General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000425046
Gene ID:	ENSG00000170364
Gene Name:	SETMAR
Sequence (UNICHARACTER ENCODING)	UGUCAGGGUAGUGGGCGUUGCGUGAGGCGGGUAAAUGUUCGCGGAAGCGGCAAAGACGACACGGCCUUGUGGGAUGGCGGAGUUUAAGGAGAAGCCUGAGGCCCCGACUGAGCAGCUGGAUGUCGCGUGCGGCCAGGAAAACUUGCCGGUGGGCGCGUGGCCCCCGGGGGCCGCGCCGGCGCCCUUCCAGUUCUCUGUACUGCCCCGUAGAAAAGUCGAACAUCAGUUGUGGAAAUGAGAAGGAACCCAGCAUGUGUGGCUCAGCCCCUUCUGUGUUCCCCUCCUGCAAGCGAUUGACCCUUGAGACUAUGAAAAUGAUGUUAGACAAAAAGCAAAUUCGAGCAAUUUUCUUAUUCGAGUUCAAAAUGGGUCGUAAAGCAGCAGAAACAACUCGCAACAUCAACAAUGCAUUUGGCCCAGGAЖCUGCUAACGAACGUACAGUGCAGUGGUGGUUCAAGAAGUUUUGCAAAGGAGAUGAGAGCCUUGAAGAUGAGGAGCGUAGUGGCCGGCCAUCAGAAGUUGACAACGACCAGUUGAGAGCAAUCAUCGAAGCUGAUCCCCUUACAACUACACGAGAAGUUGCUGAAGAACUCAAUGUCAACCAUUCUACGGUCGUUCGACAUUUGAAGCAAAUUGGAAAGGUGAAAAAGCUCGAUAAGUGGGUGCCUCAUGAGCUGЖCUGAAAAUCAAAAAAAUCGUCGUUUUGAAGUGUCAUCUUCUCUUAUUCUACGCAACCACAACGAЖCCAUUUCUCGAUCGGAUUGUGACGUGUGAUGAAAAGUGGAUUUUAUAUGACAACCGGCGACGAUCAGCUCAGUGGUUGGAUCAAGAAGAAGCUCCAAAGCACUUCCCAAAGCCAAUCUUGCACCCAAAAAAGGUCAUGGUCACUAUUUGGUGGUCUGCUGCUGGUCUGAUCCACUACAGCUUUCUGAAUCCCGGUGAAACCAUUACAUCUGAGAAGUAUGCUCAGGAAAUCGAUGAGAUGAЖCCAAAAЖCUGCAACGCCUGCAGCUGGCAUUGGUCAACAGAAAGGGCCCAAUUCUUCUCCACGACAAUGCCCGACCGCAUGUUGCACAACCCACACUUCAAAAGUUGAAUGAAUUGGGCUAUGAAGUUUUGCCUCAPCCACCGUAUUCACCUGACCUCUUGCCAACCAACUACCACGUCUPUAAGCAUCUCAACAЖCUUUUUGCAGGGAAAACGCUUCCACAACCAGCAGGAUGCAGAAAAUGCUUUCCAAGAGUUCGUCGAAUCCCAAAGCACGGAUUUUUACGCUACAGGAAUAAACCAACUUAUUUCUCGUUGGCAAAAAUGUGUUGAUUGUAAUGGUUCCUAUUUUGAUUAAUAAAAAUGCGUUGAGCCUA
Sequence (SHORT NAMES ENCODING)	UGUCAGGGUAGUGGGCGUUGCGUGAGGCGGGUAAAUGUUCGCGGAAGCGGCAAAGACGACACGGCCUUGUGGGAUGGCGGAGUUUAAGGAGAAGCCUGAGGCCCCGACUGAGCAGCUGGAUGUCGCGUGCGGCCAGGAAAACUUGCCGGUGGGCGCGUGGCCCCCGGGGGCCGCGCCGGCGCCCUUCCAGUUCUCUGUACUGCCCCGUAGAAAAGUCGAACAUCAGUUGUGGAAAUGAGAAGGAACCCAGCAUGUGUGGCUCAGCCCCUUCUGUGUUCCCCUCCUGCAAGCGAUUGACCCUUGAGACUAUGAAAAUGAUGUUAGACAAAAAGCAAAUUCGAGCAAUUUUCUUAUUCGAGUUCAAAAUGGGUCGUAAAGCAGCAGAAACAACUCGCAACAUCAACAAUGCAUUUGGCCCAGGAm6ACUGCUAACGAACGUACAGUGCAGUGGUGGUUCAAGAAGUUUUGCAAAGGAGAUGAGAGCCUUGAAGAUGAGGAGCGUAGUGGCCGGCCAUCAGAAGUUGACAACGACCAGUUGAGAGCAAUCAUCGAAGCUGAUCCCCUUACAACUACACGAGAAGUUGCUGAAGAACUCAAUGUCAACCAUUCUACGGUCGUUCGACAUUUGAAGCAAAUUGGAAAGGUGAAAAAGCUCGAUAAGUGGGUGCCUCAUGAGCUGm6ACUGAAAAUCAAAAAAAUCGUCGUUUUGAAGUGUCAUCUUCUCUUAUUCUACGCAACCACAACGAm6ACCAUUUCUCGAUCGGAUUGUGACGUGUGAUGAAAAGUGGAUUUUAUAUGACAACCGGCGACGAUCAGCUCAGUGGUUGGAUCAAGAAGAAGCUCCAAAGCACUUCCCAAAGCCAAUCUUGCACCCAAAAAAGGUCAUGGUCACUAUUUGGUGGUCUGCUGCUGGUCUGAUCCACUACAGCUUUCUGAAUCCCGGUGAAACCAUUACAUCUGAGAAGUAUGCUCAGGAAAUCGAUGAGAUGAm6ACCAAAAm6ACUGCAACGCCUGCAGCUGGCAUUGGUCAACAGAAAGGGCCCAAUUCUUCUCCACGACAAUGCCCGACCGCAUGUUGCACAACCCACACUUCAAAAGUUGAAUGAAUUGGGCUAUGAAGUUUUGCCUCAYCCACCGUAUUCACCUGACCUCUUGCCAACCAACUACCACGUCUYUAAGCAUCUCAACAm6ACUUUUUGCAGGGAAAACGCUUCCACAACCAGCAGGAUGCAGAAAAUGCUUUCCAAGAGUUCGUCGAAUCCCAAAGCACGGAUUUUUACGCUACAGGAAUAAACCAACUUAUUUCUCGUUGGCAAAAAUGUGUUGAUUGUAAUGGUUCCUAUUUUGAUUAAUAAAAAUGCGUUGAGCCUA
Sequence (MODOMICS CODE ENCODING)	UGUCAGGGUAGUGGGCGUUGCGUGAGGCGGGUAAAUGUUCGCGGAAGCGGCAAAGACGACACGGCCUUGUGGGAUGGCGGAGUUUAAGGAGAAGCCUGAGGCCCCGACUGAGCAGCUGGAUGUCGCGUGCGGCCAGGAAAACUUGCCGGUGGGCGCGUGGCCCCCGGGGGCCGCGCCGGCGCCCUUCCAGUUCUCUGUACUGCCCCGUAGAAAAGUCGAACAUCAGUUGUGGAAAUGAGAAGGAACCCAGCAUGUGUGGCUCAGCCCCUUCUGUGUUCCCCUCCUGCAAGCGAUUGACCCUUGAGACUAUGAAAAUGAUGUUAGACAAAAAGCAAAUUCGAGCAAUUUUCUUAUUCGAGUUCAAAAUGGGUCGUAAAGCAGCAGAAACAACUCGCAACAUCAACAAUGCAUUUGGCCCAGGA2000000006ACUGCUAACGAACGUACAGUGCAGUGGUGGUUCAAGAAGUUUUGCAAAGGAGAUGAGAGCCUUGAAGAUGAGGAGCGUAGUGGCCGGCCAUCAGAAGUUGACAACGACCAGUUGAGAGCAAUCAUCGAAGCUGAUCCCCUUACAACUACACGAGAAGUUGCUGAAGAACUCAAUGUCAACCAUUCUACGGUCGUUCGACAUUUGAAGCAAAUUGGAAAGGUGAAAAAGCUCGAUAAGUGGGUGCCUCAUGAGCUG2000000006ACUGAAAAUCAAAAAAAUCGUCGUUUUGAAGUGUCAUCUUCUCUUAUUCUACGCAACCACAACGA2000000006ACCAUUUCUCGAUCGGAUUGUGACGUGUGAUGAAAAGUGGAUUUUAUAUGACAACCGGCGACGAUCAGCUCAGUGGUUGGAUCAAGAAGAAGCUCCAAAGCACUUCCCAAAGCCAAUCUUGCACCCAAAAAAGGUCAUGGUCACUAUUUGGUGGUCUGCUGCUGGUCUGAUCCACUACAGCUUUCUGAAUCCCGGUGAAACCAUUACAUCUGAGAAGUAUGCUCAGGAAAUCGAUGAGAUGA2000000006ACCAAAA2000000006ACUGCAACGCCUGCAGCUGGCAUUGGUCAACAGAAAGGGCCCAAUUCUUCUCCACGACAAUGCCCGACCGCAUGUUGCACAACCCACACUUCAAAAGUUGAAUGAAUUGGGCUAUGAAGUUUUGCCUCA2000000009UCCACCGUAUUCACCUGACCUCUUGCCAACCAACUACCACGUCU2000000009UUAAGCAUCUCAACA2000000006ACUUUUUGCAGGGAAAACGCUUCCACAACCAGCAGGAUGCAGAAAAUGCUUUCCAAGAGUUCGUCGAAUCCCAAAGCACGGAUUUUUACGCUACAGGAAUAAACCAACUUAUUUCUCGUUGGCAAAAAUGUGUUGAUUGUAAUGGUUCCUAUUUUGAUUAAUAAAAAUGCGUUGAGCCUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	423	678	743	985	992	1121	1165	1180
Modification Positions	m6A	m6A	m6A	m6A	m6A	Y	Y	m6A
Genomic Coordinates	3:4316329:+	3:4316584:+	3:4316649:+	3:4316891:+	3:4316898:+	3:4317027:+	3:4317071:+	3:4317086:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL 93arJtwJmuS9 Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	3TeAZFYFxgvp msuJfBpJvM5H NjZ8bGGJsNSR UN3tNpbCPHYf VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 Yfn77uLS5tv8	3TeAZFYFxgvp Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 Yfn77uLS5tv8	msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu VyCX26p5UBRL Lny8GcCeVGc9