General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000255977
Gene ID:	ENSG00000133606
Gene Name:	MKRN1
Sequence (UNICHARACTER ENCODING)	GAGAGCGCUCAGAUACGCGACGCGUAGCAGGCGGGGACCGAACGGGUGCCUCAGUGUCCUUCCCCUCCCCUCGCCUGGCCUCGCCGUCCUCUCCCCGCAGCCGGACCGGAACUAUGUGAUCCCGGAAGUUCCGGGGCCUUUGCUGUGUGGGAUAAACAGUAAUGGCGGAGGCUGCAACUCCCGGAACAACAGCCACAACAUCAGGAGCAGGAGCGGCAGCGGCGACGGCGGCAGCAGCCUCCCCCACCCCGAUCCCCACAGUCACCGCCCCGUCCCUGGGGGCGGGCGGAGGGGGCGGCGGCAGCGACGGCAGCGGCGGCGGCUGGACUAAЖCAGGUCACCUGCAGGUAUUUUAUGCAUGGGGUUUGUAAGGAAGGAGACAACUGUCGCUACUCGCAUGACCUCUCUGACAGUCCGUAUAGUGUAGUGUGCAAGUAUUUUCAGCGAGGGUACUGUAUUUAUGGAGACCGCUGCAGAUAUGAACAUAGCAAACCAUUGAAACAGGAAGAAGCAACUGCUACAGAGCUAЖCUACAAAGUCAUCCCUUGCUGCUUCCUCAAGUCUCUCAUCGAUAGUUGGACCACUUGUUGAAAUGAAUACAGGCGAAGCUGAGUCAAGAAAUUCAAACUUUGCAACUGUAGGAGCAG#UPCAGAGGACUGGGUGAAUGCUAUUGAGUUUGUUCCUGGGCAACCCUACUGUGGCCGUACUGCGCCUUCCUGCACUGAAGCACCCCUGCAGGGCUCAGUGACCAAGGAAGAAUCAGAGAAAGAGCAAЖCCGCCGUGGAGACAAAGAAGCAGCUGUGCCCCUAUGCUGCAGUGGGAGAGUGCCGAUACGGGGAGAACUGUGUGUAUCUCCACGGAGAUUCUUGUGACAUGUGUGGGCUGCAGGUCCUGCAUCCAAUGGAUGCUGCCCAGAGAUCGCAGCAUAUCAAAUCGUGCAUUGAGGCCCAUGAGAAGGЖCAUGGAGCUCUCAUUUGCCGUGCAGCGCAGCAAGGЖCAUGGUGUGUGGGAUCUGCAUGGAGGUGGUCUAUGAGAAAGCCAACCCCAGUGAGCGCCGCUUCGGGAUCCUCUCCAACUGCAACCACACCUACUGUCUCAAGUGCAUUCGCAAGUGGAGGAGUGCUAAGCAAUUUGAGAGCAAGAUCAUAAAGUCCUGCCCAGAAUGCCGGAUCACAUCUAACUUUGUCAUUCCAAGUGAGUACUGGGUGGAGGAGAAAGAAGAGAAGCAGAAACUCAUUCUGAAAUACAAGGAGGCAAUGAGCAACAAGGCGUGCAGGUAUUUUGAUGAAGGACGUGGGAGCUGCCCAUUUGGAGGGAACUGUUUUUACAAGCAUGCGUACCCUGAUGGCCGUAGAGAGGAGCCACAGAGACAGAAAGUGGGAACAUCAAGCAGAUACCGGGCCCAACGAAGGAЖCCACUUCUGGGAACUCAUUGAGGAAAGAGAGAЖCAGCAACCCCUUUGACAACGAUGAAGAAGAGGUUGUCACCUUUGAGCUGGGCGAGAUGUUGCUUAUGCUUUUGGCUGCAGGUGGGGЖCGACGAЖCUAЖCAGЖCUCUGAAGAUGAGUGGGЖCUUGUUUCAUGAUGAGCUGGAAGAUUUUUAUGACUUGGAUCUAUAGCAACCUUGCGUGGCGUGUGAЖCUGGUCUGCUGACCUCAGACAGCAGCUGUCCCCUGUGGUGGUGUGGCAGUGCCUGUGUUCUCUCCUAGGCAGGCCUCUCAACUCCAGGUGCUGUCCUAAGAAUUUUUACCCAGGGCCUGUCUUCUCAACCCCUCACCUUUCCCUGAGGAGUGUGUUGUUUUCCCUGUUGЖAAAAAGUUACAAAAAUAAAUCUUAAAGUUAGUUUUUUGUAACACGAAUUUAACUGUCAGЖCAGUUAGUGUAGGUGUGUUGCGUCAUCUGUUUUCAACCЖGAUUGCAUUUAUGGЖCUUUUCACACACUCAUUUUGAGGACCCCAGGUUCAAAAGUAAAAGCAGUGGCCCUGCUUUGGGGUCCAAGAAUAGGAGUGAUGGGUGAAGGGACCUAAGCUGGCCAAUAGCCCUCUGCCCCAGЖCAUGGGAUGUGGAUCCUUGAGGUUUCUGGUGAAAUCUGCACAUCUGUGUUUUUAUAUCUGUUCCCUACCCUGUAAUCCCUACCACGUGCACUUGUUCUGUGGUUUUGGUCUCUUGUUUAAUUGCACACAAGUAAUACUACUGGGUAЖCCAGAAUCAGGUGUGAAUGUGUUGAGAUUUUUUACUGUUUUGCAUGAUAGGAAAAUUGAGAAAGAAUACGUAUAAAAGAUAGAGAGGCAUAЖCAUCAAUGCAGAGUUGGAAGUUGGCUCCCAAGGGCUGACAUGGUGUGAGUGUGUGGGUGUGUGAUAAGCUUCUCAPCCCUGCAUAGAUGCAGUAUUCUUAGCCUUAGUAGAAAAACCUGGUUUAGUGGUUUAAGCCUUGUGUGGCAGAUAGAUCUUAAAGGGCAAAGCAGUAUAUUGGUAGUUGUCAAUAUAGCAGUGCUAGCUCUGUCUAUAUAAAUAGAGAAAUGGGGUUAGCCAUAGAGGUUAAAACUACCUGGUUAUCCCAUAUAAUAACACAAACUGGGUCUUGGAUACACAGUUGUAUUUAAUGUUUUACGAUCUAGCCUUUCCAGUACAGGCACUUUCUGAGAAACCUUUGUCCUCACUUGAGGCAUUUUGUUGUCGGGUUUUUGUGUUUGUUUUUGUGGGUAUUUGCCUCAUUCCACCCCUGAGCUUUCAGGUAGACAGACGUGAUUCAAAACUCUGUUCUAAGGUGUUUAUUGUAGUGGAGUAAUGGGUUUGCAGUGAUAAGUCAUACUUUUCCACCGAAAGGGAGGGCUUGGGAAUCCCUGAGAUUAGCUAAAGUUAAGUUGUUGGAAGAAUUCCUUGAUUGGAAAUUGUACCUUUGUGUUUUGUUGCUCUGUUUCCUGAAAAUAACUCGGGGAUGCUCCUGGUUUGUCCAUCUACUGCUUUGAUUCCUUGGAUCCCACCCAUUCUUUCACUPUAAGAAAAAACAAAUAAUUGUUGCAGAGGUCUCUGUAUUUUGCAGCUGCCCUUUUGUAAGAAGCACUUUUCCCAAAUAAAACAAUUAAAAAAAAAGUUGGCUGUUCUGUGUAA
Sequence (SHORT NAMES ENCODING)	GAGAGCGCUCAGAUACGCGACGCGUAGCAGGCGGGGACCGAACGGGUGCCUCAGUGUCCUUCCCCUCCCCUCGCCUGGCCUCGCCGUCCUCUCCCCGCAGCCGGACCGGAACUAUGUGAUCCCGGAAGUUCCGGGGCCUUUGCUGUGUGGGAUAAACAGUAAUGGCGGAGGCUGCAACUCCCGGAACAACAGCCACAACAUCAGGAGCAGGAGCGGCAGCGGCGACGGCGGCAGCAGCCUCCCCCACCCCGAUCCCCACAGUCACCGCCCCGUCCCUGGGGGCGGGCGGAGGGGGCGGCGGCAGCGACGGCAGCGGCGGCGGCUGGACUAAm6ACAGGUCACCUGCAGGUAUUUUAUGCAUGGGGUUUGUAAGGAAGGAGACAACUGUCGCUACUCGCAUGACCUCUCUGACAGUCCGUAUAGUGUAGUGUGCAAGUAUUUUCAGCGAGGGUACUGUAUUUAUGGAGACCGCUGCAGAUAUGAACAUAGCAAACCAUUGAAACAGGAAGAAGCAACUGCUACAGAGCUAm6ACUACAAAGUCAUCCCUUGCUGCUUCCUCAAGUCUCUCAUCGAUAGUUGGACCACUUGUUGAAAUGAAUACAGGCGAAGCUGAGUCAAGAAAUUCAAACUUUGCAACUGUAGGAGCAGGmUYCAGAGGACUGGGUGAAUGCUAUUGAGUUUGUUCCUGGGCAACCCUACUGUGGCCGUACUGCGCCUUCCUGCACUGAAGCACCCCUGCAGGGCUCAGUGACCAAGGAAGAAUCAGAGAAAGAGCAAm6ACCGCCGUGGAGACAAAGAAGCAGCUGUGCCCCUAUGCUGCAGUGGGAGAGUGCCGAUACGGGGAGAACUGUGUGUAUCUCCACGGAGAUUCUUGUGACAUGUGUGGGCUGCAGGUCCUGCAUCCAAUGGAUGCUGCCCAGAGAUCGCAGCAUAUCAAAUCGUGCAUUGAGGCCCAUGAGAAGGm6ACAUGGAGCUCUCAUUUGCCGUGCAGCGCAGCAAGGm6ACAUGGUGUGUGGGAUCUGCAUGGAGGUGGUCUAUGAGAAAGCCAACCCCAGUGAGCGCCGCUUCGGGAUCCUCUCCAACUGCAACCACACCUACUGUCUCAAGUGCAUUCGCAAGUGGAGGAGUGCUAAGCAAUUUGAGAGCAAGAUCAUAAAGUCCUGCCCAGAAUGCCGGAUCACAUCUAACUUUGUCAUUCCAAGUGAGUACUGGGUGGAGGAGAAAGAAGAGAAGCAGAAACUCAUUCUGAAAUACAAGGAGGCAAUGAGCAACAAGGCGUGCAGGUAUUUUGAUGAAGGACGUGGGAGCUGCCCAUUUGGAGGGAACUGUUUUUACAAGCAUGCGUACCCUGAUGGCCGUAGAGAGGAGCCACAGAGACAGAAAGUGGGAACAUCAAGCAGAUACCGGGCCCAACGAAGGAm6ACCACUUCUGGGAACUCAUUGAGGAAAGAGAGAm6ACAGCAACCCCUUUGACAACGAUGAAGAAGAGGUUGUCACCUUUGAGCUGGGCGAGAUGUUGCUUAUGCUUUUGGCUGCAGGUGGGGm6ACGACGAm6ACUAm6ACAGm6ACUCUGAAGAUGAGUGGGm6ACUUGUUUCAUGAUGAGCUGGAAGAUUUUUAUGACUUGGAUCUAUAGCAACCUUGCGUGGCGUGUGAm6ACUGGUCUGCUGACCUCAGACAGCAGCUGUCCCCUGUGGUGGUGUGGCAGUGCCUGUGUUCUCUCCUAGGCAGGCCUCUCAACUCCAGGUGCUGUCCUAAGAAUUUUUACCCAGGGCCUGUCUUCUCAACCCCUCACCUUUCCCUGAGGAGUGUGUUGUUUUCCCUGUUGm6AAAAAAGUUACAAAAAUAAAUCUUAAAGUUAGUUUUUUGUAACACGAAUUUAACUGUCAGm6ACAGUUAGUGUAGGUGUGUUGCGUCAUCUGUUUUCAACCm6AGAUUGCAUUUAUGGm6ACUUUUCACACACUCAUUUUGAGGACCCCAGGUUCAAAAGUAAAAGCAGUGGCCCUGCUUUGGGGUCCAAGAAUAGGAGUGAUGGGUGAAGGGACCUAAGCUGGCCAAUAGCCCUCUGCCCCAGm6ACAUGGGAUGUGGAUCCUUGAGGUUUCUGGUGAAAUCUGCACAUCUGUGUUUUUAUAUCUGUUCCCUACCCUGUAAUCCCUACCACGUGCACUUGUUCUGUGGUUUUGGUCUCUUGUUUAAUUGCACACAAGUAAUACUACUGGGUAm6ACCAGAAUCAGGUGUGAAUGUGUUGAGAUUUUUUACUGUUUUGCAUGAUAGGAAAAUUGAGAAAGAAUACGUAUAAAAGAUAGAGAGGCAUAm6ACAUCAAUGCAGAGUUGGAAGUUGGCUCCCAAGGGCUGACAUGGUGUGAGUGUGUGGGUGUGUGAUAAGCUUCUCAYCCCUGCAUAGAUGCAGUAUUCUUAGCCUUAGUAGAAAAACCUGGUUUAGUGGUUUAAGCCUUGUGUGGCAGAUAGAUCUUAAAGGGCAAAGCAGUAUAUUGGUAGUUGUCAAUAUAGCAGUGCUAGCUCUGUCUAUAUAAAUAGAGAAAUGGGGUUAGCCAUAGAGGUUAAAACUACCUGGUUAUCCCAUAUAAUAACACAAACUGGGUCUUGGAUACACAGUUGUAUUUAAUGUUUUACGAUCUAGCCUUUCCAGUACAGGCACUUUCUGAGAAACCUUUGUCCUCACUUGAGGCAUUUUGUUGUCGGGUUUUUGUGUUUGUUUUUGUGGGUAUUUGCCUCAUUCCACCCCUGAGCUUUCAGGUAGACAGACGUGAUUCAAAACUCUGUUCUAAGGUGUUUAUUGUAGUGGAGUAAUGGGUUUGCAGUGAUAAGUCAUACUUUUCCACCGAAAGGGAGGGCUUGGGAAUCCCUGAGAUUAGCUAAAGUUAAGUUGUUGGAAGAAUUCCUUGAUUGGAAAUUGUACCUUUGUGUUUUGUUGCUCUGUUUCCUGAAAAUAACUCGGGGAUGCUCCUGGUUUGUCCAUCUACUGCUUUGAUUCCUUGGAUCCCACCCAUUCUUUCACUYUAAGAAAAAACAAAUAAUUGUUGCAGAGGUCUCUGUAUUUUGCAGCUGCCCUUUUGUAAGAAGCACUUUUCCCAAAUAAAACAAUUAAAAAAAAAGUUGGCUGUUCUGUGUAA
Sequence (MODOMICS CODE ENCODING)	GAGAGCGCUCAGAUACGCGACGCGUAGCAGGCGGGGACCGAACGGGUGCCUCAGUGUCCUUCCCCUCCCCUCGCCUGGCCUCGCCGUCCUCUCCCCGCAGCCGGACCGGAACUAUGUGAUCCCGGAAGUUCCGGGGCCUUUGCUGUGUGGGAUAAACAGUAAUGGCGGAGGCUGCAACUCCCGGAACAACAGCCACAACAUCAGGAGCAGGAGCGGCAGCGGCGACGGCGGCAGCAGCCUCCCCCACCCCGAUCCCCACAGUCACCGCCCCGUCCCUGGGGGCGGGCGGAGGGGGCGGCGGCAGCGACGGCAGCGGCGGCGGCUGGACUAA2000000006ACAGGUCACCUGCAGGUAUUUUAUGCAUGGGGUUUGUAAGGAAGGAGACAACUGUCGCUACUCGCAUGACCUCUCUGACAGUCCGUAUAGUGUAGUGUGCAAGUAUUUUCAGCGAGGGUACUGUAUUUAUGGAGACCGCUGCAGAUAUGAACAUAGCAAACCAUUGAAACAGGAAGAAGCAACUGCUACAGAGCUA2000000006ACUACAAAGUCAUCCCUUGCUGCUUCCUCAAGUCUCUCAUCGAUAGUUGGACCACUUGUUGAAAUGAAUACAGGCGAAGCUGAGUCAAGAAAUUCAAACUUUGCAACUGUAGGAGCAG2000000090GU2000000009UCAGAGGACUGGGUGAAUGCUAUUGAGUUUGUUCCUGGGCAACCCUACUGUGGCCGUACUGCGCCUUCCUGCACUGAAGCACCCCUGCAGGGCUCAGUGACCAAGGAAGAAUCAGAGAAAGAGCAA2000000006ACCGCCGUGGAGACAAAGAAGCAGCUGUGCCCCUAUGCUGCAGUGGGAGAGUGCCGAUACGGGGAGAACUGUGUGUAUCUCCACGGAGAUUCUUGUGACAUGUGUGGGCUGCAGGUCCUGCAUCCAAUGGAUGCUGCCCAGAGAUCGCAGCAUAUCAAAUCGUGCAUUGAGGCCCAUGAGAAGG2000000006ACAUGGAGCUCUCAUUUGCCGUGCAGCGCAGCAAGG2000000006ACAUGGUGUGUGGGAUCUGCAUGGAGGUGGUCUAUGAGAAAGCCAACCCCAGUGAGCGCCGCUUCGGGAUCCUCUCCAACUGCAACCACACCUACUGUCUCAAGUGCAUUCGCAAGUGGAGGAGUGCUAAGCAAUUUGAGAGCAAGAUCAUAAAGUCCUGCCCAGAAUGCCGGAUCACAUCUAACUUUGUCAUUCCAAGUGAGUACUGGGUGGAGGAGAAAGAAGAGAAGCAGAAACUCAUUCUGAAAUACAAGGAGGCAAUGAGCAACAAGGCGUGCAGGUAUUUUGAUGAAGGACGUGGGAGCUGCCCAUUUGGAGGGAACUGUUUUUACAAGCAUGCGUACCCUGAUGGCCGUAGAGAGGAGCCACAGAGACAGAAAGUGGGAACAUCAAGCAGAUACCGGGCCCAACGAAGGA2000000006ACCACUUCUGGGAACUCAUUGAGGAAAGAGAGA2000000006ACAGCAACCCCUUUGACAACGAUGAAGAAGAGGUUGUCACCUUUGAGCUGGGCGAGAUGUUGCUUAUGCUUUUGGCUGCAGGUGGGG2000000006ACGACGA2000000006ACUA2000000006ACAG2000000006ACUCUGAAGAUGAGUGGG2000000006ACUUGUUUCAUGAUGAGCUGGAAGAUUUUUAUGACUUGGAUCUAUAGCAACCUUGCGUGGCGUGUGA2000000006ACUGGUCUGCUGACCUCAGACAGCAGCUGUCCCCUGUGGUGGUGUGGCAGUGCCUGUGUUCUCUCCUAGGCAGGCCUCUCAACUCCAGGUGCUGUCCUAAGAAUUUUUACCCAGGGCCUGUCUUCUCAACCCCUCACCUUUCCCUGAGGAGUGUGUUGUUUUCCCUGUUG2000000006AAAAAAGUUACAAAAAUAAAUCUUAAAGUUAGUUUUUUGUAACACGAAUUUAACUGUCAG2000000006ACAGUUAGUGUAGGUGUGUUGCGUCAUCUGUUUUCAACC2000000006AGAUUGCAUUUAUGG2000000006ACUUUUCACACACUCAUUUUGAGGACCCCAGGUUCAAAAGUAAAAGCAGUGGCCCUGCUUUGGGGUCCAAGAAUAGGAGUGAUGGGUGAAGGGACCUAAGCUGGCCAAUAGCCCUCUGCCCCAG2000000006ACAUGGGAUGUGGAUCCUUGAGGUUUCUGGUGAAAUCUGCACAUCUGUGUUUUUAUAUCUGUUCCCUACCCUGUAAUCCCUACCACGUGCACUUGUUCUGUGGUUUUGGUCUCUUGUUUAAUUGCACACAAGUAAUACUACUGGGUA2000000006ACCAGAAUCAGGUGUGAAUGUGUUGAGAUUUUUUACUGUUUUGCAUGAUAGGAAAAUUGAGAAAGAAUACGUAUAAAAGAUAGAGAGGCAUA2000000006ACAUCAAUGCAGAGUUGGAAGUUGGCUCCCAAGGGCUGACAUGGUGUGAGUGUGUGGGUGUGUGAUAAGCUUCUCA2000000009UCCCUGCAUAGAUGCAGUAUUCUUAGCCUUAGUAGAAAAACCUGGUUUAGUGGUUUAAGCCUUGUGUGGCAGAUAGAUCUUAAAGGGCAAAGCAGUAUAUUGGUAGUUGUCAAUAUAGCAGUGCUAGCUCUGUCUAUAUAAAUAGAGAAAUGGGGUUAGCCAUAGAGGUUAAAACUACCUGGUUAUCCCAUAUAAUAACACAAACUGGGUCUUGGAUACACAGUUGUAUUUAAUGUUUUACGAUCUAGCCUUUCCAGUACAGGCACUUUCUGAGAAACCUUUGUCCUCACUUGAGGCAUUUUGUUGUCGGGUUUUUGUGUUUGUUUUUGUGGGUAUUUGCCUCAUUCCACCCCUGAGCUUUCAGGUAGACAGACGUGAUUCAAAACUCUGUUCUAAGGUGUUUAUUGUAGUGGAGUAAUGGGUUUGCAGUGAUAAGUCAUACUUUUCCACCGAAAGGGAGGGCUUGGGAAUCCCUGAGAUUAGCUAAAGUUAAGUUGUUGGAAGAAUUCCUUGAUUGGAAAUUGUACCUUUGUGUUUUGUUGCUCUGUUUCCUGAAAAUAACUCGGGGAUGCUCCUGGUUUGUCCAUCUACUGCUUUGAUUCCUUGGAUCCCACCCAUUCUUUCACU2000000009UUAAGAAAAAACAAAUAAUUGUUGCAGAGGUCUCUGUAUUUUGCAGCUGCCCUUUUGUAAGAAGCACUUUUCCCAAAUAAAACAAUUAAAAAAAAAGUUGGCUGUUCUGUGUAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	332	528	646	648	774	958	994	1411	1444	1531	1538	1542	1546	1564	1631	1801	1861	1900	1915	2039	2186	2278	2354	2981
Modification Positions	m6A	m6A	Gm	Um	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	Y
Genomic Coordinates	7:140479174:-	7:140459884:-	7:140459766:-	7:140459764:-	7:140459165:-	7:140456841:-	7:140456805:-	7:140454716:-	7:140454683:-	7:140454596:-	7:140454589:-	7:140454585:-	7:140454581:-	7:140454563:-	7:140454496:-	7:140454326:-	7:140454266:-	7:140454227:-	7:140454212:-	7:140454088:-	7:140453941:-	7:140453849:-	7:140453773:-	7:140453146:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
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