General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000302392
Gene ID:	ENSG00000169964
Gene Name:	TMEM42
Sequence (UNICHARACTER ENCODING)	GUCAGCAGGCAACAUGGCCGAGAGGCCGGGGCCPCCGGGCGGCGCCGUGUCCGCGACCGCGUACCCUGACACCCCCGCGGAAUUCCCUCCGCACCUCCAGGCGGGUGCGAUGCGGCGCCGCUUUUGGGGCGUAUUCAACUGUCUGUGCGCCGGCGCGUUCGGGGCCCUGGCCGCCGCCUCCGCCAAGCUGGCCUUCGGCAGCGAGGUGAGCAUGGGUUUAUGCGUCUUAGGCAUUAUUGUGAUGGCGAGCACCAAUUCUCUGAUGUGGACCUUCUPUAGCCGGGGCCUCAGUUUCUCCAUGUCUUCAGCCAUUGCAUCUGUCACAGUGACUUUUUCAAAUAUCCUCAGCUCGGCCUUCCUGGGCUAUGUGCUGUAUGGAGAGUGCCAGGAGGUCUUGUGGUGGGGAGGAGUGUUCCUUAUUCUCUGCGGЖCUCACCCUAAUCCACAGGAAGCUCCCACCCACCUGGAAGCCCCUUCCACACAAGCAGCAGUAGCACCACUUGGCUAGACGGACCAGCUGGAAAGAUCAUGAUGGUGGCCCAGCCUUGGGAUGUCAUGUGGGЖCUGUAUCCUAGGGCGAUCCAGUUGUGCAGCCUUCUGACCAUCAGCCAAGGGAAGCAGGCCUCUGAUGGAGCAGGCUCUGGCUCUGUAAGGAGAGGUGCAGCUGCAGCAGUGUUCUACCGGAAGUGUUUUGAUCAUCUGUACAGUGCUUUGGAUUCUUCCUCCCAGGCCUACCCCAGUGAGCCUUCGCAGAUGCUGGAGAUCCUGGGGUUGGUCUGCUUUGUGUAUGGUACUUGAAACCACGCUGUAAUUAUUGUCCUGUUGCCAAЖCAAAAGCCAGUCAUGUAЖCUCUAGAAGCAGUGACUGGUGGGGCUUUCUGACAGUUCCAUGCUGAUGUAUCAGGCCAUCUGUGUCAUGCUUAUGUAUUAUGGCAAGAAGAGGAAAACUGGAUUAAUAAAUACGUUUUUUGUAAGUUAAAA
Sequence (SHORT NAMES ENCODING)	GUCAGCAGGCAACAUGGCCGAGAGGCCGGGGCCYCCGGGCGGCGCCGUGUCCGCGACCGCGUACCCUGACACCCCCGCGGAAUUCCCUCCGCACCUCCAGGCGGGUGCGAUGCGGCGCCGCUUUUGGGGCGUAUUCAACUGUCUGUGCGCCGGCGCGUUCGGGGCCCUGGCCGCCGCCUCCGCCAAGCUGGCCUUCGGCAGCGAGGUGAGCAUGGGUUUAUGCGUCUUAGGCAUUAUUGUGAUGGCGAGCACCAAUUCUCUGAUGUGGACCUUCUYUAGCCGGGGCCUCAGUUUCUCCAUGUCUUCAGCCAUUGCAUCUGUCACAGUGACUUUUUCAAAUAUCCUCAGCUCGGCCUUCCUGGGCUAUGUGCUGUAUGGAGAGUGCCAGGAGGUCUUGUGGUGGGGAGGAGUGUUCCUUAUUCUCUGCGGm6ACUCACCCUAAUCCACAGGAAGCUCCCACCCACCUGGAAGCCCCUUCCACACAAGCAGCAGUAGCACCACUUGGCUAGACGGACCAGCUGGAAAGAUCAUGAUGGUGGCCCAGCCUUGGGAUGUCAUGUGGGm6ACUGUAUCCUAGGGCGAUCCAGUUGUGCAGCCUUCUGACCAUCAGCCAAGGGAAGCAGGCCUCUGAUGGAGCAGGCUCUGGCUCUGUAAGGAGAGGUGCAGCUGCAGCAGUGUUCUACCGGAAGUGUUUUGAUCAUCUGUACAGUGCUUUGGAUUCUUCCUCCCAGGCCUACCCCAGUGAGCCUUCGCAGAUGCUGGAGAUCCUGGGGUUGGUCUGCUUUGUGUAUGGUACUUGAAACCACGCUGUAAUUAUUGUCCUGUUGCCAAm6ACAAAAGCCAGUCAUGUAm6ACUCUAGAAGCAGUGACUGGUGGGGCUUUCUGACAGUUCCAUGCUGAUGUAUCAGGCCAUCUGUGUCAUGCUUAUGUAUUAUGGCAAGAAGAGGAAAACUGGAUUAAUAAAUACGUUUUUUGUAAGUUAAAA
Sequence (MODOMICS CODE ENCODING)	GUCAGCAGGCAACAUGGCCGAGAGGCCGGGGCC2000000009UCCGGGCGGCGCCGUGUCCGCGACCGCGUACCCUGACACCCCCGCGGAAUUCCCUCCGCACCUCCAGGCGGGUGCGAUGCGGCGCCGCUUUUGGGGCGUAUUCAACUGUCUGUGCGCCGGCGCGUUCGGGGCCCUGGCCGCCGCCUCCGCCAAGCUGGCCUUCGGCAGCGAGGUGAGCAUGGGUUUAUGCGUCUUAGGCAUUAUUGUGAUGGCGAGCACCAAUUCUCUGAUGUGGACCUUCU2000000009UUAGCCGGGGCCUCAGUUUCUCCAUGUCUUCAGCCAUUGCAUCUGUCACAGUGACUUUUUCAAAUAUCCUCAGCUCGGCCUUCCUGGGCUAUGUGCUGUAUGGAGAGUGCCAGGAGGUCUUGUGGUGGGGAGGAGUGUUCCUUAUUCUCUGCGG2000000006ACUCACCCUAAUCCACAGGAAGCUCCCACCCACCUGGAAGCCCCUUCCACACAAGCAGCAGUAGCACCACUUGGCUAGACGGACCAGCUGGAAAGAUCAUGAUGGUGGCCCAGCCUUGGGAUGUCAUGUGGG2000000006ACUGUAUCCUAGGGCGAUCCAGUUGUGCAGCCUUCUGACCAUCAGCCAAGGGAAGCAGGCCUCUGAUGGAGCAGGCUCUGGCUCUGUAAGGAGAGGUGCAGCUGCAGCAGUGUUCUACCGGAAGUGUUUUGAUCAUCUGUACAGUGCUUUGGAUUCUUCCUCCCAGGCCUACCCCAGUGAGCCUUCGCAGAUGCUGGAGAUCCUGGGGUUGGUCUGCUUUGUGUAUGGUACUUGAAACCACGCUGUAAUUAUUGUCCUGUUGCCAA2000000006ACAAAAGCCAGUCAUGUA2000000006ACUCUAGAAGCAGUGACUGGUGGGGCUUUCUGACAGUUCCAUGCUGAUGUAUCAGGCCAUCUGUGUCAUGCUUAUGUAUUAUGGCAAGAAGAGGAAAACUGGAUUAAUAAAUACGUUUUUUGUAAGUUAAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	34	276	430	562	828	846
Modification Positions	Y	Y	m6A	m6A	m6A	m6A
Genomic Coordinates	3:44861945:+	3:44864267:+	3:44865117:+	3:44865249:+	3:44865515:+	3:44865533:+
Level of Experimental Evidence	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8