General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000564834
Gene ID:	ENSG00000261455
Gene Name:	LINC01003
Sequence (UNICHARACTER ENCODING)	AUGGGAGGGCGGGCCGGGGCGAGGGCGGGGAAUUAGGCGGUGCGAGGCCAAUGGGAGGGCGGGCCGGGUCCUCUGGGCUGAGGCGGGGUGCCAGGCGGCACGAAGCCAGUGGGAGGGUGAGUUAGGGGCAGGGGCGGGGUCCCAAGCCAAUGGAAGGGUGAUACCGAGAGGGCGGGGCGCCAGGCGGCGAGAGAGCCAAUGGGAGGCCGAGCCGAGGACCGCGGGCGGUGGGCCUCCCCCCGAGAGGAGGGAGACCCGGAAGGCGGUGGGGGCGGGGAGUGGAGCUGACAACCUGUCAAAUCCACUUUGGGACGAACUAGGUCACGCGCUCCGCGGGUCGGGCACCCCCGCCCGCCAGGCACGGCCGCGGCUCCUUCCUCUUCCUGCCCGCGGUAGUGGGGGUGGGGCAGGCCUCGGGACACCUGCCUCCGCCGCCGGCCGCCGGCCGCCGUCCUCGCGCGGCUUCCCGGGCGGCUCUGCCCCGACCGUAGACUCCCGGCCCGCUCGCCGCGGCAGGAGCCGUGGUUCCGCGGACCUGGGCGCGCUCUCUCCCUGGCCACUGGGAGACCCCCCGCGGCCUCGCGGGGAAAACCUCGGGЖCUGCCCCGCGCCCCCGGCCGUCUCUGCGUCGCUCCUUCUCGCCCGCGACCGUGGЖCUCGUCCUCGCGAGCCUGGGUUGGCGGAAGCUGCGGGGGCCGGGGUCGCACUACUUGGCGCGGAAGGGCCGGCGGUGGGCGGAGGGAUCCCCGUCCGCGGGGUGAGCCGCUGGGCGGAGCCGGGAGGAGCCGCGAGGAUCCGCAGUGGGGAGCCGGGAGGAACCUGGCGCCGGCACCCACCCGCCGCGCCCACGCGUGCCGCGGUCGCUUGUUUCCCGCGGGAGCCCGGCCGCGCUCGGGGGGAGGCGCGCGCGCAGCUGGGGCUGCCUGGGUCUAGGAGCUCCGGAGCCACCGUUUUGUGCCCGUGGAGCCGCGGGGAAGGCGCACGCGCUCGGGUCUUCCCGGCGGGUCGUCCUGCACUUUCUCCCUCUCCGGUACGGЖCCGCGGCGUUCUGUUUCCAGGCAAAGGAAAAUAAGUCAAAGЖCUCAGAAGGCAGCCUGAAUCCAGGGCCUGGGAUGCAGGGUUUGCUGGAACGCCAGCCGGUGCGAUCGCGCCCCUGGGAUUCCGCUUAGCCCGCGCGUCCAUUUCCCUGCAUGGUGGЖCUCAGUAAAGCCGGAUCUGUCCAACGCCUGCAGCGUGGAUGUGGAGGCGGЖCUAAUCAACUAGUGCUCUGUUAUUAUUUCUACCCAUCCCUUUUCUCCAUGCUAAUUUGCUUAGAACUPUAACAUUGAAUGGЖCAGCAAAUGUCAUGUUCUGUUUAAUUAUCACUCCUUGACCAUUAUGUUAAUUUCUUUCCCUAACAAGGUGACGCAUUGUUUUAAGUAACAAUGACCAACUCAUCUACUCUUCUUCCAAAUUGUGUAAAUUGAAGGGUAAAAUGUGGGAAAACGCUAAAUUUGAAUGCUAAAUUUGAACAUUUCACACAACAAUAAUUUGAAAUGCUUCUUUGCAAUAUUAUGGCGUUUCGGAACAGAUAAAAAUACUUCAUUUUCAGACAUUUGGUCAACAAAUACUUCUUGGACGUUUAUAUGCAAAGCAAUGCAUGUAACAUUUUCAUUACUUUGCAAGUGUGCUUAUCAGUAAAAGAAUUUUGUUUUAAAUUCUAGCCUUCGUUUAAAUGUAUUUUAGUUACCACAUUGGGAAGAAAAUAAAAUAUUACUAUGUACGGAAUGUA
Sequence (SHORT NAMES ENCODING)	AUGGGAGGGCGGGCCGGGGCGAGGGCGGGGAAUUAGGCGGUGCGAGGCCAAUGGGAGGGCGGGCCGGGUCCUCUGGGCUGAGGCGGGGUGCCAGGCGGCACGAAGCCAGUGGGAGGGUGAGUUAGGGGCAGGGGCGGGGUCCCAAGCCAAUGGAAGGGUGAUACCGAGAGGGCGGGGCGCCAGGCGGCGAGAGAGCCAAUGGGAGGCCGAGCCGAGGACCGCGGGCGGUGGGCCUCCCCCCGAGAGGAGGGAGACCCGGAAGGCGGUGGGGGCGGGGAGUGGAGCUGACAACCUGUCAAAUCCACUUUGGGACGAACUAGGUCACGCGCUCCGCGGGUCGGGCACCCCCGCCCGCCAGGCACGGCCGCGGCUCCUUCCUCUUCCUGCCCGCGGUAGUGGGGGUGGGGCAGGCCUCGGGACACCUGCCUCCGCCGCCGGCCGCCGGCCGCCGUCCUCGCGCGGCUUCCCGGGCGGCUCUGCCCCGACCGUAGACUCCCGGCCCGCUCGCCGCGGCAGGAGCCGUGGUUCCGCGGACCUGGGCGCGCUCUCUCCCUGGCCACUGGGAGACCCCCCGCGGCCUCGCGGGGAAAACCUCGGGm6ACUGCCCCGCGCCCCCGGCCGUCUCUGCGUCGCUCCUUCUCGCCCGCGACCGUGGm6ACUCGUCCUCGCGAGCCUGGGUUGGCGGAAGCUGCGGGGGCCGGGGUCGCACUACUUGGCGCGGAAGGGCCGGCGGUGGGCGGAGGGAUCCCCGUCCGCGGGGUGAGCCGCUGGGCGGAGCCGGGAGGAGCCGCGAGGAUCCGCAGUGGGGAGCCGGGAGGAACCUGGCGCCGGCACCCACCCGCCGCGCCCACGCGUGCCGCGGUCGCUUGUUUCCCGCGGGAGCCCGGCCGCGCUCGGGGGGAGGCGCGCGCGCAGCUGGGGCUGCCUGGGUCUAGGAGCUCCGGAGCCACCGUUUUGUGCCCGUGGAGCCGCGGGGAAGGCGCACGCGCUCGGGUCUUCCCGGCGGGUCGUCCUGCACUUUCUCCCUCUCCGGUACGGm6ACCGCGGCGUUCUGUUUCCAGGCAAAGGAAAAUAAGUCAAAGm6ACUCAGAAGGCAGCCUGAAUCCAGGGCCUGGGAUGCAGGGUUUGCUGGAACGCCAGCCGGUGCGAUCGCGCCCCUGGGAUUCCGCUUAGCCCGCGCGUCCAUUUCCCUGCAUGGUGGm6ACUCAGUAAAGCCGGAUCUGUCCAACGCCUGCAGCGUGGAUGUGGAGGCGGm6ACUAAUCAACUAGUGCUCUGUUAUUAUUUCUACCCAUCCCUUUUCUCCAUGCUAAUUUGCUUAGAACUYUAACAUUGAAUGGm6ACAGCAAAUGUCAUGUUCUGUUUAAUUAUCACUCCUUGACCAUUAUGUUAAUUUCUUUCCCUAACAAGGUGACGCAUUGUUUUAAGUAACAAUGACCAACUCAUCUACUCUUCUUCCAAAUUGUGUAAAUUGAAGGGUAAAAUGUGGGAAAACGCUAAAUUUGAAUGCUAAAUUUGAACAUUUCACACAACAAUAAUUUGAAAUGCUUCUUUGCAAUAUUAUGGCGUUUCGGAACAGAUAAAAAUACUUCAUUUUCAGACAUUUGGUCAACAAAUACUUCUUGGACGUUUAUAUGCAAAGCAAUGCAUGUAACAUUUUCAUUACUUUGCAAGUGUGCUUAUCAGUAAAAGAAUUUUGUUUUAAAUUCUAGCCUUCGUUUAAAUGUAUUUUAGUUACCACAUUGGGAAGAAAAUAAAAUAUUACUAUGUACGGAAUGUA
Sequence (MODOMICS CODE ENCODING)	AUGGGAGGGCGGGCCGGGGCGAGGGCGGGGAAUUAGGCGGUGCGAGGCCAAUGGGAGGGCGGGCCGGGUCCUCUGGGCUGAGGCGGGGUGCCAGGCGGCACGAAGCCAGUGGGAGGGUGAGUUAGGGGCAGGGGCGGGGUCCCAAGCCAAUGGAAGGGUGAUACCGAGAGGGCGGGGCGCCAGGCGGCGAGAGAGCCAAUGGGAGGCCGAGCCGAGGACCGCGGGCGGUGGGCCUCCCCCCGAGAGGAGGGAGACCCGGAAGGCGGUGGGGGCGGGGAGUGGAGCUGACAACCUGUCAAAUCCACUUUGGGACGAACUAGGUCACGCGCUCCGCGGGUCGGGCACCCCCGCCCGCCAGGCACGGCCGCGGCUCCUUCCUCUUCCUGCCCGCGGUAGUGGGGGUGGGGCAGGCCUCGGGACACCUGCCUCCGCCGCCGGCCGCCGGCCGCCGUCCUCGCGCGGCUUCCCGGGCGGCUCUGCCCCGACCGUAGACUCCCGGCCCGCUCGCCGCGGCAGGAGCCGUGGUUCCGCGGACCUGGGCGCGCUCUCUCCCUGGCCACUGGGAGACCCCCCGCGGCCUCGCGGGGAAAACCUCGGG2000000006ACUGCCCCGCGCCCCCGGCCGUCUCUGCGUCGCUCCUUCUCGCCCGCGACCGUGG2000000006ACUCGUCCUCGCGAGCCUGGGUUGGCGGAAGCUGCGGGGGCCGGGGUCGCACUACUUGGCGCGGAAGGGCCGGCGGUGGGCGGAGGGAUCCCCGUCCGCGGGGUGAGCCGCUGGGCGGAGCCGGGAGGAGCCGCGAGGAUCCGCAGUGGGGAGCCGGGAGGAACCUGGCGCCGGCACCCACCCGCCGCGCCCACGCGUGCCGCGGUCGCUUGUUUCCCGCGGGAGCCCGGCCGCGCUCGGGGGGAGGCGCGCGCGCAGCUGGGGCUGCCUGGGUCUAGGAGCUCCGGAGCCACCGUUUUGUGCCCGUGGAGCCGCGGGGAAGGCGCACGCGCUCGGGUCUUCCCGGCGGGUCGUCCUGCACUUUCUCCCUCUCCGGUACGG2000000006ACCGCGGCGUUCUGUUUCCAGGCAAAGGAAAAUAAGUCAAAG2000000006ACUCAGAAGGCAGCCUGAAUCCAGGGCCUGGGAUGCAGGGUUUGCUGGAACGCCAGCCGGUGCGAUCGCGCCCCUGGGAUUCCGCUUAGCCCGCGCGUCCAUUUCCCUGCAUGGUGG2000000006ACUCAGUAAAGCCGGAUCUGUCCAACGCCUGCAGCGUGGAUGUGGAGGCGG2000000006ACUAAUCAACUAGUGCUCUGUUAUUAUUUCUACCCAUCCCUUUUCUCCAUGCUAAUUUGCUUAGAACU2000000009UUAACAUUGAAUGG2000000006ACAGCAAAUGUCAUGUUCUGUUUAAUUAUCACUCCUUGACCAUUAUGUUAAUUUCUUUCCCUAACAAGGUGACGCAUUGUUUUAAGUAACAAUGACCAACUCAUCUACUCUUCUUCCAAAUUGUGUAAAUUGAAGGGUAAAAUGUGGGAAAACGCUAAAUUUGAAUGCUAAAUUUGAACAUUUCACACAACAAUAAUUUGAAAUGCUUCUUUGCAAUAUUAUGGCGUUUCGGAACAGAUAAAAAUACUUCAUUUUCAGACAUUUGGUCAACAAAUACUUCUUGGACGUUUAUAUGCAAAGCAAUGCAUGUAACAUUUUCAUUACUUUGCAAGUGUGCUUAUCAGUAAAAGAAUUUUGUUUUAAAUUCUAGCCUUCGUUUAAAUGUAUUUUAGUUACCACAUUGGGAAGAAAAUAAAAUAUUACUAUGUACGGAAUGUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	599	654	1035	1077	1194	1245	1313	1327
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	7:152464384:+	7:152464439:+	7:152464820:+	7:152464862:+	7:152464979:+	7:152465030:+	7:152465098:+	7:152465112:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq Yfn77uLS5tv8	6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq Yfn77uLS5tv8	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn ArijeGVTwYBw BkoLW2CBToyL Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	Lny8GcCeVGc9 BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8