General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000482071
Gene ID:	ENSG00000158092
Gene Name:	NCK1
Sequence (UNICHARACTER ENCODING)	UGAAUUAUCAUUGAUAAAGGGGЖCAAAGGUGAUCGUCAUGGAGAAAUGCAGUGAUGGGUGGUGGCGUGGUAGCUACAAUGGЖCAAGUUGGAUGGUUCCCUUCAAACUAUGUAЖCUGAAGAAGGUGACAGUCCUUUGGGUGACCAUGUGGGUUCUCUGUCAGAGAAAUUAGCAGCAGUCGUCAAUAACCUAAAUACUGGGCAAGUGUUGCAUGUGGUACAGGCUCUPUACCCAUUCAGCUCAUCUAAUGAUGAAGAЖCUUAAUUUCGAGAAAGGAGAUGUAAUGGAUGUUAUUGAAAAACCUGAAAAUGACCCAGAGUGGUGGAAAUGCAGGAAGAUCAAUGGUAUGGUUGGUCUAGUACCAAAAAЖCUAUGUUACCGUUAUGCAGAAUAAUCCAUUAЖCUUCAGGUUUGGAACCAUCACCPCCACAGUGUGAUUACAUUAGGCCUUCACUCACUGGAAAGUUUGCUGGCAAUCCUUGGUAUUAUGGCAAAGUCACCAGGCAUCAAGCAGAAAUGGCAUUAAAUGAAAGAGGACAUGAAGGGGAUUUCCUCAUUCGUGAUAGUGAAUCUUCGAUACUGCUUAGGAUAUUAGAAUUUGAUGACACUCAUUUUCCUUAAAAAUGGCCUUUCUUUUUCCUUGAUGAAAGAUAUCACUACUUUUCCAUUUAUUAAAUCAUGGUUAAUCUUGGCUU
Sequence (SHORT NAMES ENCODING)	UGAAUUAUCAUUGAUAAAGGGGm6ACAAAGGUGAUCGUCAUGGAGAAAUGCAGUGAUGGGUGGUGGCGUGGUAGCUACAAUGGm6ACAAGUUGGAUGGUUCCCUUCAAACUAUGUAm6ACUGAAGAAGGUGACAGUCCUUUGGGUGACCAUGUGGGUUCUCUGUCAGAGAAAUUAGCAGCAGUCGUCAAUAACCUAAAUACUGGGCAAGUGUUGCAUGUGGUACAGGCUCUYUACCCAUUCAGCUCAUCUAAUGAUGAAGAm6ACUUAAUUUCGAGAAAGGAGAUGUAAUGGAUGUUAUUGAAAAACCUGAAAAUGACCCAGAGUGGUGGAAAUGCAGGAAGAUCAAUGGUAUGGUUGGUCUAGUACCAAAAAm6ACUAUGUUACCGUUAUGCAGAAUAAUCCAUUAm6ACUUCAGGUUUGGAACCAUCACCYCCACAGUGUGAUUACAUUAGGCCUUCACUCACUGGAAAGUUUGCUGGCAAUCCUUGGUAUUAUGGCAAAGUCACCAGGCAUCAAGCAGAAAUGGCAUUAAAUGAAAGAGGACAUGAAGGGGAUUUCCUCAUUCGUGAUAGUGAAUCUUCGAUACUGCUUAGGAUAUUAGAAUUUGAUGACACUCAUUUUCCUUAAAAAUGGCCUUUCUUUUUCCUUGAUGAAAGAUAUCACUACUUUUCCAUUUAUUAAAUCAUGGUUAAUCUUGGCUU
Sequence (MODOMICS CODE ENCODING)	UGAAUUAUCAUUGAUAAAGGGG2000000006ACAAAGGUGAUCGUCAUGGAGAAAUGCAGUGAUGGGUGGUGGCGUGGUAGCUACAAUGG2000000006ACAAGUUGGAUGGUUCCCUUCAAACUAUGUA2000000006ACUGAAGAAGGUGACAGUCCUUUGGGUGACCAUGUGGGUUCUCUGUCAGAGAAAUUAGCAGCAGUCGUCAAUAACCUAAAUACUGGGCAAGUGUUGCAUGUGGUACAGGCUCU2000000009UUACCCAUUCAGCUCAUCUAAUGAUGAAGA2000000006ACUUAAUUUCGAGAAAGGAGAUGUAAUGGAUGUUAUUGAAAAACCUGAAAAUGACCCAGAGUGGUGGAAAUGCAGGAAGAUCAAUGGUAUGGUUGGUCUAGUACCAAAAA2000000006ACUAUGUUACCGUUAUGCAGAAUAAUCCAUUA2000000006ACUUCAGGUUUGGAACCAUCACC2000000009UCCACAGUGUGAUUACAUUAGGCCUUCACUCACUGGAAAGUUUGCUGGCAAUCCUUGGUAUUAUGGCAAAGUCACCAGGCAUCAAGCAGAAAUGGCAUUAAAUGAAAGAGGACAUGAAGGGGAUUUCCUCAUUCGUGAUAGUGAAUCUUCGAUACUGCUUAGGAUAUUAGAAUUUGAUGACACUCAUUUUCCUUAAAAAUGGCCUUUCUUUUUCCUUGAUGAAAGAUAUCACUACUUUUCCAUUUAUUAAAUCAUGGUUAAUCUUGGCUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	23	82	113	226	256	366	398	421
Modification Positions	m6A	m6A	m6A	Y	m6A	m6A	m6A	Y
Genomic Coordinates	3:136945747:+	3:136945806:+	3:136945837:+	3:136945950:+	3:136945980:+	3:136946090:+	3:136946122:+	3:136946145:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	4HMi5ykupT9V 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	4HMi5ykupT9V 5FhTyQVy2tKW 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	6UuHp6YApVKv msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8