General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000424697
Gene ID:	ENSG00000166526
Gene Name:	ZNF3
Sequence (UNICHARACTER ENCODING)	AACCGACCCGGAAGCGAAACGAGGGGGAACUUCCGUUCUUUGUUCUGUCCCCGGUGUGUGGGUCUGUGACAGGGUCCAACAGGGCCUGGUCCGUGUCCGGUCCCCCAAAUCUGUCGUCCCUGCCCCCAGGUGCUUCCUCAUUCUCUUUUAAAACCCGCUUCCCGCUGAGUCUGCACCCAGGAGACCAGAGAGCACCUUGCCCUUCCAUGGAAACUCAGGCUGAUCUCGUAUCUCAGGAACCUCAGGCCCUGCUUGACAGUGCUCUUCCUUCAAAAGUUCCUGCCUUUUCCGACAAGGACAGCCUGGGGGAUGAGAUGUUGGCGGCUGCGCUCCUAAAGGCCAAGUCCCAGGAGCUGGUAACCUUUGAGGAUGUAGCUGUGUACUUCAUCCGGAAGGAGUGGAAGCGUUUGGAACCUGCUCAGAGGGACCUCUAUAGAGAUGUGAUGCUGGAGAAUUACGGGAAUGUGUUCUCACUGGAUCGUGAGACCAGGACUGAAAAUGAUCAAGAAAUUUCUGAAGACACAAGAUCACAUGGGGUCCUACUGGGAAGAUUUCAAAAGGAUAUUUCUCAGGGUCUCAAGUUUAAAGAAGCCUAUGAACGAGAAGUCAGUCUGAAAAGGCCGCUGGGGAACUCCCCUGGAGAAAGЖCUGAACAGGAAAAUGCCAGAUUUUGGUCAAGUGACAGUUGAGGAGAAGCUAACCCCCAGGGGAGAGAGAAGCGAGAAAUAUAAUGAUUUUGGGAACAGCUUCACUGUGAAUUCCAACCUUAUCUCACAUCAGAGЖCUCCCCGUGGGAGACAGACCCCAUAAGUGUGAUGAAUGUAGCAAGAGCUUUAAUCGAЖCUUCAGACCUUAUUCAACAUCAGAGAAUCCACACUGGGGAAAAGCCCUAUGAAUGUAAUGAGUGUGGGAAGGCCUUCAGCCAGAGCUCACACCUUAUUCAGCAUCAGAGAAUCCACACUGGGGAAAAACCUUAUGAAUGUAGUGAUUGUGGGAAAACCUUCAGCUGUAGCUCUGCCCUCAUUCUGCAUCGGAGGAUCCACACGGGGGAGAAACCCUAUGAAUGUAAUGAGUGUGGGAAGACCUUCAGCUGGAGCUCCACCCUCACCCACCAUCAGAGAAUCCACACUGGUGAGAAACCCUACGCCUGCAAUGAAUGUGGGAAGGCCUUCAGCAGGAGCUCAACCCUUAUUCACCAUCAGAGAAUCCACACUGGAGAAAAACCCUAUGAAUGUAAUGAAUGUGGGAAAGCCUUCAGCCAGAGCUCACACCUCUAUCAGCACCAGAGAAUCCACACUGGAGAGAAGCCCUACGAAUGUAUGGAAUGUGGAGGAAAGUUUACCUACAGUUCAGGCCUUAUUCAGCAUCAAAGAAUCCACACCGGGGAGAACCCCUAUGAAUGUAGUGAGUGUGGGAAAGCCUUCAGGUACAGCUCGGCUCUUGUUCGCCAUCAGAGAAUUCACACUGGAGAGAAGCCUUUGAAUGGGAUCGGCAUGAGCAAAAGCUCCCUCAGAGUUACGACCGAGUUAAAUAUCAGAGAGUCCACGUGAAAGAGCCACACACCCAUUUUCCUCACUUUCCCUGAGUCUCAAGAGCUCUUGCCUUACCCUAUAAAUCUCAACAGCUUAGGAUGUGUCCCUUUCAACUCAGЖCUUUUCAUUUUAGAGAAUGGGGCAGAUGGGGCAAAUCGUUGAAUUUUCCCAGAAAUCACACCAGCCUUAGAAAGCGUCAAGGCAAGUGGAUGGCGUGCUGGGAAUAGAAAGCAGCUCUGGGACCAGUUACCCCAUUUAGGAAAGGAGUUUGCACUAAЖCUGUUUUUCUCACAGCAGAGGAACCUUUCCAAGGUGGGGAUGGAAGCACAGUCGGGACAGAAUUCGAUGGAUUCCUPUAGUUGGAGUCCGCGUAGUCAGCACAGACAGCAGUGGAAAGGACGCUCUGGGUCCUGUUAUUUGCUAGGGAGGGUAAAGGGAGACUAUUUCAAAGCUACUGUUCCUAGUCCAGCUPUAAGUUUCGGUAAGAAACAUGCUGUUUUGUUUCAUGAUUUCGUUAAUUAUGGAAAUUUGGCAUUGAGGGAUUAUUUUAUUGAGGGUAGAAGAGAUUCCAGAAUCAUCAUCUGUGAUGAUGGUGUCCUPUAGGGCUCUUGGAGCAGCCAGACCAUGUUUCCAAGAGAAACCUGGUGAUAUUGCCAGCAGACCCCCUGCCAUCCCCCCCAGUUGUCCUGGGGCUGAAUGGGCAAAUCUGUCCAAACAGCUAGUAACCGGCUGUGAGGGAGAGGGUCAGAAGCACUUAGCGUUGGCCUCUGAUUGCUGUCCUCUCUUGUCCUCUUCCCACUCCAAUGAUGAAAAUGAUUUUCUCUAAAUGCCUGGGUAAGGAUGCUUUCAAGGAGCUCACUUGGCCUGCUUGCCCUGCCCUCUCACCUCUGACACCCAGCCCCAGGAGCCAGACCACUCCUGCCUCCACCUCUGACUCUUCAGCAGCUGAAGAUUAAUGCAGAGAAAGAGCAAAGCCCAAAAGGGAGAAAAAAAAAACAAAAAAACAAAAAAACGAAGCCCAGAGAAGGCAGGCUGUGCCUGAGCCUGGUAGCAGAGCUCGUUGCUGGGUGAGGAUGGCACUCCCCGAGUUUUCCCAACCGACGGGAUGACCUUCCAUUGUGUUUUCCCAACCCUGCUCAPCCUGUAGCAUAAAUGAAGUGCACUAUUAAACAGAAUAGUUUUUCAGAAGAG
Sequence (SHORT NAMES ENCODING)	AACCGACCCGGAAGCGAAACGAGGGGGAACUUCCGUUCUUUGUUCUGUCCCCGGUGUGUGGGUCUGUGACAGGGUCCAACAGGGCCUGGUCCGUGUCCGGUCCCCCAAAUCUGUCGUCCCUGCCCCCAGGUGCUUCCUCAUUCUCUUUUAAAACCCGCUUCCCGCUGAGUCUGCACCCAGGAGACCAGAGAGCACCUUGCCCUUCCAUGGAAACUCAGGCUGAUCUCGUAUCUCAGGAACCUCAGGCCCUGCUUGACAGUGCUCUUCCUUCAAAAGUUCCUGCCUUUUCCGACAAGGACAGCCUGGGGGAUGAGAUGUUGGCGGCUGCGCUCCUAAAGGCCAAGUCCCAGGAGCUGGUAACCUUUGAGGAUGUAGCUGUGUACUUCAUCCGGAAGGAGUGGAAGCGUUUGGAACCUGCUCAGAGGGACCUCUAUAGAGAUGUGAUGCUGGAGAAUUACGGGAAUGUGUUCUCACUGGAUCGUGAGACCAGGACUGAAAAUGAUCAAGAAAUUUCUGAAGACACAAGAUCACAUGGGGUCCUACUGGGAAGAUUUCAAAAGGAUAUUUCUCAGGGUCUCAAGUUUAAAGAAGCCUAUGAACGAGAAGUCAGUCUGAAAAGGCCGCUGGGGAACUCCCCUGGAGAAAGm6ACUGAACAGGAAAAUGCCAGAUUUUGGUCAAGUGACAGUUGAGGAGAAGCUAACCCCCAGGGGAGAGAGAAGCGAGAAAUAUAAUGAUUUUGGGAACAGCUUCACUGUGAAUUCCAACCUUAUCUCACAUCAGAGm6ACUCCCCGUGGGAGACAGACCCCAUAAGUGUGAUGAAUGUAGCAAGAGCUUUAAUCGAm6ACUUCAGACCUUAUUCAACAUCAGAGAAUCCACACUGGGGAAAAGCCCUAUGAAUGUAAUGAGUGUGGGAAGGCCUUCAGCCAGAGCUCACACCUUAUUCAGCAUCAGAGAAUCCACACUGGGGAAAAACCUUAUGAAUGUAGUGAUUGUGGGAAAACCUUCAGCUGUAGCUCUGCCCUCAUUCUGCAUCGGAGGAUCCACACGGGGGAGAAACCCUAUGAAUGUAAUGAGUGUGGGAAGACCUUCAGCUGGAGCUCCACCCUCACCCACCAUCAGAGAAUCCACACUGGUGAGAAACCCUACGCCUGCAAUGAAUGUGGGAAGGCCUUCAGCAGGAGCUCAACCCUUAUUCACCAUCAGAGAAUCCACACUGGAGAAAAACCCUAUGAAUGUAAUGAAUGUGGGAAAGCCUUCAGCCAGAGCUCACACCUCUAUCAGCACCAGAGAAUCCACACUGGAGAGAAGCCCUACGAAUGUAUGGAAUGUGGAGGAAAGUUUACCUACAGUUCAGGCCUUAUUCAGCAUCAAAGAAUCCACACCGGGGAGAACCCCUAUGAAUGUAGUGAGUGUGGGAAAGCCUUCAGGUACAGCUCGGCUCUUGUUCGCCAUCAGAGAAUUCACACUGGAGAGAAGCCUUUGAAUGGGAUCGGCAUGAGCAAAAGCUCCCUCAGAGUUACGACCGAGUUAAAUAUCAGAGAGUCCACGUGAAAGAGCCACACACCCAUUUUCCUCACUUUCCCUGAGUCUCAAGAGCUCUUGCCUUACCCUAUAAAUCUCAACAGCUUAGGAUGUGUCCCUUUCAACUCAGm6ACUUUUCAUUUUAGAGAAUGGGGCAGAUGGGGCAAAUCGUUGAAUUUUCCCAGAAAUCACACCAGCCUUAGAAAGCGUCAAGGCAAGUGGAUGGCGUGCUGGGAAUAGAAAGCAGCUCUGGGACCAGUUACCCCAUUUAGGAAAGGAGUUUGCACUAAm6ACUGUUUUUCUCACAGCAGAGGAACCUUUCCAAGGUGGGGAUGGAAGCACAGUCGGGACAGAAUUCGAUGGAUUCCUYUAGUUGGAGUCCGCGUAGUCAGCACAGACAGCAGUGGAAAGGACGCUCUGGGUCCUGUUAUUUGCUAGGGAGGGUAAAGGGAGACUAUUUCAAAGCUACUGUUCCUAGUCCAGCUYUAAGUUUCGGUAAGAAACAUGCUGUUUUGUUUCAUGAUUUCGUUAAUUAUGGAAAUUUGGCAUUGAGGGAUUAUUUUAUUGAGGGUAGAAGAGAUUCCAGAAUCAUCAUCUGUGAUGAUGGUGUCCUYUAGGGCUCUUGGAGCAGCCAGACCAUGUUUCCAAGAGAAACCUGGUGAUAUUGCCAGCAGACCCCCUGCCAUCCCCCCCAGUUGUCCUGGGGCUGAAUGGGCAAAUCUGUCCAAACAGCUAGUAACCGGCUGUGAGGGAGAGGGUCAGAAGCACUUAGCGUUGGCCUCUGAUUGCUGUCCUCUCUUGUCCUCUUCCCACUCCAAUGAUGAAAAUGAUUUUCUCUAAAUGCCUGGGUAAGGAUGCUUUCAAGGAGCUCACUUGGCCUGCUUGCCCUGCCCUCUCACCUCUGACACCCAGCCCCAGGAGCCAGACCACUCCUGCCUCCACCUCUGACUCUUCAGCAGCUGAAGAUUAAUGCAGAGAAAGAGCAAAGCCCAAAAGGGAGAAAAAAAAAACAAAAAAACAAAAAAACGAAGCCCAGAGAAGGCAGGCUGUGCCUGAGCCUGGUAGCAGAGCUCGUUGCUGGGUGAGGAUGGCACUCCCCGAGUUUUCCCAACCGACGGGAUGACCUUCCAUUGUGUUUUCCCAACCCUGCUCAYCCUGUAGCAUAAAUGAAGUGCACUAUUAAACAGAAUAGUUUUUCAGAAGAG
Sequence (MODOMICS CODE ENCODING)	AACCGACCCGGAAGCGAAACGAGGGGGAACUUCCGUUCUUUGUUCUGUCCCCGGUGUGUGGGUCUGUGACAGGGUCCAACAGGGCCUGGUCCGUGUCCGGUCCCCCAAAUCUGUCGUCCCUGCCCCCAGGUGCUUCCUCAUUCUCUUUUAAAACCCGCUUCCCGCUGAGUCUGCACCCAGGAGACCAGAGAGCACCUUGCCCUUCCAUGGAAACUCAGGCUGAUCUCGUAUCUCAGGAACCUCAGGCCCUGCUUGACAGUGCUCUUCCUUCAAAAGUUCCUGCCUUUUCCGACAAGGACAGCCUGGGGGAUGAGAUGUUGGCGGCUGCGCUCCUAAAGGCCAAGUCCCAGGAGCUGGUAACCUUUGAGGAUGUAGCUGUGUACUUCAUCCGGAAGGAGUGGAAGCGUUUGGAACCUGCUCAGAGGGACCUCUAUAGAGAUGUGAUGCUGGAGAAUUACGGGAAUGUGUUCUCACUGGAUCGUGAGACCAGGACUGAAAAUGAUCAAGAAAUUUCUGAAGACACAAGAUCACAUGGGGUCCUACUGGGAAGAUUUCAAAAGGAUAUUUCUCAGGGUCUCAAGUUUAAAGAAGCCUAUGAACGAGAAGUCAGUCUGAAAAGGCCGCUGGGGAACUCCCCUGGAGAAAG2000000006ACUGAACAGGAAAAUGCCAGAUUUUGGUCAAGUGACAGUUGAGGAGAAGCUAACCCCCAGGGGAGAGAGAAGCGAGAAAUAUAAUGAUUUUGGGAACAGCUUCACUGUGAAUUCCAACCUUAUCUCACAUCAGAG2000000006ACUCCCCGUGGGAGACAGACCCCAUAAGUGUGAUGAAUGUAGCAAGAGCUUUAAUCGA2000000006ACUUCAGACCUUAUUCAACAUCAGAGAAUCCACACUGGGGAAAAGCCCUAUGAAUGUAAUGAGUGUGGGAAGGCCUUCAGCCAGAGCUCACACCUUAUUCAGCAUCAGAGAAUCCACACUGGGGAAAAACCUUAUGAAUGUAGUGAUUGUGGGAAAACCUUCAGCUGUAGCUCUGCCCUCAUUCUGCAUCGGAGGAUCCACACGGGGGAGAAACCCUAUGAAUGUAAUGAGUGUGGGAAGACCUUCAGCUGGAGCUCCACCCUCACCCACCAUCAGAGAAUCCACACUGGUGAGAAACCCUACGCCUGCAAUGAAUGUGGGAAGGCCUUCAGCAGGAGCUCAACCCUUAUUCACCAUCAGAGAAUCCACACUGGAGAAAAACCCUAUGAAUGUAAUGAAUGUGGGAAAGCCUUCAGCCAGAGCUCACACCUCUAUCAGCACCAGAGAAUCCACACUGGAGAGAAGCCCUACGAAUGUAUGGAAUGUGGAGGAAAGUUUACCUACAGUUCAGGCCUUAUUCAGCAUCAAAGAAUCCACACCGGGGAGAACCCCUAUGAAUGUAGUGAGUGUGGGAAAGCCUUCAGGUACAGCUCGGCUCUUGUUCGCCAUCAGAGAAUUCACACUGGAGAGAAGCCUUUGAAUGGGAUCGGCAUGAGCAAAAGCUCCCUCAGAGUUACGACCGAGUUAAAUAUCAGAGAGUCCACGUGAAAGAGCCACACACCCAUUUUCCUCACUUUCCCUGAGUCUCAAGAGCUCUUGCCUUACCCUAUAAAUCUCAACAGCUUAGGAUGUGUCCCUUUCAACUCAG2000000006ACUUUUCAUUUUAGAGAAUGGGGCAGAUGGGGCAAAUCGUUGAAUUUUCCCAGAAAUCACACCAGCCUUAGAAAGCGUCAAGGCAAGUGGAUGGCGUGCUGGGAAUAGAAAGCAGCUCUGGGACCAGUUACCCCAUUUAGGAAAGGAGUUUGCACUAA2000000006ACUGUUUUUCUCACAGCAGAGGAACCUUUCCAAGGUGGGGAUGGAAGCACAGUCGGGACAGAAUUCGAUGGAUUCCU2000000009UUAGUUGGAGUCCGCGUAGUCAGCACAGACAGCAGUGGAAAGGACGCUCUGGGUCCUGUUAUUUGCUAGGGAGGGUAAAGGGAGACUAUUUCAAAGCUACUGUUCCUAGUCCAGCU2000000009UUAAGUUUCGGUAAGAAACAUGCUGUUUUGUUUCAUGAUUUCGUUAAUUAUGGAAAUUUGGCAUUGAGGGAUUAUUUUAUUGAGGGUAGAAGAGAUUCCAGAAUCAUCAUCUGUGAUGAUGGUGUCCU2000000009UUAGGGCUCUUGGAGCAGCCAGACCAUGUUUCCAAGAGAAACCUGGUGAUAUUGCCAGCAGACCCCCUGCCAUCCCCCCCAGUUGUCCUGGGGCUGAAUGGGCAAAUCUGUCCAAACAGCUAGUAACCGGCUGUGAGGGAGAGGGUCAGAAGCACUUAGCGUUGGCCUCUGAUUGCUGUCCUCUCUUGUCCUCUUCCCACUCCAAUGAUGAAAAUGAUUUUCUCUAAAUGCCUGGGUAAGGAUGCUUUCAAGGAGCUCACUUGGCCUGCUUGCCCUGCCCUCUCACCUCUGACACCCAGCCCCAGGAGCCAGACCACUCCUGCCUCCACCUCUGACUCUUCAGCAGCUGAAGAUUAAUGCAGAGAAAGAGCAAAGCCCAAAAGGGAGAAAAAAAAAACAAAAAAACAAAAAAACGAAGCCCAGAGAAGGCAGGCUGUGCCUGAGCCUGGUAGCAGAGCUCGUUGCUGGGUGAGGAUGGCACUCCCCGAGUUUUCCCAACCGACGGGAUGACCUUCCAUUGUGUUUUCCCAACCCUGCUCA2000000009UCCUGUAGCAUAAAUGAAGUGCACUAUUAAACAGAAUAGUUUUUCAGAAGAG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	647	782	840	1648	1806	1883	1999	2127	2667
Modification Positions	m6A	m6A	m6A	m6A	m6A	Y	Y	Y	Y
Genomic Coordinates	7:100072043:-	7:100071908:-	7:100071850:-	7:100071042:-	7:100070884:-	7:100070807:-	7:100070691:-	7:100070563:-	7:100070023:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	5Nnepx5V7yHo aHkqKEJkRYyb Ap2q43bQLNek KRfQJWH4K5KH msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 93arJtwJmuS9 BkoLW2CBToyL Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML Yfn77uLS5tv8	Ap2q43bQLNek msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML Yfn77uLS5tv8	6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se nfCHyrYzE6fB KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8