General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000492979
Gene ID:	ENSG00000146700
Gene Name:	SSC4D
Sequence (UNICHARACTER ENCODING)	CGAGGCUCGCCUGAGCGACUGCUUCCACCUGGGCUGGGGCCAGCACAACUGCGGCCACCACGAGGACGCGGGAGCGCUCUGCGCAGGUGAGGCUGACAGCGAAGGCCCAGAGGAGCUGGGACUGCAAGUCCAGCAGGAUGGUUCUGAGACCACGCGGGUGCCCACUCCUCGGCCCAGGGACGGGCAUCUACGUCUGGUCAAUGGAGCCCACCGAUGCGAGGGACGUGUAGAGCUCUACCUAGGGCAACGGUGGGGCACUGUCUGUGAUGAUGCUUGGGЖCCUGCGGGCAGCCGGUGUCCUGUGCCGCCAGCUGGGCUGUGGCCAGGCCCUCGCAGCCCCUGGCGAGGCUCACUUUGGCCCAGGCCGAGGCCCCAUUCUCCUGGЖCAAUGUCAAGUGCCGUGGGGAAGAAAGUGCUCUGCUGCUCUGCUCUCAUAUCCGCUGGGAUGCCCACAACUGUGACCACAGCGAGGAUGCCAGUGUCCUGUGCCAGCCUUCAUGACCCAGCCCGCUCUGCAGACCACCUCUUCUUCUGGGAGCUGUGACCUCCCUUCCUCCUCCAGGAAGCCCUCCUCUUGUGAUGACUACAGUUCACUUUGCCCCUCCUUCCCUUGCCUGGGAGAGAGCCUACCUAGЖCAGUGCAGUCCUGCUUGGGGGAGCCUGGCUGUACCCCCGUCCACUUACUGCGUGACCUCAGCCUGUCAUCGЖCUGUUGUGAGCCCAAUUCAGUGAAAGCUCCUGUGGUUUUGCUCAGCCAAAACCAAAACGAGGGGAAGAGGAUGAUUCCUAACUCUUCUGUUUGGUGGGGCUCUUUUUAUAGCACCAGЖCUCUGCCUUCCUUGACCUAGAUCCAGGAGGCUCAGGGGCUCUUUAAAUGGGGUAUCUCCUCUUCCCCCAACCCAUCUUGGGAUCCCCAAGAAGAGGGAAGGCAGGAGGGGCCUACAGCUCCUACCUUGGGCCCUCAGGGGCUGCAGAGGAACCUGGGUCCCUGUCCUGCCCUGCUCCGCGAGGGCCUGGЖCUAACUCAGAUGGUGCUCGGCUGGACAAGGGGACUGGGGGAGGGGCCAAAGCAGGGACAGUGGCCCCUCCCUGCAGCUGGAACCAGCAUCUCUGAUUUAUGCCGUCUCCACCACAGAGCCUCCACUUUGCAGGAGUGAAGAACCCUGGGGGCCUGUAGCCACCAGUUCAUAGGUGCCAAGUCAAUAAAGCAUUGUCCCCCGUCUCUUAUAA
Sequence (SHORT NAMES ENCODING)	CGAGGCUCGCCUGAGCGACUGCUUCCACCUGGGCUGGGGCCAGCACAACUGCGGCCACCACGAGGACGCGGGAGCGCUCUGCGCAGGUGAGGCUGACAGCGAAGGCCCAGAGGAGCUGGGACUGCAAGUCCAGCAGGAUGGUUCUGAGACCACGCGGGUGCCCACUCCUCGGCCCAGGGACGGGCAUCUACGUCUGGUCAAUGGAGCCCACCGAUGCGAGGGACGUGUAGAGCUCUACCUAGGGCAACGGUGGGGCACUGUCUGUGAUGAUGCUUGGGm6ACCUGCGGGCAGCCGGUGUCCUGUGCCGCCAGCUGGGCUGUGGCCAGGCCCUCGCAGCCCCUGGCGAGGCUCACUUUGGCCCAGGCCGAGGCCCCAUUCUCCUGGm6ACAAUGUCAAGUGCCGUGGGGAAGAAAGUGCUCUGCUGCUCUGCUCUCAUAUCCGCUGGGAUGCCCACAACUGUGACCACAGCGAGGAUGCCAGUGUCCUGUGCCAGCCUUCAUGACCCAGCCCGCUCUGCAGACCACCUCUUCUUCUGGGAGCUGUGACCUCCCUUCCUCCUCCAGGAAGCCCUCCUCUUGUGAUGACUACAGUUCACUUUGCCCCUCCUUCCCUUGCCUGGGAGAGAGCCUACCUAGm6ACAGUGCAGUCCUGCUUGGGGGAGCCUGGCUGUACCCCCGUCCACUUACUGCGUGACCUCAGCCUGUCAUCGm6ACUGUUGUGAGCCCAAUUCAGUGAAAGCUCCUGUGGUUUUGCUCAGCCAAAACCAAAACGAGGGGAAGAGGAUGAUUCCUAACUCUUCUGUUUGGUGGGGCUCUUUUUAUAGCACCAGm6ACUCUGCCUUCCUUGACCUAGAUCCAGGAGGCUCAGGGGCUCUUUAAAUGGGGUAUCUCCUCUUCCCCCAACCCAUCUUGGGAUCCCCAAGAAGAGGGAAGGCAGGAGGGGCCUACAGCUCCUACCUUGGGCCCUCAGGGGCUGCAGAGGAACCUGGGUCCCUGUCCUGCCCUGCUCCGCGAGGGCCUGGm6ACUAACUCAGAUGGUGCUCGGCUGGACAAGGGGACUGGGGGAGGGGCCAAAGCAGGGACAGUGGCCCCUCCCUGCAGCUGGAACCAGCAUCUCUGAUUUAUGCCGUCUCCACCACAGAGCCUCCACUUUGCAGGAGUGAAGAACCCUGGGGGCCUGUAGCCACCAGUUCAUAGGUGCCAAGUCAAUAAAGCAUUGUCCCCCGUCUCUUAUAA
Sequence (MODOMICS CODE ENCODING)	CGAGGCUCGCCUGAGCGACUGCUUCCACCUGGGCUGGGGCCAGCACAACUGCGGCCACCACGAGGACGCGGGAGCGCUCUGCGCAGGUGAGGCUGACAGCGAAGGCCCAGAGGAGCUGGGACUGCAAGUCCAGCAGGAUGGUUCUGAGACCACGCGGGUGCCCACUCCUCGGCCCAGGGACGGGCAUCUACGUCUGGUCAAUGGAGCCCACCGAUGCGAGGGACGUGUAGAGCUCUACCUAGGGCAACGGUGGGGCACUGUCUGUGAUGAUGCUUGGG2000000006ACCUGCGGGCAGCCGGUGUCCUGUGCCGCCAGCUGGGCUGUGGCCAGGCCCUCGCAGCCCCUGGCGAGGCUCACUUUGGCCCAGGCCGAGGCCCCAUUCUCCUGG2000000006ACAAUGUCAAGUGCCGUGGGGAAGAAAGUGCUCUGCUGCUCUGCUCUCAUAUCCGCUGGGAUGCCCACAACUGUGACCACAGCGAGGAUGCCAGUGUCCUGUGCCAGCCUUCAUGACCCAGCCCGCUCUGCAGACCACCUCUUCUUCUGGGAGCUGUGACCUCCCUUCCUCCUCCAGGAAGCCCUCCUCUUGUGAUGACUACAGUUCACUUUGCCCCUCCUUCCCUUGCCUGGGAGAGAGCCUACCUAG2000000006ACAGUGCAGUCCUGCUUGGGGGAGCCUGGCUGUACCCCCGUCCACUUACUGCGUGACCUCAGCCUGUCAUCG2000000006ACUGUUGUGAGCCCAAUUCAGUGAAAGCUCCUGUGGUUUUGCUCAGCCAAAACCAAAACGAGGGGAAGAGGAUGAUUCCUAACUCUUCUGUUUGGUGGGGCUCUUUUUAUAGCACCAG2000000006ACUCUGCCUUCCUUGACCUAGAUCCAGGAGGCUCAGGGGCUCUUUAAAUGGGGUAUCUCCUCUUCCCCCAACCCAUCUUGGGAUCCCCAAGAAGAGGGAAGGCAGGAGGGGCCUACAGCUCCUACCUUGGGCCCUCAGGGGCUGCAGAGGAACCUGGGUCCCUGUCCUGCCCUGCUCCGCGAGGGCCUGG2000000006ACUAACUCAGAUGGUGCUCGGCUGGACAAGGGGACUGGGGGAGGGGCCAAAGCAGGGACAGUGGCCCCUCCCUGCAGCUGGAACCAGCAUCUCUGAUUUAUGCCGUCUCCACCACAGAGCCUCCACUUUGCAGGAGUGAAGAACCCUGGGGGCCUGUAGCCACCAGUUCAUAGGUGCCAAGUCAAUAAAGCAUUGUCCCCCGUCUCUUAUAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	279	384	633	705	823	1013
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	7:76390279:-	7:76390174:-	7:76389925:-	7:76389853:-	7:76389735:-	7:76389545:-
Level of Experimental Evidence	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6AyXsheySjfx Ap2q43bQLNek msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx Ap2q43bQLNek msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn nfCHyrYzE6fB Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx aHkqKEJkRYyb Ap2q43bQLNek msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx Ap2q43bQLNek msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb Ap2q43bQLNek msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn nfCHyrYzE6fB Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx Ap2q43bQLNek msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL Yfn77uLS5tv8