General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000222726
Gene ID:	ENSG00000106004
Gene Name:	HOXA5
Sequence (UNICHARACTER ENCODING)	AUAAAUUGUGCAAGGGUGCUAUAGACGCACAAACGACCGCGAGCCACAAAUCAAGCACACAUAUCAAAAAACAAAUGAGCUCUUAUUUUGUAAЖCUCAUUUUGCGGUCGCUAUCCAAAUGGCCCGGЖCUACCAGUUGCAUAAUUAUGGAGAUCAUAGUUCCGUGAGCGAGCAAUUCAGGGЖCUCGGCGAGCAUGCACUCCGGCAGGUACGGCUACGGCUACAAUGGCAUGGAUCUCAGCGUCGGCCGCUCGGGCUCCGGCCACUUUGGCUCCGGAGAGCGCGCCCGCAGCUACGCUGCCAGCGCCAGCGCGGCGCCCGCCGAGCCCAGGUACAGCCAGCCGGCCACGUCCACGCACUCUCCUCAGCCCGAUCCGCUGCCCUGCUCCGCCGUGGCCCCCUCGCCCGGCAGCGACAGCCACCACGGCGGGAAAAACUCCCUAAGCAACUCCAGCGGCGCCUCGGCCGACGCCGGCAGCACCCACAUCAGCAGCAGAGAGGGGGUUGGCACGGCGUCCGGAGCCGAGGAGGACGCCCCUGCCAGCAGCGAGCAGGCGAGUGCGCAGAGCGAGCCGAGCCCGGCGCCGCCCGCCCAACCCCAGAUCUACCCCUGGAUGCGCAAGCUGCACAUAAGUCAUGACAACAUAGGCGGCCCGGAAGGCAAAAGGGCCCGGACGGCCUACACGCGCUACCAGACCCUGGAGCUGGAGAAGGAGUUCCACUUCAACCGUUACCUGACCCGCAGAAGGAGGAUUGAAAUAGCACAUGCUCUUUGCCUCUCCGAGAGЖCAAAUUAAAAUCUGGUUCCAAAACCGGAGAAUGAAGUGGAAAAAAGAUAAUAAGCUGAAAAGCAUGAGCAUGGCCGCGGCAGGAGGGGCCUUCCGUCCCUGAGUAUCUGAGCGUUUAAAGUЖCUGAGCAGUAUUAGCGGAUCCCGCGUAGUGUCAGUACUAAGGUGЖCUUUCUGAAACUCCCUUGUGUUCCUUCUGUGAAGAAGCCCUGUUCUCGUUGCCCUAAUUCAUCUUUUAAUCAUGAGCCUGUUUAUUGCCAUUAUAGCGCCUGUAUAAGUAGAUCUGCUUUCUGUUCAUCUCUUUGUCCUGAAUGGCUUUGUCUUGAAAAAAAAUAGAUGUUUUAЖCUUAUUUAUAUGAAGCAAGCUGUGUUACUUGAAGUAACUAUAACAAAAAAAGAAAAGAGAAAAAAAAACACACAAAAAGUCCCCCUUCAAUCUCGUUUAGUGCCAAUGUUGUGUGUUGCACUCAAGUUGUUUAACUGUGCAUGUGCGUGGAAGUGUUCCUGUCUCAAUAGCUCCAAGCUGUUAAAGAUAUUUUUAUUCAAACUACCUAUAUUCCUUGUGUAAUUAAUGCUGUUGUAGAGGUGACUUGAUGAGACACAACUUGUUCGACGUGUAGUGACUAGUGACUCUGUGAUGAAAACUGUGACUCCAAGCGGUGUGUCCCUGCGUGCCUPUAUAGGACCCUUUGCACGAЖCUCUGGAAGUGGCUCUUAUAAGCGCAGCUUCAGUGAUGUAUGUUUUUGUGAACAAAGUUACAAAUAUUGUCCAAGUCUGGCUGUUUUAAGCAAACUGUGAUCAGCUUUUUUUUUUUUUUUUUUUUUUUUGUAUUUGUUUUUAAGGAAAAAAUACUGACUGGAACAAAAAAUAAACUUUCUAUUGUAAGUUC
Sequence (SHORT NAMES ENCODING)	AUAAAUUGUGCAAGGGUGCUAUAGACGCACAAACGACCGCGAGCCACAAAUCAAGCACACAUAUCAAAAAACAAAUGAGCUCUUAUUUUGUAAm6ACUCAUUUUGCGGUCGCUAUCCAAAUGGCCCGGm6ACUACCAGUUGCAUAAUUAUGGAGAUCAUAGUUCCGUGAGCGAGCAAUUCAGGGm6ACUCGGCGAGCAUGCACUCCGGCAGGUACGGCUACGGCUACAAUGGCAUGGAUCUCAGCGUCGGCCGCUCGGGCUCCGGCCACUUUGGCUCCGGAGAGCGCGCCCGCAGCUACGCUGCCAGCGCCAGCGCGGCGCCCGCCGAGCCCAGGUACAGCCAGCCGGCCACGUCCACGCACUCUCCUCAGCCCGAUCCGCUGCCCUGCUCCGCCGUGGCCCCCUCGCCCGGCAGCGACAGCCACCACGGCGGGAAAAACUCCCUAAGCAACUCCAGCGGCGCCUCGGCCGACGCCGGCAGCACCCACAUCAGCAGCAGAGAGGGGGUUGGCACGGCGUCCGGAGCCGAGGAGGACGCCCCUGCCAGCAGCGAGCAGGCGAGUGCGCAGAGCGAGCCGAGCCCGGCGCCGCCCGCCCAACCCCAGAUCUACCCCUGGAUGCGCAAGCUGCACAUAAGUCAUGACAACAUAGGCGGCCCGGAAGGCAAAAGGGCCCGGACGGCCUACACGCGCUACCAGACCCUGGAGCUGGAGAAGGAGUUCCACUUCAACCGUUACCUGACCCGCAGAAGGAGGAUUGAAAUAGCACAUGCUCUUUGCCUCUCCGAGAGm6ACAAAUUAAAAUCUGGUUCCAAAACCGGAGAAUGAAGUGGAAAAAAGAUAAUAAGCUGAAAAGCAUGAGCAUGGCCGCGGCAGGAGGGGCCUUCCGUCCCUGAGUAUCUGAGCGUUUAAAGUm6ACUGAGCAGUAUUAGCGGAUCCCGCGUAGUGUCAGUACUAAGGUGm6ACUUUCUGAAACUCCCUUGUGUUCCUUCUGUGAAGAAGCCCUGUUCUCGUUGCCCUAAUUCAUCUUUUAAUCAUGAGCCUGUUUAUUGCCAUUAUAGCGCCUGUAUAAGUAGAUCUGCUUUCUGUUCAUCUCUUUGUCCUGAAUGGCUUUGUCUUGAAAAAAAAUAGAUGUUUUAm6ACUUAUUUAUAUGAAGCAAGCUGUGUUACUUGAAGUAACUAUAACAAAAAAAGAAAAGAGAAAAAAAAACACACAAAAAGUCCCCCUUCAAUCUCGUUUAGUGCCAAUGUUGUGUGUUGCACUCAAGUUGUUUAACUGUGCAUGUGCGUGGAAGUGUUCCUGUCUCAAUAGCUCCAAGCUGUUAAAGAUAUUUUUAUUCAAACUACCUAUAUUCCUUGUGUAAUUAAUGCUGUUGUAGAGGUGACUUGAUGAGACACAACUUGUUCGACGUGUAGUGACUAGUGACUCUGUGAUGAAAACUGUGACUCCAAGCGGUGUGUCCCUGCGUGCCUYUAUAGGACCCUUUGCACGAm6ACUCUGGAAGUGGCUCUUAUAAGCGCAGCUUCAGUGAUGUAUGUUUUUGUGAACAAAGUUACAAAUAUUGUCCAAGUCUGGCUGUUUUAAGCAAACUGUGAUCAGCUUUUUUUUUUUUUUUUUUUUUUUUGUAUUUGUUUUUAAGGAAAAAAUACUGACUGGAACAAAAAAUAAACUUUCUAUUGUAAGUUC
Sequence (MODOMICS CODE ENCODING)	AUAAAUUGUGCAAGGGUGCUAUAGACGCACAAACGACCGCGAGCCACAAAUCAAGCACACAUAUCAAAAAACAAAUGAGCUCUUAUUUUGUAA2000000006ACUCAUUUUGCGGUCGCUAUCCAAAUGGCCCGG2000000006ACUACCAGUUGCAUAAUUAUGGAGAUCAUAGUUCCGUGAGCGAGCAAUUCAGGG2000000006ACUCGGCGAGCAUGCACUCCGGCAGGUACGGCUACGGCUACAAUGGCAUGGAUCUCAGCGUCGGCCGCUCGGGCUCCGGCCACUUUGGCUCCGGAGAGCGCGCCCGCAGCUACGCUGCCAGCGCCAGCGCGGCGCCCGCCGAGCCCAGGUACAGCCAGCCGGCCACGUCCACGCACUCUCCUCAGCCCGAUCCGCUGCCCUGCUCCGCCGUGGCCCCCUCGCCCGGCAGCGACAGCCACCACGGCGGGAAAAACUCCCUAAGCAACUCCAGCGGCGCCUCGGCCGACGCCGGCAGCACCCACAUCAGCAGCAGAGAGGGGGUUGGCACGGCGUCCGGAGCCGAGGAGGACGCCCCUGCCAGCAGCGAGCAGGCGAGUGCGCAGAGCGAGCCGAGCCCGGCGCCGCCCGCCCAACCCCAGAUCUACCCCUGGAUGCGCAAGCUGCACAUAAGUCAUGACAACAUAGGCGGCCCGGAAGGCAAAAGGGCCCGGACGGCCUACACGCGCUACCAGACCCUGGAGCUGGAGAAGGAGUUCCACUUCAACCGUUACCUGACCCGCAGAAGGAGGAUUGAAAUAGCACAUGCUCUUUGCCUCUCCGAGAG2000000006ACAAAUUAAAAUCUGGUUCCAAAACCGGAGAAUGAAGUGGAAAAAAGAUAAUAAGCUGAAAAGCAUGAGCAUGGCCGCGGCAGGAGGGGCCUUCCGUCCCUGAGUAUCUGAGCGUUUAAAGU2000000006ACUGAGCAGUAUUAGCGGAUCCCGCGUAGUGUCAGUACUAAGGUG2000000006ACUUUCUGAAACUCCCUUGUGUUCCUUCUGUGAAGAAGCCCUGUUCUCGUUGCCCUAAUUCAUCUUUUAAUCAUGAGCCUGUUUAUUGCCAUUAUAGCGCCUGUAUAAGUAGAUCUGCUUUCUGUUCAUCUCUUUGUCCUGAAUGGCUUUGUCUUGAAAAAAAAUAGAUGUUUUA2000000006ACUUAUUUAUAUGAAGCAAGCUGUGUUACUUGAAGUAACUAUAACAAAAAAAGAAAAGAGAAAAAAAAACACACAAAAAGUCCCCCUUCAAUCUCGUUUAGUGCCAAUGUUGUGUGUUGCACUCAAGUUGUUUAACUGUGCAUGUGCGUGGAAGUGUUCCUGUCUCAAUAGCUCCAAGCUGUUAAAGAUAUUUUUAUUCAAACUACCUAUAUUCCUUGUGUAAUUAAUGCUGUUGUAGAGGUGACUUGAUGAGACACAACUUGUUCGACGUGUAGUGACUAGUGACUCUGUGAUGAAAACUGUGACUCCAAGCGGUGUGUCCCUGCGUGCCU2000000009UUAUAGGACCCUUUGCACGA2000000006ACUCUGGAAGUGGCUCUUAUAAGCGCAGCUUCAGUGAUGUAUGUUUUUGUGAACAAAGUUACAAAUAUUGUCCAAGUCUGGCUGUUUUAAGCAAACUGUGAUCAGCUUUUUUUUUUUUUUUUUUUUUUUUGUAUUUGUUUUUAAGGAAAAAAUACUGACUGGAACAAAAAAUAAACUUUCUAUUGUAAGUUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	94	127	181	785	907	952	1127	1459	1479
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	7:27143588:-	7:27143555:-	7:27143501:-	7:27141937:-	7:27141815:-	7:27141770:-	7:27141595:-	7:27141263:-	7:27141243:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	4HMi5ykupT9V 5aTkEfEpX8Xm gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb Ap2q43bQLNek msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb Ap2q43bQLNek gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 BtsJQJ3DteUq Yfn77uLS5tv8	6AyXsheySjfx aHkqKEJkRYyb Ap2q43bQLNek gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx Ap2q43bQLNek gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Lny8GcCeVGc9 834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8