General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000479257
Gene ID:	ENSG00000128595
Gene Name:	CALU
Sequence (UNICHARACTER ENCODING)	APCCUGUGCUGUGGGGGCUACGAGGAAAGGACCUCCCACCCUCCCCCACUGAGCUGCCUUCCCAGUGAUGAAAGAAAAAAUGUAAAAGCCUGAAAACCCUUCUUCUUGAUUUUUAAUUUUUUUUUUUCCCUCUAAGЖCCUUAACCACUCUGGAUAGUAUCACGGGGUAUCAGUAGAGUGUGCUAAACAGAUGUGUACUCUGCAGCUUCUUUGCAGGUUUUUUGUCACAUUUUUCAGUCAAGUGUUCCAGCUUUGUGCUUGUUCAUUAGAGUCACCUGUGACUACAGAGAUUCUGAAAGUUUGAAUCAGGGCCUGGGAAUCUGUACUUUGAЖCAGUACUACAGGUGGUAUUUAUGCCUAGGCAAGUAUGGGAAACAACUGUGCAGAAGGAUAAAGЖCGUUCUUAUCUAUGACUAGACCAUCUGAAUGAUUUGGCCUUUGAAGGUGACUCAAGGUUGAGCCUGGAUGUUGGAGACUUGGUGCUAUAGACCAAGGAAGCUGCCAAGUAUUUCGCUGGUUCCUAAUCUCAUGAACAUCAGAAUCACCUGAAAAACAUUUAAAGCUACGAAUGUCUGAAUUCAGCUUCAGAGЖCUCUAAAUCAAUAGGAGAAACUUAAAGCUUCCUAGAUGAUUCUAAUAACCAGCCAUGUUUGAAGACCAGACCACCAAUGCGUACAAGAAGUAAAGGAUUUGGAGUCAACAUUUAAACCUUGGUUCUUUCACUUUUAAUUCUUAUGAACUUGGGCAAAAGGAUUAAAAUUCUACUUUGGUAUCUUUUGAAAGAAAACAGAAAGUGGACAUUUUAACUAUAAGUUUCUUAUCAGCCUACAAUCAGAUGAAGGAAACUGAUCUAAUUAUCAUGGACCUGCGACAGUUUCUUAUGUGCCUGUCCCUGUGCACAGCCUUUGCCUUGAGCAAACCCACAGAAAAGAAGGACCGUGUACAUCAUGAGCCUCAGCUCAGUGACAAGGUUCACAAUGAUGCUCAGAGUUUUGAUUAUGACCAUGAUGCCUUCUUGGGUGCUGAAGAAGCAAAGACCUUUGAUCAGCUGACACCAGAAGAGAGCAAGGAAAGGCUUGGAAAGAUUGUAAGUAAAAUAGAUGGCGACAAGGACGGGUUUGUCACUGUGGAUGAGCUCAAAGACUGGAUUAAAUUUGCACAAAAGCGCUGGAUUUACGAGGAUGUAGAGCGACAGUGGAAGGGGCAUGACCUCAAUGAGGACGGCCUCGUUUCCUGGGAGGAGUAUAAAAAUGCCACCUACGGCUACGUUUUAGAUGAUCCAGAUCCUGAUGAUGGAUUUAACUAUAAЖCAGAUGAUGGUUAGAGAUGAGCGGAGGUUUAAAAUGGCAGACAAGGAUGGAGACCUCAUUGCCACCAAGGAGGAGUUCACAGCUUUCCUGCACCCUGAGGAGUAUGACUACAUGAAAGAUAUAGUAGUACAGGAAACAAUGGAAGAUAUAGAUAAGAAUGCUGAUGGUUUCAUUGAUCUAGAAGAGUAUAUUGGUGACAUGUACAGCCAUGAUGGGAAUACUGAUGAGCCAGAAUGGGUAAAGACAGAGCGAGAGCAGUUUGUUGAGUUUCGGGAUAAGAACCGUGAUGGGAAGAUGGACAAGGAAGAGACCAAAGACUGGAUCCUUCCCUCAGACUAUGAUCAUGCAGAGGCAGAAGCCAGGCACCUGGUCUAUGAAUCAGACCAAAACAAGGAUGGCAAGCUUACCAAGGAGGAGAUCGUUGACAAGUAUGACUUAUUUGUUGGCAGCCAGGCCACAGAUUUUGGGGAGGCCUUAGUACGGCAUGAUGAGUUCUGAGCUACGGAGGAACCCUCAUUUCCUCAAAAGUAAUUUAUUUUUACAGCUUCUGGUUUCACAUGAAAUUGUUUGCGCUACUGAGЖCUGUUACUACAAЖCUUUUUAAGACAUGAAAAGGCGUAAUGAAAACCAUCCCGUCCCCAUUCCPCCUCCUCUCUGAGGGACUGGAGGGAAGCCGUGCUUCUGAGGAACAACUCUAAUUAGUACACUUGUGUUUGUAGAUUUACACUUUGUAUUAUGUAUUAACAUGGCGUGUUUAUUUUUGUAUUUUUCUCUGGUUGGGAGUAUGAUAUGAAGGAUCAAGAUCCUCAACUCACACAUGUAGЖCAAACAUUAGCUCUPUACUCUUUCUCAACCCCUUUUAUGAUUUUAAUAAUUCUCACUUAЖCUAAUUUUGUAAGCCUGAGAUCAAUAAGAAAUGUUCAGGAGAGAGGAAAGAAAAAAAAUAUAUGCUCCACAAUUUAUAUUUAGAGAGAGAACACUUAGUCUUGCCUGUCAAAAAGUCCAACAUUUCAUAGGUAGUAGGGGCCACAUAUUACAUUCAGUUGCUAUAGGUCCAGCAACUGAACCUGCCAUUACCUGGGCAAGGAAAGAUCCCUUUGCUCUAGGAAAGCUUGGCCCAAAUUGAUUUUCUUCUUUUUCCCCCUGUAGGACUGACUGUUGGCUAAUUUUGUCAAGCACAGCUGUGGUGGGAAGAGUUAGGGCCAGUGUCUUGAAAAUCAAUCAAGUAGUGAAUGUGAUCUCUUUGCAGAGCUAUAGAUAGAAACAGCUGG
Sequence (SHORT NAMES ENCODING)	AYCCUGUGCUGUGGGGGCUACGAGGAAAGGACCUCCCACCCUCCCCCACUGAGCUGCCUUCCCAGUGAUGAAAGAAAAAAUGUAAAAGCCUGAAAACCCUUCUUCUUGAUUUUUAAUUUUUUUUUUUCCCUCUAAGm6ACCUUAACCACUCUGGAUAGUAUCACGGGGUAUCAGUAGAGUGUGCUAAACAGAUGUGUACUCUGCAGCUUCUUUGCAGGUUUUUUGUCACAUUUUUCAGUCAAGUGUUCCAGCUUUGUGCUUGUUCAUUAGAGUCACCUGUGACUACAGAGAUUCUGAAAGUUUGAAUCAGGGCCUGGGAAUCUGUACUUUGAm6ACAGUACUACAGGUGGUAUUUAUGCCUAGGCAAGUAUGGGAAACAACUGUGCAGAAGGAUAAAGm6ACGUUCUUAUCUAUGACUAGACCAUCUGAAUGAUUUGGCCUUUGAAGGUGACUCAAGGUUGAGCCUGGAUGUUGGAGACUUGGUGCUAUAGACCAAGGAAGCUGCCAAGUAUUUCGCUGGUUCCUAAUCUCAUGAACAUCAGAAUCACCUGAAAAACAUUUAAAGCUACGAAUGUCUGAAUUCAGCUUCAGAGm6ACUCUAAAUCAAUAGGAGAAACUUAAAGCUUCCUAGAUGAUUCUAAUAACCAGCCAUGUUUGAAGACCAGACCACCAAUGCGUACAAGAAGUAAAGGAUUUGGAGUCAACAUUUAAACCUUGGUUCUUUCACUUUUAAUUCUUAUGAACUUGGGCAAAAGGAUUAAAAUUCUACUUUGGUAUCUUUUGAAAGAAAACAGAAAGUGGACAUUUUAACUAUAAGUUUCUUAUCAGCCUACAAUCAGAUGAAGGAAACUGAUCUAAUUAUCAUGGACCUGCGACAGUUUCUUAUGUGCCUGUCCCUGUGCACAGCCUUUGCCUUGAGCAAACCCACAGAAAAGAAGGACCGUGUACAUCAUGAGCCUCAGCUCAGUGACAAGGUUCACAAUGAUGCUCAGAGUUUUGAUUAUGACCAUGAUGCCUUCUUGGGUGCUGAAGAAGCAAAGACCUUUGAUCAGCUGACACCAGAAGAGAGCAAGGAAAGGCUUGGAAAGAUUGUAAGUAAAAUAGAUGGCGACAAGGACGGGUUUGUCACUGUGGAUGAGCUCAAAGACUGGAUUAAAUUUGCACAAAAGCGCUGGAUUUACGAGGAUGUAGAGCGACAGUGGAAGGGGCAUGACCUCAAUGAGGACGGCCUCGUUUCCUGGGAGGAGUAUAAAAAUGCCACCUACGGCUACGUUUUAGAUGAUCCAGAUCCUGAUGAUGGAUUUAACUAUAAm6ACAGAUGAUGGUUAGAGAUGAGCGGAGGUUUAAAAUGGCAGACAAGGAUGGAGACCUCAUUGCCACCAAGGAGGAGUUCACAGCUUUCCUGCACCCUGAGGAGUAUGACUACAUGAAAGAUAUAGUAGUACAGGAAACAAUGGAAGAUAUAGAUAAGAAUGCUGAUGGUUUCAUUGAUCUAGAAGAGUAUAUUGGUGACAUGUACAGCCAUGAUGGGAAUACUGAUGAGCCAGAAUGGGUAAAGACAGAGCGAGAGCAGUUUGUUGAGUUUCGGGAUAAGAACCGUGAUGGGAAGAUGGACAAGGAAGAGACCAAAGACUGGAUCCUUCCCUCAGACUAUGAUCAUGCAGAGGCAGAAGCCAGGCACCUGGUCUAUGAAUCAGACCAAAACAAGGAUGGCAAGCUUACCAAGGAGGAGAUCGUUGACAAGUAUGACUUAUUUGUUGGCAGCCAGGCCACAGAUUUUGGGGAGGCCUUAGUACGGCAUGAUGAGUUCUGAGCUACGGAGGAACCCUCAUUUCCUCAAAAGUAAUUUAUUUUUACAGCUUCUGGUUUCACAUGAAAUUGUUUGCGCUACUGAGm6ACUGUUACUACAAm6ACUUUUUAAGACAUGAAAAGGCGUAAUGAAAACCAUCCCGUCCCCAUUCCYCCUCCUCUCUGAGGGACUGGAGGGAAGCCGUGCUUCUGAGGAACAACUCUAAUUAGUACACUUGUGUUUGUAGAUUUACACUUUGUAUUAUGUAUUAACAUGGCGUGUUUAUUUUUGUAUUUUUCUCUGGUUGGGAGUAUGAUAUGAAGGAUCAAGAUCCUCAACUCACACAUGUAGm6ACAAACAUUAGCUCUYUACUCUUUCUCAACCCCUUUUAUGAUUUUAAUAAUUCUCACUUAm6ACUAAUUUUGUAAGCCUGAGAUCAAUAAGAAAUGUUCAGGAGAGAGGAAAGAAAAAAAAUAUAUGCUCCACAAUUUAUAUUUAGAGAGAGAACACUUAGUCUUGCCUGUCAAAAAGUCCAACAUUUCAUAGGUAGUAGGGGCCACAUAUUACAUUCAGUUGCUAUAGGUCCAGCAACUGAACCUGCCAUUACCUGGGCAAGGAAAGAUCCCUUUGCUCUAGGAAAGCUUGGCCCAAAUUGAUUUUCUUCUUUUUCCCCCUGUAGGACUGACUGUUGGCUAAUUUUGUCAAGCACAGCUGUGGUGGGAAGAGUUAGGGCCAGUGUCUUGAAAAUCAAUCAAGUAGUGAAUGUGAUCUCUUUGCAGAGCUAUAGAUAGAAACAGCUGG
Sequence (MODOMICS CODE ENCODING)	A2000000009UCCUGUGCUGUGGGGGCUACGAGGAAAGGACCUCCCACCCUCCCCCACUGAGCUGCCUUCCCAGUGAUGAAAGAAAAAAUGUAAAAGCCUGAAAACCCUUCUUCUUGAUUUUUAAUUUUUUUUUUUCCCUCUAAG2000000006ACCUUAACCACUCUGGAUAGUAUCACGGGGUAUCAGUAGAGUGUGCUAAACAGAUGUGUACUCUGCAGCUUCUUUGCAGGUUUUUUGUCACAUUUUUCAGUCAAGUGUUCCAGCUUUGUGCUUGUUCAUUAGAGUCACCUGUGACUACAGAGAUUCUGAAAGUUUGAAUCAGGGCCUGGGAAUCUGUACUUUGA2000000006ACAGUACUACAGGUGGUAUUUAUGCCUAGGCAAGUAUGGGAAACAACUGUGCAGAAGGAUAAAG2000000006ACGUUCUUAUCUAUGACUAGACCAUCUGAAUGAUUUGGCCUUUGAAGGUGACUCAAGGUUGAGCCUGGAUGUUGGAGACUUGGUGCUAUAGACCAAGGAAGCUGCCAAGUAUUUCGCUGGUUCCUAAUCUCAUGAACAUCAGAAUCACCUGAAAAACAUUUAAAGCUACGAAUGUCUGAAUUCAGCUUCAGAG2000000006ACUCUAAAUCAAUAGGAGAAACUUAAAGCUUCCUAGAUGAUUCUAAUAACCAGCCAUGUUUGAAGACCAGACCACCAAUGCGUACAAGAAGUAAAGGAUUUGGAGUCAACAUUUAAACCUUGGUUCUUUCACUUUUAAUUCUUAUGAACUUGGGCAAAAGGAUUAAAAUUCUACUUUGGUAUCUUUUGAAAGAAAACAGAAAGUGGACAUUUUAACUAUAAGUUUCUUAUCAGCCUACAAUCAGAUGAAGGAAACUGAUCUAAUUAUCAUGGACCUGCGACAGUUUCUUAUGUGCCUGUCCCUGUGCACAGCCUUUGCCUUGAGCAAACCCACAGAAAAGAAGGACCGUGUACAUCAUGAGCCUCAGCUCAGUGACAAGGUUCACAAUGAUGCUCAGAGUUUUGAUUAUGACCAUGAUGCCUUCUUGGGUGCUGAAGAAGCAAAGACCUUUGAUCAGCUGACACCAGAAGAGAGCAAGGAAAGGCUUGGAAAGAUUGUAAGUAAAAUAGAUGGCGACAAGGACGGGUUUGUCACUGUGGAUGAGCUCAAAGACUGGAUUAAAUUUGCACAAAAGCGCUGGAUUUACGAGGAUGUAGAGCGACAGUGGAAGGGGCAUGACCUCAAUGAGGACGGCCUCGUUUCCUGGGAGGAGUAUAAAAAUGCCACCUACGGCUACGUUUUAGAUGAUCCAGAUCCUGAUGAUGGAUUUAACUAUAA2000000006ACAGAUGAUGGUUAGAGAUGAGCGGAGGUUUAAAAUGGCAGACAAGGAUGGAGACCUCAUUGCCACCAAGGAGGAGUUCACAGCUUUCCUGCACCCUGAGGAGUAUGACUACAUGAAAGAUAUAGUAGUACAGGAAACAAUGGAAGAUAUAGAUAAGAAUGCUGAUGGUUUCAUUGAUCUAGAAGAGUAUAUUGGUGACAUGUACAGCCAUGAUGGGAAUACUGAUGAGCCAGAAUGGGUAAAGACAGAGCGAGAGCAGUUUGUUGAGUUUCGGGAUAAGAACCGUGAUGGGAAGAUGGACAAGGAAGAGACCAAAGACUGGAUCCUUCCCUCAGACUAUGAUCAUGCAGAGGCAGAAGCCAGGCACCUGGUCUAUGAAUCAGACCAAAACAAGGAUGGCAAGCUUACCAAGGAGGAGAUCGUUGACAAGUAUGACUUAUUUGUUGGCAGCCAGGCCACAGAUUUUGGGGAGGCCUUAGUACGGCAUGAUGAGUUCUGAGCUACGGAGGAACCCUCAUUUCCUCAAAAGUAAUUUAUUUUUACAGCUUCUGGUUUCACAUGAAAUUGUUUGCGCUACUGAG2000000006ACUGUUACUACAA2000000006ACUUUUUAAGACAUGAAAAGGCGUAAUGAAAACCAUCCCGUCCCCAUUCC2000000009UCCUCCUCUCUGAGGGACUGGAGGGAAGCCGUGCUUCUGAGGAACAACUCUAAUUAGUACACUUGUGUUUGUAGAUUUACACUUUGUAUUAUGUAUUAACAUGGCGUGUUUAUUUUUGUAUUUUUCUCUGGUUGGGAGUAUGAUAUGAAGGAUCAAGAUCCUCAACUCACACAUGUAG2000000006ACAAACAUUAGCUCU2000000009UUACUCUUUCUCAACCCCUUUUAUGAUUUUAAUAAUUCUCACUUA2000000006ACUAAUUUUGUAAGCCUGAGAUCAAUAAGAAAUGUUCAGGAGAGAGGAAAGAAAAAAAAUAUAUGCUCCACAAUUUAUAUUUAGAGAGAGAACACUUAGUCUUGCCUGUCAAAAAGUCCAACAUUUCAUAGGUAGUAGGGGCCACAUAUUACAUUCAGUUGCUAUAGGUCCAGCAACUGAACCUGCCAUUACCUGGGCAAGGAAAGAUCCCUUUGCUCUAGGAAAGCUUGGCCCAAAUUGAUUUUCUUCUUUUUCCCCCUGUAGGACUGACUGUUGGCUAAUUUUGUCAAGCACAGCUGUGGUGGGAAGAGUUAGGGCCAGUGUCUUGAAAAUCAAUCAAGUAGUGAAUGUGAUCUCUUUGCAGAGCUAUAGAUAGAAACAGCUGG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	2	137	331	395	588	1305	1886	1899	1949	2127	2142	2187
Modification Positions	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A	Y	m6A
Genomic Coordinates	7:128739405:+	7:128747660:+	7:128747854:+	7:128747918:+	7:128748111:+	7:128758905:+	7:128769250:+	7:128769263:+	7:128769313:+	7:128769491:+	7:128769506:+	7:128769551:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 iezFbUdmY3A6 Yfn77uLS5tv8	msuJfBpJvM5H 8cMbzB4aD5Se ArijeGVTwYBw WiQcrNTGZHPT Lny8GcCeVGc9	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G	Lny8GcCeVGc9 UKen6WEino9G	KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se 93arJtwJmuS9 BkoLW2CBToyL nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	ArijeGVTwYBw KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8