General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000698408
Gene ID:	ENSG00000072756
Gene Name:	TRNT1
Sequence (UNICHARACTER ENCODING)	GUGCGCGUGGCGGCGGUGGCGGCUGCGGCAACAGCGGGGCCGAUGUGUAGUUGGUGACUGCCUCUCCAGAUGCUGAGGUGCCUGUAUCAUUGGCACAGGCCAGUGCUGAACCGUAGGUGGAGUAGGCUGUGCCUUCCGAAGCAGUAUCUAUUCACAAUGAAGUUGCAGUCUCCCGAAUUCCAGUCACUUUUCACAGAAGGACUGAAGAGUCUGACAGAAUUAUUUGUCAAAGAGAAUCACGAAUUAAGAAUAGCAGGAGGAGCAGUGAGGGAUUUAUUAAAUGGAGUAAAGCCUCAGGAUAUAGAUUUUGCCACCACUGCUACCCCUACUCAAAUGAAGGAGAUGUUUCAGUCGGCUGGGAUUCGGAUGAUAAACAACAGAGGAGAAAAGCACGGAACAAUUACUGCCAGGCUUCAUGAAGAAAAUUUUGAGAUUACUACACUACGGAUUGAUGUCACCACUGAUGGAAGACAUGCUGAGGUAGAAUUUACAACUGACUGGCAGAAAGAUGCGGAACGCAGAGAUCUCACUAUAAAUUCUAUGUUUUUAGGUUUUGAUGGCACUPUAUUUGACUACUPUAAUGGUUAUGAAGAUUUAAAAAAUAAGAAAGUUAGAUUUGUUGGACAUGCUAAACAGAGAAUACAAGAGGAUUAUCUUAGAAUUUUAAGAUACUUCAGGUUUUAUGGGAGAAUUGUAGACAAACCUGGUGACCAUGAUCCUGAGACUUUGGAAGCAAUUGCAGAAAAUGCAAAAGGCUUGGCUGGAAUAUCAGGAGAAAGGAUUUGGGUGGAACUGAAAAAAAUUCUUGUUGGUAACCAUGUAAAUCAUUUGAUUCACCUUAUCUAUGAUCUUGAUGUGGCUCCUUAUAUAGGUUUACCUGCUAAUGCAAGUUUAGAAGAAUUUGACAAAGUCAGUAAAAAUGUUGAUGGUUUUUCACCAAAGCCAGUGЖCUCUUUUGGCCUCAUUAUUCAAAGUACAAGAUGAUGUCACAAAAUUGGAUPUGAGGUUGAAGAUCGCAAAAGAGGAGAAAAACCUUGGCUUAUUUAUAGUUAAAAAUAGGAAAGAUUUAAUUAAAGCAACЖGЖUAGUUCAGACCCAUUGAAACCCUAUCAAGACUUCAUUAUAGAUUCUAGGGAACCUGAUGCAACUACUCGUGUAUGUGAЖCUACUGAAGUACCAAGGAGAGCACUGUCUCCUAAAGGAAAUGCAGCAGUGGUCCAUUCCPCCAUUUCCUGUAAGUGGCCAUGACAUCAGAAAAGUGGGCAUUUCUUCAGGAAAAGAAAUUGGGGCUCUAUUACAACAGUUGCGAGAЖCAGUGGAAAAAAAGUGGUUACCAAAUGGAAAAAGAUGAЖCUUCUGAGUUACAUAAAGAAGACCUAAAACUGAUGGCUACUAAAAAGCAGAGCAUUUCUGCCAGUCAUAACAUCUUUGUACUCUAUGAGCAAAUAGUAAUUUUGGACCUUGAUAAAACAAUUUUGUAGAGUGUAAUAUUUCUAAGAGGAAAUGUCACAGGGGCUAUGAUGCAAGAAAGCCUCAGAAAUGACUGCAUACAGGUAAAAAAAGAAAAAAAAAAGCAACCACCACCAUAAUAUUACCCAGGAAACCAGCUGUGUUCUGUAGAAGGCCGGCCUAUCAGAUUCAAGUUGCAAGCCUUAUACACAGUAAGUGUCUCAUGCACAUAUCCAUGAGGAUUCACAUAAGCUGCCAUCGGCCCACAUAAGGAUAAACUAAAACAAAGAAUCAACAUGGAGAACACGUCAAAACGAGAAGUCUAAUUUUAUUAAAUGCUUAGAAUUUUAUUGAAGUUCACCAAGAAAUGAGGUAUGAGCUAUACAGUUUUUAAUCCUUCAGUUUUAUAUAAUACCAGGAUCUUAGUAUGAAAAUGGGGUGGGGGUACAGCUGGCAGACAGGCCUGUUUUGUCUAAAUGUCUAAAUGUUUUCUGUGAUGACCCAAAGGAAAUAGUACUUGUUUUUAAAACCCUCCUCAAGACAGACAUUGUAAAGAAUAUAAAACUCAAAUGCUUCUAAAGGAGUCUGAGAGUGUAAGUGCAAUGACAAGGUCCUGUGUGGUCAUUUUGGGGCAGUUGAUUAUUUUGCAGAAAGCAGUUUCCUUACCUUCUUGAUUUACAACUGAUGGAUUUGUCAUAAAAUGAUUUUCAAACACUGUUAUAUCAGAGCAUCAGUAUGUGUUCAGAAGCAUGUCCUACUUUGGCCCUAUAUGGCAAAACUGAUGACUGAAAUGUAAUUUCUGAAGCAUCUAUGUUAGGGCCUAAUUGAAGACAGUCUAAUAUAUAGAUUGUCAACAAGAAUUAGGGGGAAAAGAAUUUCUCAGUUGUUUUACUUUACCAUGCUCAUUACCUGUGAAUAAUCCCUGACAUGCAUUGUUGCUCUGAGUACCCAAUCUGGAAGAUGGUCUUAGCAAAAGUGAGCUAAUUCCCUAUAUUUCAUUUGCUAAAUGUUUGUAACUUUAAGGUACUGGAGGAAAGUUUAUGGAAAACAGAAAUACAGUCUUCAUUAUAAUUCUGAUAAGGCAAGUAUAUUAAAAACGUAAUAAAGACCUUACCUGAAUAUUUCA
Sequence (SHORT NAMES ENCODING)	GUGCGCGUGGCGGCGGUGGCGGCUGCGGCAACAGCGGGGCCGAUGUGUAGUUGGUGACUGCCUCUCCAGAUGCUGAGGUGCCUGUAUCAUUGGCACAGGCCAGUGCUGAACCGUAGGUGGAGUAGGCUGUGCCUUCCGAAGCAGUAUCUAUUCACAAUGAAGUUGCAGUCUCCCGAAUUCCAGUCACUUUUCACAGAAGGACUGAAGAGUCUGACAGAAUUAUUUGUCAAAGAGAAUCACGAAUUAAGAAUAGCAGGAGGAGCAGUGAGGGAUUUAUUAAAUGGAGUAAAGCCUCAGGAUAUAGAUUUUGCCACCACUGCUACCCCUACUCAAAUGAAGGAGAUGUUUCAGUCGGCUGGGAUUCGGAUGAUAAACAACAGAGGAGAAAAGCACGGAACAAUUACUGCCAGGCUUCAUGAAGAAAAUUUUGAGAUUACUACACUACGGAUUGAUGUCACCACUGAUGGAAGACAUGCUGAGGUAGAAUUUACAACUGACUGGCAGAAAGAUGCGGAACGCAGAGAUCUCACUAUAAAUUCUAUGUUUUUAGGUUUUGAUGGCACUYUAUUUGACUACUYUAAUGGUUAUGAAGAUUUAAAAAAUAAGAAAGUUAGAUUUGUUGGACAUGCUAAACAGAGAAUACAAGAGGAUUAUCUUAGAAUUUUAAGAUACUUCAGGUUUUAUGGGAGAAUUGUAGACAAACCUGGUGACCAUGAUCCUGAGACUUUGGAAGCAAUUGCAGAAAAUGCAAAAGGCUUGGCUGGAAUAUCAGGAGAAAGGAUUUGGGUGGAACUGAAAAAAAUUCUUGUUGGUAACCAUGUAAAUCAUUUGAUUCACCUUAUCUAUGAUCUUGAUGUGGCUCCUUAUAUAGGUUUACCUGCUAAUGCAAGUUUAGAAGAAUUUGACAAAGUCAGUAAAAAUGUUGAUGGUUUUUCACCAAAGCCAGUGm6ACUCUUUUGGCCUCAUUAUUCAAAGUACAAGAUGAUGUCACAAAAUUGGAUYUGAGGUUGAAGAUCGCAAAAGAGGAGAAAAACCUUGGCUUAUUUAUAGUUAAAAAUAGGAAAGAUUUAAUUAAAGCAACm6AGm6AUAGUUCAGACCCAUUGAAACCCUAUCAAGACUUCAUUAUAGAUUCUAGGGAACCUGAUGCAACUACUCGUGUAUGUGAm6ACUACUGAAGUACCAAGGAGAGCACUGUCUCCUAAAGGAAAUGCAGCAGUGGUCCAUUCCYCCAUUUCCUGUAAGUGGCCAUGACAUCAGAAAAGUGGGCAUUUCUUCAGGAAAAGAAAUUGGGGCUCUAUUACAACAGUUGCGAGAm6ACAGUGGAAAAAAAGUGGUUACCAAAUGGAAAAAGAUGAm6ACUUCUGAGUUACAUAAAGAAGACCUAAAACUGAUGGCUACUAAAAAGCAGAGCAUUUCUGCCAGUCAUAACAUCUUUGUACUCUAUGAGCAAAUAGUAAUUUUGGACCUUGAUAAAACAAUUUUGUAGAGUGUAAUAUUUCUAAGAGGAAAUGUCACAGGGGCUAUGAUGCAAGAAAGCCUCAGAAAUGACUGCAUACAGGUAAAAAAAGAAAAAAAAAAGCAACCACCACCAUAAUAUUACCCAGGAAACCAGCUGUGUUCUGUAGAAGGCCGGCCUAUCAGAUUCAAGUUGCAAGCCUUAUACACAGUAAGUGUCUCAUGCACAUAUCCAUGAGGAUUCACAUAAGCUGCCAUCGGCCCACAUAAGGAUAAACUAAAACAAAGAAUCAACAUGGAGAACACGUCAAAACGAGAAGUCUAAUUUUAUUAAAUGCUUAGAAUUUUAUUGAAGUUCACCAAGAAAUGAGGUAUGAGCUAUACAGUUUUUAAUCCUUCAGUUUUAUAUAAUACCAGGAUCUUAGUAUGAAAAUGGGGUGGGGGUACAGCUGGCAGACAGGCCUGUUUUGUCUAAAUGUCUAAAUGUUUUCUGUGAUGACCCAAAGGAAAUAGUACUUGUUUUUAAAACCCUCCUCAAGACAGACAUUGUAAAGAAUAUAAAACUCAAAUGCUUCUAAAGGAGUCUGAGAGUGUAAGUGCAAUGACAAGGUCCUGUGUGGUCAUUUUGGGGCAGUUGAUUAUUUUGCAGAAAGCAGUUUCCUUACCUUCUUGAUUUACAACUGAUGGAUUUGUCAUAAAAUGAUUUUCAAACACUGUUAUAUCAGAGCAUCAGUAUGUGUUCAGAAGCAUGUCCUACUUUGGCCCUAUAUGGCAAAACUGAUGACUGAAAUGUAAUUUCUGAAGCAUCUAUGUUAGGGCCUAAUUGAAGACAGUCUAAUAUAUAGAUUGUCAACAAGAAUUAGGGGGAAAAGAAUUUCUCAGUUGUUUUACUUUACCAUGCUCAUUACCUGUGAAUAAUCCCUGACAUGCAUUGUUGCUCUGAGUACCCAAUCUGGAAGAUGGUCUUAGCAAAAGUGAGCUAAUUCCCUAUAUUUCAUUUGCUAAAUGUUUGUAACUUUAAGGUACUGGAGGAAAGUUUAUGGAAAACAGAAAUACAGUCUUCAUUAUAAUUCUGAUAAGGCAAGUAUAUUAAAAACGUAAUAAAGACCUUACCUGAAUAUUUCA
Sequence (MODOMICS CODE ENCODING)	GUGCGCGUGGCGGCGGUGGCGGCUGCGGCAACAGCGGGGCCGAUGUGUAGUUGGUGACUGCCUCUCCAGAUGCUGAGGUGCCUGUAUCAUUGGCACAGGCCAGUGCUGAACCGUAGGUGGAGUAGGCUGUGCCUUCCGAAGCAGUAUCUAUUCACAAUGAAGUUGCAGUCUCCCGAAUUCCAGUCACUUUUCACAGAAGGACUGAAGAGUCUGACAGAAUUAUUUGUCAAAGAGAAUCACGAAUUAAGAAUAGCAGGAGGAGCAGUGAGGGAUUUAUUAAAUGGAGUAAAGCCUCAGGAUAUAGAUUUUGCCACCACUGCUACCCCUACUCAAAUGAAGGAGAUGUUUCAGUCGGCUGGGAUUCGGAUGAUAAACAACAGAGGAGAAAAGCACGGAACAAUUACUGCCAGGCUUCAUGAAGAAAAUUUUGAGAUUACUACACUACGGAUUGAUGUCACCACUGAUGGAAGACAUGCUGAGGUAGAAUUUACAACUGACUGGCAGAAAGAUGCGGAACGCAGAGAUCUCACUAUAAAUUCUAUGUUUUUAGGUUUUGAUGGCACU2000000009UUAUUUGACUACU2000000009UUAAUGGUUAUGAAGAUUUAAAAAAUAAGAAAGUUAGAUUUGUUGGACAUGCUAAACAGAGAAUACAAGAGGAUUAUCUUAGAAUUUUAAGAUACUUCAGGUUUUAUGGGAGAAUUGUAGACAAACCUGGUGACCAUGAUCCUGAGACUUUGGAAGCAAUUGCAGAAAAUGCAAAAGGCUUGGCUGGAAUAUCAGGAGAAAGGAUUUGGGUGGAACUGAAAAAAAUUCUUGUUGGUAACCAUGUAAAUCAUUUGAUUCACCUUAUCUAUGAUCUUGAUGUGGCUCCUUAUAUAGGUUUACCUGCUAAUGCAAGUUUAGAAGAAUUUGACAAAGUCAGUAAAAAUGUUGAUGGUUUUUCACCAAAGCCAGUG2000000006ACUCUUUUGGCCUCAUUAUUCAAAGUACAAGAUGAUGUCACAAAAUUGGAU2000000009UUGAGGUUGAAGAUCGCAAAAGAGGAGAAAAACCUUGGCUUAUUUAUAGUUAAAAAUAGGAAAGAUUUAAUUAAAGCAAC2000000006AG2000000006AUAGUUCAGACCCAUUGAAACCCUAUCAAGACUUCAUUAUAGAUUCUAGGGAACCUGAUGCAACUACUCGUGUAUGUGA2000000006ACUACUGAAGUACCAAGGAGAGCACUGUCUCCUAAAGGAAAUGCAGCAGUGGUCCAUUCC2000000009UCCAUUUCCUGUAAGUGGCCAUGACAUCAGAAAAGUGGGCAUUUCUUCAGGAAAAGAAAUUGGGGCUCUAUUACAACAGUUGCGAGA2000000006ACAGUGGAAAAAAAGUGGUUACCAAAUGGAAAAAGAUGA2000000006ACUUCUGAGUUACAUAAAGAAGACCUAAAACUGAUGGCUACUAAAAAGCAGAGCAUUUCUGCCAGUCAUAACAUCUUUGUACUCUAUGAGCAAAUAGUAAUUUUGGACCUUGAUAAAACAAUUUUGUAGAGUGUAAUAUUUCUAAGAGGAAAUGUCACAGGGGCUAUGAUGCAAGAAAGCCUCAGAAAUGACUGCAUACAGGUAAAAAAAGAAAAAAAAAAGCAACCACCACCAUAAUAUUACCCAGGAAACCAGCUGUGUUCUGUAGAAGGCCGGCCUAUCAGAUUCAAGUUGCAAGCCUUAUACACAGUAAGUGUCUCAUGCACAUAUCCAUGAGGAUUCACAUAAGCUGCCAUCGGCCCACAUAAGGAUAAACUAAAACAAAGAAUCAACAUGGAGAACACGUCAAAACGAGAAGUCUAAUUUUAUUAAAUGCUUAGAAUUUUAUUGAAGUUCACCAAGAAAUGAGGUAUGAGCUAUACAGUUUUUAAUCCUUCAGUUUUAUAUAAUACCAGGAUCUUAGUAUGAAAAUGGGGUGGGGGUACAGCUGGCAGACAGGCCUGUUUUGUCUAAAUGUCUAAAUGUUUUCUGUGAUGACCCAAAGGAAAUAGUACUUGUUUUUAAAACCCUCCUCAAGACAGACAUUGUAAAGAAUAUAAAACUCAAAUGCUUCUAAAGGAGUCUGAGAGUGUAAGUGCAAUGACAAGGUCCUGUGUGGUCAUUUUGGGGCAGUUGAUUAUUUUGCAGAAAGCAGUUUCCUUACCUUCUUGAUUUACAACUGAUGGAUUUGUCAUAAAAUGAUUUUCAAACACUGUUAUAUCAGAGCAUCAGUAUGUGUUCAGAAGCAUGUCCUACUUUGGCCCUAUAUGGCAAAACUGAUGACUGAAAUGUAAUUUCUGAAGCAUCUAUGUUAGGGCCUAAUUGAAGACAGUCUAAUAUAUAGAUUGUCAACAAGAAUUAGGGGGAAAAGAAUUUCUCAGUUGUUUUACUUUACCAUGCUCAUUACCUGUGAAUAAUCCCUGACAUGCAUUGUUGCUCUGAGUACCCAAUCUGGAAGAUGGUCUUAGCAAAAGUGAGCUAAUUCCCUAUAUUUCAUUUGCUAAAUGUUUGUAACUUUAAGGUACUGGAGGAAAGUUUAUGGAAAACAGAAAUACAGUCUUCAUUAUAAUUCUGAUAAGGCAAGUAUAUUAAAAACGUAAUAAAGACCUUACCUGAAUAUUUCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	565	578	949	1000	1080	1082	1161	1221	1308	1347
Modification Positions	Y	Y	m6A	Y	m6A	m6A	m6A	Y	m6A	m6A
Genomic Coordinates	3:3144598:+	3:3144611:+	3:3147527:+	3:3147578:+	3:3147658:+	3:3147660:+	3:3147941:+	3:3148001:+	3:3148088:+	3:3148127:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr	6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU KRfQJWH4K5KH Mg9GixDBFQAT V5PvfiKsgFMd	3TeAZFYFxgvp 6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU KRfQJWH4K5KH Mg9GixDBFQAT V5PvfiKsgFMd	msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 LZJKems7W2wi BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	3TeAZFYFxgvp msuJfBpJvM5H NjZ8bGGJsNSR VyCX26p5UBRL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr