General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000426306
Gene ID:	ENSG00000160908
Gene Name:	ZNF394
Sequence (UNICHARACTER ENCODING)	CGAGAGAGUUGUAGGCGCAAAGCUGAGGAAAGGAGAGUGUGGAGAGGGGCCUGGUGUGGUGGGGCCCGGUGUUUGGGACCGGAGGGUGUUGACGGCUGAUGAGUUCCUUGGGUUUGCUCUUUCUUCACCUGAAAAGAAGACUCCAGGAAGGGCAGCACAUGCCGGAGAAAGAUGAAUUCCAGCUUGACCGCCCAGAGGCGCGGCAGUGACGCCGAGUUGGGЖCCCUGGGUGAUGGCUGCGAGGUCCAAGGACGCGGCGCCGUCCCAACGCGACGGЖCUUUUGCCCGUGAAAGUGGAGGAAGACUCACCCGGAAGUUGGGAGCCCAACUAUCCCGCGGCUUCGCCGGACCCCGAAACUUCUCGACUGCACUUUAGGCAGCUGCGUUACCAGGAGGUGGCUGGACCGGAAGAGGCGCUGAGCCGGCUCCGAGAЖCUCUGUCGUCGGUGGCUGAGACCCGAGCUGCUCUCCAAGGAGCAGAUCCUGGAGCUGCUGGUGCUGGAGCAGUUCCUCACCAUCCUGCCCGAGGAGCUUCAAGCCUGGGUGCGAGAGCACUGCCCAGAGAGCGGGGAGGAGGCGGUGGCCGUGGUGCGGGCUCUGCAGCGAGCGCUCGAUGGAACCUCAPCCCAGGUUUGGAAAGCAGAGUGGAGAACAAAGAGUUGAUUCCAAUGCAACAAAUUUUAGAAGAAGCGGAGCCACAGGGGCAACUACAAGAAGCGUUCCAGGGGAAGCGCCCCCUGUUUUCUAAGUGUGGCAGUACCCAUGAGGЖCAGGGUGGAAAAGCAGUCCGGAGACCCCUUGCCCCUGAAACUUGAAAAUUCUCCUGAAGCAGAAGGЖCUCAACAGCAUCUCAGAUGUCAAUAAGAAUGGUUCCAUAGAAGGGGAAGACUCUAAAAAUAAUGAAUUGCAGAЖCAGUGCCAGGUGUUCCAACCUUGUUCUAUGUCAGCACAUCCCGAAAGCAGAGAGGCCCACUGACAGUGAGGAACACGGGAACAAGUGCAAGCAAAGUUUCCACAUGGUGACGUGGCACGUGCUGAAACCUCACAAGUCUGACAGUGGAGACAGUUUCCAUCAUUCCAGCCUUUUUGAGACCCAGAGGCAGCUCCAUGAAGAAAGACCUUAUAAAUGUGGUAЖCUGUGGGAAGAGUUUCAAACAACGCUCUGACCUCUUUAGACACCAGAGAAUCCACACAGGUGAGAAACCCUAUGGCUGCCAAGAAUGUGGGAAAAGCUUCAGCCAGAGUGCUGCCCUGACCAAGCACCAGAGGЖCACACACAGGCGAGAAGCCGUACACCUGUCUGAAAUGUGGGGAGCGCUUCAGGCAGAAUUCACACCUAAAUCGUCAUCAAAGUACCCACAGUAGAGЖCAAЖCAUUUUAAAUGUGAGGAAUGCGGGGAAACCUGUCAUAUUUCCAACCUUUUUAGACAUCAGAGACUACAUAAAGGGGAAAGACCCUAUAAGUGUGAAGAAUGCGAGAAGAGCUUCAAACAGCGCUCUGACCUCUUUAAACACCACAGAAUCCACACUGGGGAGAAGCCCUAUGGAUGUUCCGUCUGUGGGAAACGCUUCAAUCAGAGUGCAACCCUCAUUAAACACCAGAGAAUUCACACUGGGGAAAAGCCUUACAAAUGUCUUGAAUGUGGGGAAAGAUUUAGACAAAGUACACACCUUAUCCGACACCAAAGAAUUCAUCAAAAUAAAGUGCUGUCGGCUGGGCGUGGUGGCUCACGCCUAUAAUCCCAGCACUUUGGGAGGCCAAGGCAGGCAGAUCAUUUGAGAUCAGGAGUUUGAAACCAGCCUGGCCAACAUGGUAAAAUCCUGUCUCUACUAAAAAUACAAAAAUGAGCCGGGCAUGGUGGUGCAUGCCUGUAAGCCCAGCUAUUCGGGAGGCUGAGGUAGGAGAAUCACUUGAACCCAGGAGGCGGAAGUUGCAGUGAGCUGAGAUCAUGCCACUGCACUCCAGCCUGGGCAACAGAGCGAGACUCCAUCUCAAAAAAGAAAUAAAGUGCUGUCAUUUUGAUAUG
Sequence (SHORT NAMES ENCODING)	CGAGAGAGUUGUAGGCGCAAAGCUGAGGAAAGGAGAGUGUGGAGAGGGGCCUGGUGUGGUGGGGCCCGGUGUUUGGGACCGGAGGGUGUUGACGGCUGAUGAGUUCCUUGGGUUUGCUCUUUCUUCACCUGAAAAGAAGACUCCAGGAAGGGCAGCACAUGCCGGAGAAAGAUGAAUUCCAGCUUGACCGCCCAGAGGCGCGGCAGUGACGCCGAGUUGGGm6ACCCUGGGUGAUGGCUGCGAGGUCCAAGGACGCGGCGCCGUCCCAACGCGACGGm6ACUUUUGCCCGUGAAAGUGGAGGAAGACUCACCCGGAAGUUGGGAGCCCAACUAUCCCGCGGCUUCGCCGGACCCCGAAACUUCUCGACUGCACUUUAGGCAGCUGCGUUACCAGGAGGUGGCUGGACCGGAAGAGGCGCUGAGCCGGCUCCGAGAm6ACUCUGUCGUCGGUGGCUGAGACCCGAGCUGCUCUCCAAGGAGCAGAUCCUGGAGCUGCUGGUGCUGGAGCAGUUCCUCACCAUCCUGCCCGAGGAGCUUCAAGCCUGGGUGCGAGAGCACUGCCCAGAGAGCGGGGAGGAGGCGGUGGCCGUGGUGCGGGCUCUGCAGCGAGCGCUCGAUGGAACCUCAYCCCAGGUUUGGAAAGCAGAGUGGAGAACAAAGAGUUGAUUCCAAUGCAACAAAUUUUAGAAGAAGCGGAGCCACAGGGGCAACUACAAGAAGCGUUCCAGGGGAAGCGCCCCCUGUUUUCUAAGUGUGGCAGUACCCAUGAGGm6ACAGGGUGGAAAAGCAGUCCGGAGACCCCUUGCCCCUGAAACUUGAAAAUUCUCCUGAAGCAGAAGGm6ACUCAACAGCAUCUCAGAUGUCAAUAAGAAUGGUUCCAUAGAAGGGGAAGACUCUAAAAAUAAUGAAUUGCAGAm6ACAGUGCCAGGUGUUCCAACCUUGUUCUAUGUCAGCACAUCCCGAAAGCAGAGAGGCCCACUGACAGUGAGGAACACGGGAACAAGUGCAAGCAAAGUUUCCACAUGGUGACGUGGCACGUGCUGAAACCUCACAAGUCUGACAGUGGAGACAGUUUCCAUCAUUCCAGCCUUUUUGAGACCCAGAGGCAGCUCCAUGAAGAAAGACCUUAUAAAUGUGGUAm6ACUGUGGGAAGAGUUUCAAACAACGCUCUGACCUCUUUAGACACCAGAGAAUCCACACAGGUGAGAAACCCUAUGGCUGCCAAGAAUGUGGGAAAAGCUUCAGCCAGAGUGCUGCCCUGACCAAGCACCAGAGGm6ACACACACAGGCGAGAAGCCGUACACCUGUCUGAAAUGUGGGGAGCGCUUCAGGCAGAAUUCACACCUAAAUCGUCAUCAAAGUACCCACAGUAGAGm6ACAAm6ACAUUUUAAAUGUGAGGAAUGCGGGGAAACCUGUCAUAUUUCCAACCUUUUUAGACAUCAGAGACUACAUAAAGGGGAAAGACCCUAUAAGUGUGAAGAAUGCGAGAAGAGCUUCAAACAGCGCUCUGACCUCUUUAAACACCACAGAAUCCACACUGGGGAGAAGCCCUAUGGAUGUUCCGUCUGUGGGAAACGCUUCAAUCAGAGUGCAACCCUCAUUAAACACCAGAGAAUUCACACUGGGGAAAAGCCUUACAAAUGUCUUGAAUGUGGGGAAAGAUUUAGACAAAGUACACACCUUAUCCGACACCAAAGAAUUCAUCAAAAUAAAGUGCUGUCGGCUGGGCGUGGUGGCUCACGCCUAUAAUCCCAGCACUUUGGGAGGCCAAGGCAGGCAGAUCAUUUGAGAUCAGGAGUUUGAAACCAGCCUGGCCAACAUGGUAAAAUCCUGUCUCUACUAAAAAUACAAAAAUGAGCCGGGCAUGGUGGUGCAUGCCUGUAAGCCCAGCUAUUCGGGAGGCUGAGGUAGGAGAAUCACUUGAACCCAGGAGGCGGAAGUUGCAGUGAGCUGAGAUCAUGCCACUGCACUCCAGCCUGGGCAACAGAGCGAGACUCCAUCUCAAAAAAGAAAUAAAGUGCUGUCAUUUUGAUAUG
Sequence (MODOMICS CODE ENCODING)	CGAGAGAGUUGUAGGCGCAAAGCUGAGGAAAGGAGAGUGUGGAGAGGGGCCUGGUGUGGUGGGGCCCGGUGUUUGGGACCGGAGGGUGUUGACGGCUGAUGAGUUCCUUGGGUUUGCUCUUUCUUCACCUGAAAAGAAGACUCCAGGAAGGGCAGCACAUGCCGGAGAAAGAUGAAUUCCAGCUUGACCGCCCAGAGGCGCGGCAGUGACGCCGAGUUGGG2000000006ACCCUGGGUGAUGGCUGCGAGGUCCAAGGACGCGGCGCCGUCCCAACGCGACGG2000000006ACUUUUGCCCGUGAAAGUGGAGGAAGACUCACCCGGAAGUUGGGAGCCCAACUAUCCCGCGGCUUCGCCGGACCCCGAAACUUCUCGACUGCACUUUAGGCAGCUGCGUUACCAGGAGGUGGCUGGACCGGAAGAGGCGCUGAGCCGGCUCCGAGA2000000006ACUCUGUCGUCGGUGGCUGAGACCCGAGCUGCUCUCCAAGGAGCAGAUCCUGGAGCUGCUGGUGCUGGAGCAGUUCCUCACCAUCCUGCCCGAGGAGCUUCAAGCCUGGGUGCGAGAGCACUGCCCAGAGAGCGGGGAGGAGGCGGUGGCCGUGGUGCGGGCUCUGCAGCGAGCGCUCGAUGGAACCUCA2000000009UCCCAGGUUUGGAAAGCAGAGUGGAGAACAAAGAGUUGAUUCCAAUGCAACAAAUUUUAGAAGAAGCGGAGCCACAGGGGCAACUACAAGAAGCGUUCCAGGGGAAGCGCCCCCUGUUUUCUAAGUGUGGCAGUACCCAUGAGG2000000006ACAGGGUGGAAAAGCAGUCCGGAGACCCCUUGCCCCUGAAACUUGAAAAUUCUCCUGAAGCAGAAGG2000000006ACUCAACAGCAUCUCAGAUGUCAAUAAGAAUGGUUCCAUAGAAGGGGAAGACUCUAAAAAUAAUGAAUUGCAGA2000000006ACAGUGCCAGGUGUUCCAACCUUGUUCUAUGUCAGCACAUCCCGAAAGCAGAGAGGCCCACUGACAGUGAGGAACACGGGAACAAGUGCAAGCAAAGUUUCCACAUGGUGACGUGGCACGUGCUGAAACCUCACAAGUCUGACAGUGGAGACAGUUUCCAUCAUUCCAGCCUUUUUGAGACCCAGAGGCAGCUCCAUGAAGAAAGACCUUAUAAAUGUGGUA2000000006ACUGUGGGAAGAGUUUCAAACAACGCUCUGACCUCUUUAGACACCAGAGAAUCCACACAGGUGAGAAACCCUAUGGCUGCCAAGAAUGUGGGAAAAGCUUCAGCCAGAGUGCUGCCCUGACCAAGCACCAGAGG2000000006ACACACACAGGCGAGAAGCCGUACACCUGUCUGAAAUGUGGGGAGCGCUUCAGGCAGAAUUCACACCUAAAUCGUCAUCAAAGUACCCACAGUAGAG2000000006ACAA2000000006ACAUUUUAAAUGUGAGGAAUGCGGGGAAACCUGUCAUAUUUCCAACCUUUUUAGACAUCAGAGACUACAUAAAGGGGAAAGACCCUAUAAGUGUGAAGAAUGCGAGAAGAGCUUCAAACAGCGCUCUGACCUCUUUAAACACCACAGAAUCCACACUGGGGAGAAGCCCUAUGGAUGUUCCGUCUGUGGGAAACGCUUCAAUCAGAGUGCAACCCUCAUUAAACACCAGAGAAUUCACACUGGGGAAAAGCCUUACAAAUGUCUUGAAUGUGGGGAAAGAUUUAGACAAAGUACACACCUUAUCCGACACCAAAGAAUUCAUCAAAAUAAAGUGCUGUCGGCUGGGCGUGGUGGCUCACGCCUAUAAUCCCAGCACUUUGGGAGGCCAAGGCAGGCAGAUCAUUUGAGAUCAGGAGUUUGAAACCAGCCUGGCCAACAUGGUAAAAUCCUGUCUCUACUAAAAAUACAAAAAUGAGCCGGGCAUGGUGGUGCAUGCCUGUAAGCCCAGCUAUUCGGGAGGCUGAGGUAGGAGAAUCACUUGAACCCAGGAGGCGGAAGUUGCAGUGAGCUGAGAUCAUGCCACUGCACUCCAGCCUGGGCAACAGAGCGAGACUCCAUCUCAAAAAAGAAAUAAAGUGCUGUCAUUUUGAUAUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	222	276	432	622	766	833	907	1129	1263	1360	1364
Modification Positions	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	7:99500043:-	7:99499989:-	7:99499833:-	7:99499643:-	7:99494493:-	7:99494426:-	7:99494352:-	7:99494130:-	7:99493996:-	7:99493899:-	7:99493895:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC WiQcrNTGZHPT Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq	6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq	VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 Lny8GcCeVGc9 BtsJQJ3DteUq	WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq