General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000445866
Gene ID:	ENSG00000127990
Gene Name:	SGCE
Sequence (UNICHARACTER ENCODING)	AGGGAGGGGAGGGGAGAAUCGAGGACGGACGGCCUAGCCAGGCCAAGAAUGCAAUUGCCCCGGUGGUGGGAGCUGGGAGACCCCUGUGCUUGGACGGGACAGGGUCGGGGGACACGCAGGAUGAGCCCCGCGACCACUGGCACAUUCUUGCUGACAGUGUACЖGUAUUUUCUCCAAGGUACACUCCGAUCGGAAUGUAUACCCAUCAGCAGGUGUCCUCUUUGUUCAUGUUUUGGAAAGAGAAUAUUUUAAGGGGGAAUUUCCACCUUACCCAAAACCUGGCGAGAUUAGUAAUGAUCCCAPAЖCAUUUAAUACЖAAUUUAAUGGGUUACCCAGACCGACCUGGAUGGCUUCGAUAUAUCCAAAGGACACCAUAUAGUGAUGGAGUCCUAUAUGGGUCCCCAACAGCUGAAAAUGUGGGGAAGCCAACAAUCAUUGAGAUAЖCUGCCUACAACAGGCGCACCUUUGAGACUGCAAGGCAUAAUUUGAUAAUUAAUAUAAUGUCUGCAGAAGACUUCCCGUUGCCAUAUCAAGCAGAAUUCUUCAUUAAGAAUAUGAAUGUAGAAGAAAUGUUGGCCAGUGAGGUUCUUGGAGACUUUCUUGGCGCAGUGAAAAAUGUGUGGCAGCCAGAGCGCCUGAACGCCAPAAACAUCACAUCGGCCCUAGACAGGGGUGGCAGGGUGCCACUUCCCAUUAAUGACCUGAAGGAGGGCGUUUAUGUCAUGGUUGGUGCAGAUGUCCCGUUUUCUUCUUGUUUACGAGAAGUUGAAAAUCCACAGAAUCAAUUGAGAUGUAGUCAAGAAAUGGAGCCUGUAAUAACAUGUGAUAAAAAAUUUCGUACUCAAUUUUACAUUGACUGGUGCAAAAUUUCAUUGGUUGAUAAAACAAAGCAAGUGUCCACCUAUCAGGAAGUGAUUCGUGGAGAGGGGAUUUUACCUGAUGGUGGAGAAUACAAACCCCCUUCUGAUUCUUUGAAAAGCAGAGACUAUUACACGGAUUUCCUAAUUACACUGGCUGUGCCCUCGGCAGUGGCACUGGUCCUUUUUCUAAUACUUGCUUAUAUCAUGUGCUGCCGACGGGAAGGCGUGGAAAAGAGAAACAUGCAAACACCAGACAPCCAACUGGUCCAUCACAGUGCUAUUCAGAAAUCUACCAAGGAGCUUCGAGACAUGUCCAAGAAUAGAGAGAUAGCAUGGCCCCUGUCAACGCUUCCUGUGUUCCACCCUGUGACUGGGGAAAUCAUACCUCCUPUACACACAGACAACUAUGAUAGCACAAACAUGCCAUUGAUGCAAACGCAGCAAUGGAGUUUCGCUCCUGUUGCCCAGGCUGGAGUGCAAUGGAGCGAUCUUGGCUCACUGCAGCCUCCGCCUCCCAGGAACUUGCCACAUCAGACUCAGAUUCCCCAACAGCAGACUACAGGUAAAUGGUAUCCCUGAAGAAAGAAAACUGACUGAAGCAAUGAAUUUAUAAUCAGACAAUAUAGCAGUUACAUCACAUUUCUUUUCUCUUCCAAUAAUGCAUGAGCUUUUCUGGCAUAUGUUAUGCAUGUUGGCAGUAUUAAGUGUAUACCAAAUAAUACAACAUAЖCUUUCAUUUUACUAAUGUAUUUUUUUGUACUUAAAGCAUUUUUGACAAUUUGUAAAACAUUGAUGACUPUAUAUUUGUUACAAUAAAAGUUGAUCUPUAAAAUAAAUAUUAUUAAUG
Sequence (SHORT NAMES ENCODING)	AGGGAGGGGAGGGGAGAAUCGAGGACGGACGGCCUAGCCAGGCCAAGAAUGCAAUUGCCCCGGUGGUGGGAGCUGGGAGACCCCUGUGCUUGGACGGGACAGGGUCGGGGGACACGCAGGAUGAGCCCCGCGACCACUGGCACAUUCUUGCUGACAGUGUACm6AGUAUUUUCUCCAAGGUACACUCCGAUCGGAAUGUAUACCCAUCAGCAGGUGUCCUCUUUGUUCAUGUUUUGGAAAGAGAAUAUUUUAAGGGGGAAUUUCCACCUUACCCAAAACCUGGCGAGAUUAGUAAUGAUCCCAYAm6ACAUUUAAUACm6AAAUUUAAUGGGUUACCCAGACCGACCUGGAUGGCUUCGAUAUAUCCAAAGGACACCAUAUAGUGAUGGAGUCCUAUAUGGGUCCCCAACAGCUGAAAAUGUGGGGAAGCCAACAAUCAUUGAGAUAm6ACUGCCUACAACAGGCGCACCUUUGAGACUGCAAGGCAUAAUUUGAUAAUUAAUAUAAUGUCUGCAGAAGACUUCCCGUUGCCAUAUCAAGCAGAAUUCUUCAUUAAGAAUAUGAAUGUAGAAGAAAUGUUGGCCAGUGAGGUUCUUGGAGACUUUCUUGGCGCAGUGAAAAAUGUGUGGCAGCCAGAGCGCCUGAACGCCAYAAACAUCACAUCGGCCCUAGACAGGGGUGGCAGGGUGCCACUUCCCAUUAAUGACCUGAAGGAGGGCGUUUAUGUCAUGGUUGGUGCAGAUGUCCCGUUUUCUUCUUGUUUACGAGAAGUUGAAAAUCCACAGAAUCAAUUGAGAUGUAGUCAAGAAAUGGAGCCUGUAAUAACAUGUGAUAAAAAAUUUCGUACUCAAUUUUACAUUGACUGGUGCAAAAUUUCAUUGGUUGAUAAAACAAAGCAAGUGUCCACCUAUCAGGAAGUGAUUCGUGGAGAGGGGAUUUUACCUGAUGGUGGAGAAUACAAACCCCCUUCUGAUUCUUUGAAAAGCAGAGACUAUUACACGGAUUUCCUAAUUACACUGGCUGUGCCCUCGGCAGUGGCACUGGUCCUUUUUCUAAUACUUGCUUAUAUCAUGUGCUGCCGACGGGAAGGCGUGGAAAAGAGAAACAUGCAAACACCAGACAYCCAACUGGUCCAUCACAGUGCUAUUCAGAAAUCUACCAAGGAGCUUCGAGACAUGUCCAAGAAUAGAGAGAUAGCAUGGCCCCUGUCAACGCUUCCUGUGUUCCACCCUGUGACUGGGGAAAUCAUACCUCCUYUACACACAGACAACUAUGAUAGCACAAACAUGCCAUUGAUGCAAACGCAGCAAUGGAGUUUCGCUCCUGUUGCCCAGGCUGGAGUGCAAUGGAGCGAUCUUGGCUCACUGCAGCCUCCGCCUCCCAGGAACUUGCCACAUCAGACUCAGAUUCCCCAACAGCAGACUACAGGUAAAUGGUAUCCCUGAAGAAAGAAAACUGACUGAAGCAAUGAAUUUAUAAUCAGACAAUAUAGCAGUUACAUCACAUUUCUUUUCUCUUCCAAUAAUGCAUGAGCUUUUCUGGCAUAUGUUAUGCAUGUUGGCAGUAUUAAGUGUAUACCAAAUAAUACAACAUAm6ACUUUCAUUUUACUAAUGUAUUUUUUUGUACUUAAAGCAUUUUUGACAAUUUGUAAAACAUUGAUGACUYUAUAUUUGUUACAAUAAAAGUUGAUCUYUAAAAUAAAUAUUAUUAAUG
Sequence (MODOMICS CODE ENCODING)	AGGGAGGGGAGGGGAGAAUCGAGGACGGACGGCCUAGCCAGGCCAAGAAUGCAAUUGCCCCGGUGGUGGGAGCUGGGAGACCCCUGUGCUUGGACGGGACAGGGUCGGGGGACACGCAGGAUGAGCCCCGCGACCACUGGCACAUUCUUGCUGACAGUGUAC2000000006AGUAUUUUCUCCAAGGUACACUCCGAUCGGAAUGUAUACCCAUCAGCAGGUGUCCUCUUUGUUCAUGUUUUGGAAAGAGAAUAUUUUAAGGGGGAAUUUCCACCUUACCCAAAACCUGGCGAGAUUAGUAAUGAUCCCA2000000009UA2000000006ACAUUUAAUAC2000000006AAAUUUAAUGGGUUACCCAGACCGACCUGGAUGGCUUCGAUAUAUCCAAAGGACACCAUAUAGUGAUGGAGUCCUAUAUGGGUCCCCAACAGCUGAAAAUGUGGGGAAGCCAACAAUCAUUGAGAUA2000000006ACUGCCUACAACAGGCGCACCUUUGAGACUGCAAGGCAUAAUUUGAUAAUUAAUAUAAUGUCUGCAGAAGACUUCCCGUUGCCAUAUCAAGCAGAAUUCUUCAUUAAGAAUAUGAAUGUAGAAGAAAUGUUGGCCAGUGAGGUUCUUGGAGACUUUCUUGGCGCAGUGAAAAAUGUGUGGCAGCCAGAGCGCCUGAACGCCA2000000009UAAACAUCACAUCGGCCCUAGACAGGGGUGGCAGGGUGCCACUUCCCAUUAAUGACCUGAAGGAGGGCGUUUAUGUCAUGGUUGGUGCAGAUGUCCCGUUUUCUUCUUGUUUACGAGAAGUUGAAAAUCCACAGAAUCAAUUGAGAUGUAGUCAAGAAAUGGAGCCUGUAAUAACAUGUGAUAAAAAAUUUCGUACUCAAUUUUACAUUGACUGGUGCAAAAUUUCAUUGGUUGAUAAAACAAAGCAAGUGUCCACCUAUCAGGAAGUGAUUCGUGGAGAGGGGAUUUUACCUGAUGGUGGAGAAUACAAACCCCCUUCUGAUUCUUUGAAAAGCAGAGACUAUUACACGGAUUUCCUAAUUACACUGGCUGUGCCCUCGGCAGUGGCACUGGUCCUUUUUCUAAUACUUGCUUAUAUCAUGUGCUGCCGACGGGAAGGCGUGGAAAAGAGAAACAUGCAAACACCAGACA2000000009UCCAACUGGUCCAUCACAGUGCUAUUCAGAAAUCUACCAAGGAGCUUCGAGACAUGUCCAAGAAUAGAGAGAUAGCAUGGCCCCUGUCAACGCUUCCUGUGUUCCACCCUGUGACUGGGGAAAUCAUACCUCCU2000000009UUACACACAGACAACUAUGAUAGCACAAACAUGCCAUUGAUGCAAACGCAGCAAUGGAGUUUCGCUCCUGUUGCCCAGGCUGGAGUGCAAUGGAGCGAUCUUGGCUCACUGCAGCCUCCGCCUCCCAGGAACUUGCCACAUCAGACUCAGAUUCCCCAACAGCAGACUACAGGUAAAUGGUAUCCCUGAAGAAAGAAAACUGACUGAAGCAAUGAAUUUAUAAUCAGACAAUAUAGCAGUUACAUCACAUUUCUUUUCUCUUCCAAUAAUGCAUGAGCUUUUCUGGCAUAUGUUAUGCAUGUUGGCAGUAUUAAGUGUAUACCAAAUAAUACAACAUA2000000006ACUUUCAUUUUACUAAUGUAUUUUUUUGUACUUAAAGCAUUUUUGACAAUUUGUAAAACAUUGAUGACU2000000009UUAUAUUUGUUACAAUAAAAGUUGAUCU2000000009UUAAAAUAAAUAUUAUUAAUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	163	302	304	315	442	644	1115	1249	1587	1656	1684
Modification Positions	m6A	Y	m6A	m6A	m6A	Y	Y	Y	m6A	Y	Y
Genomic Coordinates	7:94629836:-	7:94628338:-	7:94628336:-	7:94628325:-	7:94623394:-	7:94618824:-	7:94598961:-	7:94598827:-	7:94585349:-	7:94585280:-	7:94585252:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr oZ9Kp5NX8Hv5 iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 oZ9Kp5NX8Hv5 iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac