General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000625836
Gene ID:	ENSG00000154978
Gene Name:	VOPP1
Sequence (UNICHARACTER ENCODING)	ACAAUGCUCAGCGAAACUCUUGGGUAUCUGUCUUCUGUGCUCUUGCAGUGCACAGAAGCCAAAAAGCAUUGCUGGUAUUUCGAAGGACUCUAUCCAACCUAUUAUAUAUGCCGCUCCUACGAGGACUGCUGUGGCUCCAGGUGCUGUGUGCGGGCCCUCUCCAUACAGAGGCUGUGGUACUUCUGGUUCCUUCUGAUGAUGGGCGUGCUUUUCUGCUGCGGAGCCGGCUUCUUCAUCCGGAGGCGCAUGUACCCCCCGCCGCUGAUCGAGGAGCCAGCCUUCAAUGUGUCCUACACCAGGCAGCCCCCAAAUCCCGGCCCAGGAGCCCAGCAGCCGGGGCCGCCCUAUUACACCGACCCAGGAGGACCGGGGAUGAACCCUGUCGGGAAUUCCAUGGCAAUGGCUUUCCAGGUCCCACCCAACUCACCCCAGGGGAGUGUGGCCUGCCCGCCCCCUCCAGCCUACUGCAACACGCCUCCGCCCCCGUACGAACAGGUAGUGAAGGCCAAGUAGUGGGGUGCCCACGUGCAAGAGGAGAGACAGGAGAGGGCCUUUCCCUGGCCUUUCUGUCUUCGUUGAUGUUCACUUCCAGGAЖCGGUCUCGUGGGCUGCUAAGGGCAGUUCCUCUGAUAUCCUCACAGCAAGCACAGCUCUCUUUCAGGCUUUCCAUGGAGUACAAUAUAUGAЖCUCACACUUUGUCUCCUCUGUUGCUUCUGUUUCUGACGCAGUCUGUGCUCUCACAUGGUAGUGUGGUGACAGUCCCCGAGGGCUGACGUCCUUACGGUGGCGUGACCAGAUCUACAGGAGAGAGACUGAGAGGAAGAAGGCAGUGCUGGAGGUGCAGGUGGCAUGUAGAGGGGCCAGGCCGAGCAUCCCAGGCAAGCAUCCUUCUGCCCGGGUAUUAAUAGGAAGCCCCAUGCCGGGCGGCUCAGCCGAUGAAGCAGCAGCCGACUGAGCUGAGCCCAGCAGGUCAUCUGCUCCAGCCUGUCCUCUCGUCAGCCUUCCUCUUCCAGAAGCUGUUGGAGAGACAUUCAGGAGAGAGCAAGCCCCUUGUCAUGUUUCUGUCUCUGUUCAUAUCCUAAAGAUAGЖCUUCUCCUGCACCGCCAGGGAAGGGUAGCACGUGCAGCUCUCACCGCAGGAUGGGGCCUAGAAUCAGGCUUGCCUUGGAGGCCUGACAGUGAUCUGACAPCCACUAAGCAAAUUUAUUUAAAUUCAUGGGAAAUCACUUCCUGCCCCAAACUGAGЖCAUUGCAUUUUGUGAGCUCUUGGUCUGAUUUGGAGAAAGGЖCUGUUACCCAUUUUUUUGGUGUGUUUAUGGAAGUGCAUGUAGAGCGUCCUGCCCUUUGAAAUCAGЖCUGGGUGUGUGUCUUCCCUGGACAUCACUGCCUCUCCAGGGCAUUCUCA
Sequence (SHORT NAMES ENCODING)	ACAAUGCUCAGCGAAACUCUUGGGUAUCUGUCUUCUGUGCUCUUGCAGUGCACAGAAGCCAAAAAGCAUUGCUGGUAUUUCGAAGGACUCUAUCCAACCUAUUAUAUAUGCCGCUCCUACGAGGACUGCUGUGGCUCCAGGUGCUGUGUGCGGGCCCUCUCCAUACAGAGGCUGUGGUACUUCUGGUUCCUUCUGAUGAUGGGCGUGCUUUUCUGCUGCGGAGCCGGCUUCUUCAUCCGGAGGCGCAUGUACCCCCCGCCGCUGAUCGAGGAGCCAGCCUUCAAUGUGUCCUACACCAGGCAGCCCCCAAAUCCCGGCCCAGGAGCCCAGCAGCCGGGGCCGCCCUAUUACACCGACCCAGGAGGACCGGGGAUGAACCCUGUCGGGAAUUCCAUGGCAAUGGCUUUCCAGGUCCCACCCAACUCACCCCAGGGGAGUGUGGCCUGCCCGCCCCCUCCAGCCUACUGCAACACGCCUCCGCCCCCGUACGAACAGGUAGUGAAGGCCAAGUAGUGGGGUGCCCACGUGCAAGAGGAGAGACAGGAGAGGGCCUUUCCCUGGCCUUUCUGUCUUCGUUGAUGUUCACUUCCAGGAm6ACGGUCUCGUGGGCUGCUAAGGGCAGUUCCUCUGAUAUCCUCACAGCAAGCACAGCUCUCUUUCAGGCUUUCCAUGGAGUACAAUAUAUGAm6ACUCACACUUUGUCUCCUCUGUUGCUUCUGUUUCUGACGCAGUCUGUGCUCUCACAUGGUAGUGUGGUGACAGUCCCCGAGGGCUGACGUCCUUACGGUGGCGUGACCAGAUCUACAGGAGAGAGACUGAGAGGAAGAAGGCAGUGCUGGAGGUGCAGGUGGCAUGUAGAGGGGCCAGGCCGAGCAUCCCAGGCAAGCAUCCUUCUGCCCGGGUAUUAAUAGGAAGCCCCAUGCCGGGCGGCUCAGCCGAUGAAGCAGCAGCCGACUGAGCUGAGCCCAGCAGGUCAUCUGCUCCAGCCUGUCCUCUCGUCAGCCUUCCUCUUCCAGAAGCUGUUGGAGAGACAUUCAGGAGAGAGCAAGCCCCUUGUCAUGUUUCUGUCUCUGUUCAUAUCCUAAAGAUAGm6ACUUCUCCUGCACCGCCAGGGAAGGGUAGCACGUGCAGCUCUCACCGCAGGAUGGGGCCUAGAAUCAGGCUUGCCUUGGAGGCCUGACAGUGAUCUGACAYCCACUAAGCAAAUUUAUUUAAAUUCAUGGGAAAUCACUUCCUGCCCCAAACUGAGm6ACAUUGCAUUUUGUGAGCUCUUGGUCUGAUUUGGAGAAAGGm6ACUGUUACCCAUUUUUUUGGUGUGUUUAUGGAAGUGCAUGUAGAGCGUCCUGCCCUUUGAAAUCAGm6ACUGGGUGUGUGUCUUCCCUGGACAUCACUGCCUCUCCAGGGCAUUCUCA
Sequence (MODOMICS CODE ENCODING)	ACAAUGCUCAGCGAAACUCUUGGGUAUCUGUCUUCUGUGCUCUUGCAGUGCACAGAAGCCAAAAAGCAUUGCUGGUAUUUCGAAGGACUCUAUCCAACCUAUUAUAUAUGCCGCUCCUACGAGGACUGCUGUGGCUCCAGGUGCUGUGUGCGGGCCCUCUCCAUACAGAGGCUGUGGUACUUCUGGUUCCUUCUGAUGAUGGGCGUGCUUUUCUGCUGCGGAGCCGGCUUCUUCAUCCGGAGGCGCAUGUACCCCCCGCCGCUGAUCGAGGAGCCAGCCUUCAAUGUGUCCUACACCAGGCAGCCCCCAAAUCCCGGCCCAGGAGCCCAGCAGCCGGGGCCGCCCUAUUACACCGACCCAGGAGGACCGGGGAUGAACCCUGUCGGGAAUUCCAUGGCAAUGGCUUUCCAGGUCCCACCCAACUCACCCCAGGGGAGUGUGGCCUGCCCGCCCCCUCCAGCCUACUGCAACACGCCUCCGCCCCCGUACGAACAGGUAGUGAAGGCCAAGUAGUGGGGUGCCCACGUGCAAGAGGAGAGACAGGAGAGGGCCUUUCCCUGGCCUUUCUGUCUUCGUUGAUGUUCACUUCCAGGA2000000006ACGGUCUCGUGGGCUGCUAAGGGCAGUUCCUCUGAUAUCCUCACAGCAAGCACAGCUCUCUUUCAGGCUUUCCAUGGAGUACAAUAUAUGA2000000006ACUCACACUUUGUCUCCUCUGUUGCUUCUGUUUCUGACGCAGUCUGUGCUCUCACAUGGUAGUGUGGUGACAGUCCCCGAGGGCUGACGUCCUUACGGUGGCGUGACCAGAUCUACAGGAGAGAGACUGAGAGGAAGAAGGCAGUGCUGGAGGUGCAGGUGGCAUGUAGAGGGGCCAGGCCGAGCAUCCCAGGCAAGCAUCCUUCUGCCCGGGUAUUAAUAGGAAGCCCCAUGCCGGGCGGCUCAGCCGAUGAAGCAGCAGCCGACUGAGCUGAGCCCAGCAGGUCAUCUGCUCCAGCCUGUCCUCUCGUCAGCCUUCCUCUUCCAGAAGCUGUUGGAGAGACAUUCAGGAGAGAGCAAGCCCCUUGUCAUGUUUCUGUCUCUGUUCAUAUCCUAAAGAUAG2000000006ACUUCUCCUGCACCGCCAGGGAAGGGUAGCACGUGCAGCUCUCACCGCAGGAUGGGGCCUAGAAUCAGGCUUGCCUUGGAGGCCUGACAGUGAUCUGACA2000000009UCCACUAAGCAAAUUUAUUUAAAUUCAUGGGAAAUCACUUCCUGCCCCAAACUGAG2000000006ACAUUGCAUUUUGUGAGCUCUUGGUCUGAUUUGGAGAAAGG2000000006ACUGUUACCCAUUUUUUUGGUGUGUUUAUGGAAGUGCAUGUAGAGCGUCCUGCCCUUUGAAAUCAG2000000006ACUGGGUGUGUGUCUUCCCUGGACAUCACUGCCUCUCCAGGGCAUUCUCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	595	686	1088	1188	1244	1285	1351
Modification Positions	m6A	m6A	m6A	Y	m6A	m6A	m6A
Genomic Coordinates	7:55472773:-	7:55472682:-	7:55472280:-	7:55472180:-	7:55472124:-	7:55472083:-	7:55472017:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6AyXsheySjfx Ap2q43bQLNek msuJfBpJvM5H NjZ8bGGJsNSR V5PvfiKsgFMd VyCX26p5UBRL D6ncpa2PPWj3	aJksAshEgQ8U D6ncpa2PPWj3 KTLz8piFYdwC WiQcrNTGZHPT	6AyXsheySjfx Ap2q43bQLNek nGifePrmgHfe 93arJtwJmuS9 BkoLW2CBToyL WiQcrNTGZHPT BtsJQJ3DteUq	BtsJQJ3DteUq Yfn77uLS5tv8	D6ncpa2PPWj3 WiQcrNTGZHPT KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G ksEP666umrV9 BtsJQJ3DteUq Yfn77uLS5tv8	5FhTyQVy2tKW 6AyXsheySjfx aHkqKEJkRYyb Ap2q43bQLNek gBgcfFQ5WN9C KRfQJWH4K5KH nGifePrmgHfe V5PvfiKsgFMd VyCX26p5UBRL aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se ArijeGVTwYBw BkoLW2CBToyL nfCHyrYzE6fB WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	6AyXsheySjfx Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL KTLz8piFYdwC nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML ksEP666umrV9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8