGUCACAUAUAUGAAGUGAAUAGCAUAUGUGUCAUUUAGUCUCCCUGAAGAUUCUUUUCAAGAUCCUGUUCAGGGUCCUCCAGGCAUCAGCUGUUGUGUCCUCUCUUUGUAACAGUGGACAGGACAGACCACCCAGUGCUGCAGGAGACAGGCCACUGCGUCACCUGUGAGUGGUCAGGGGCUGAUGUGGCAACACCCUCUGCCAAGAG2000000006ACAGAGCUGUCCUGAGAAUGCUUUGUCCUUCUGAGCCCAUGUUUUCUGCUCAGUAGCAGCUUGGAAGCAGAUUUGGAAUGGUUUACUAUUUUGGCUGCUCUUGGGG2000000006ACUGCGAGAAGCAGAGAGAAUGAGAGACCAGUGGCAACUGCCUGCACAGCAGAGAUAACCCUCUUCCCUUGCUUCCUUUAAUAGUUAAAUAG2000000006ACUUUGUAUACCACCUGACCAGCCUUUGUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	536	778	786	906	1222	1328	1420
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	3:161068943:+	3:161069185:+	3:161069193:+	3:161069313:+	3:161069629:+	3:161069735:+	3:161069827:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb Ap2q43bQLNek jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL	4HMi5ykupT9V msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn UKen6WEino9G