General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000444874
Gene ID:	ENSG00000272752
Gene Name:	STAG3L5P-PVRIG2P-PILRB
Sequence (UNICHARACTER ENCODING)	GCGCCCCUCUCCGUGUGGAGCCCACCUGCAUGUACUGGCUCCCCAACAUGCACGGCAGGAGCGGCGGCCCAGCACUCGGCACUGGCCACUUGCAGACAAGAAGACAAGAAAAUGAUUUGAGGACAGCUUCAAUCGCGGUGUGAAGAAGAAAGCAACAAAACGACCACUGAAAACAAUGCCGGUGGCAAAACAUCCAAAGAAAGGGUCCCAAGUGGUACAUCGUCAUAGCUGGAAACAGUCAGAGCCACCAGCCAAUGAUCUUUUCAAUGCUGCGAAAGCUGCCAAAAGUGACAUGCAGUGUGGCCAUGAGGUCUGCCGGAAGUGACUUGUUGGUGUUAUCUCCUGAGUUAAAAUGUGAAGGGAUUUUUUUUUUUCAGAUUACUGAGAGUCUUCAGUUACUAGAUCCAGACACGGGGACUGCAGAGAAAGGCUGUGUGCAUCCGCUGUCUACUCCACUGUCUCCUCUGCAGAGGCGGAUUUCCCUGACUGAAGACCAUGUUGCAGGCCCACAGCUGCCUACAGAACCGUCCCAAAAUAUGGCAAAGAAACCUAUUCUGAGCGAUAGGGUCUCACCAUGUUGCCCAGGCUGGUCUUGAACUCCUGGACUCAUCCUAAAGUGCUGGCCUCUCAUUCCCUGUCUGUGCACACCUCACGGCAAGGGCCAGCCUGUUUCCUCCCGGUCACCUCCAAAUCUUGCUGCUUUUAAUUCAACUCAGAGAAGGGAAUCAGCCACUUUGUGCUCACCACCUCUGGGGAAGGUGUGAGAGGAGAGAAGGAAGUGGCUGUUUGGCUGCUGACAACAUGAAGACUUCCUGCGAUGAGAACAGAGGCACAGGUGCCGGCCCUGCAGCCCCCAGAACCCGGACUGGAGGGGGCCAUGGGGCGCCGGACCCUGGCCCUGCCCUGGGUGCUGCUGACCCUGCGUGUCACUGCAGGGACCCCGGAGGUGUGAGUACAAGUUCGGAUGGAGGCCACCGAGCUCUCGUCCUUCACCAUCCGUUGUGGGUUCCUGGAGUCUGGCUCCAUCUCCCUGGUGACUGUGAGCAGGGGGGGCCCCGAUGGUGCUGGGGGGACCACGCUGGCUGUGUUGCACCCGGAACUUGGCAUCCAGCAAUGGGCCCCUGCUCGCCAGGCCCGCUGGGAAACCCAGAGCAGCAUCUCUCUCAUCCUGGAAGGCUCUGGGGCCAGCAGCCCCUGCGCCAACACCACCUUCUGCUGCAAGUUUGCGUCCUUCCCUGAGGGCUCCUGGGAGGCCUGUGGGAGCCUCCCGCCCAGCUCAGACCCAGGGCUCUCUGUCCCGCCGACUCCUGCCCCCAUUCUGCGGGCAGACCUGGCCGGGAUCUUGGGGGUCUCAGGAGUCCUUCUCUUUGACUGUGGCUACCUCCUUCAUCUGCUGUGCCGACAGAAGCACCGCCCUGCCCCUAGGCUCCAGCCAUCCCACACCAGCUCCUAGGCACUGAGAGCACGAGCAUGGGCACCCAGCCAGGCCUCCCAGGCUGCUCUCCACGUCCCUUAUGCCACUAUCAACACCAGCUGCUGCCCAGCUACUUUGGACACAGCUCACCCCCGACAGGGGGCCGUCCUGGCAUAGCGCGCUGGCUAGGACUCCAGUACCGUGAAGGGAGGCAGUGAGAGCAGACAUCUGUGCCUCAUUCCUGAUCUCAAGGGGAAAGCAAGAACAAGGGAGGCUUCCUCAGGAUCUCGAACCUGCGGAAGGAGGACCAGUCUGUGUACUUCUGCCAAGUCCAGCUGGACAUACAGAUCAGGGAGGCUGUCGUGGCAGUCCAUCAAGGGGACCCACCUCACCAUCACCCAGGCCCUCAGGCAGCCCCUCCACAGGGCCCCUCUCCUGCCUGGACAGCUCUGCUGGUCUCCCCGUCCCCUGGAGAAGAACAAGGCCAUGGGUCGGCCCCUGCUGCUGCCCCUGCUGCUCCUGCUGCAGCCGCCAGCAUUUCUGCAGCCUGGAUUAUGUGAACCGGCUCUUUCUGAЖCUGGЖCAGAGGGUCAGGAGAGCGGCUUCCUCAGGAUCUCAAACCUGCGGAAGGAGGACCAGUCUGUGUAUUUCUGCCGAGUCGAGCUGGACACCCGGAGAUCAGGGAGGCAGCAGUUGCAGUCCAUCAAGGGGACCAAACUCACCAUCACCCAGGCUGUCACAACCACCACCACCUGGAGGCCCAGCAGCACAACCACCAUAGCCGGCCUCAGGGUCACAGAAAGCAAAGGGCACUCAGAAUCAUGGCACCUAAGUCUGGЖCACUGCCAUCAGGGUUGCAUUGGCUGUCGCUGUGCUCAAAACUGUCAUUUUGGGACUGCUGUGCCUCCUCCPCCUGUGGUGGAGGAGAAGGAAAGGUAGCAGGGCGCCAAGCAGUGACUUCUGACCAACAGAGUGUGGGGAGAAGGGAUGUGUAUUAGCCCCGGAGGACGUGAUGUGAGЖCCCGCUUGUGAGUCCUCCACACUCGUUCCCCAUUGGCAAGAUACAUGGAGAGCACCCUGAGGЖCCUPUAAAAGGCAAAGCCGCAAGGCAGAAGGAGGCUGGGUCCCUGAAUCACCGACUGGAGGAGAGUUACCUACЖAGAGCCUUCAPCCAGGAGCAPCCACACUGCAAUGAUAUAGGAAUGAGGUCUGAЖCUCCACUGAAUUAAACCACUGGCAUUUGGGGGCUGUUUA
Sequence (SHORT NAMES ENCODING)	GCGCCCCUCUCCGUGUGGAGCCCACCUGCAUGUACUGGCUCCCCAACAUGCACGGCAGGAGCGGCGGCCCAGCACUCGGCACUGGCCACUUGCAGACAAGAAGACAAGAAAAUGAUUUGAGGACAGCUUCAAUCGCGGUGUGAAGAAGAAAGCAACAAAACGACCACUGAAAACAAUGCCGGUGGCAAAACAUCCAAAGAAAGGGUCCCAAGUGGUACAUCGUCAUAGCUGGAAACAGUCAGAGCCACCAGCCAAUGAUCUUUUCAAUGCUGCGAAAGCUGCCAAAAGUGACAUGCAGUGUGGCCAUGAGGUCUGCCGGAAGUGACUUGUUGGUGUUAUCUCCUGAGUUAAAAUGUGAAGGGAUUUUUUUUUUUCAGAUUACUGAGAGUCUUCAGUUACUAGAUCCAGACACGGGGACUGCAGAGAAAGGCUGUGUGCAUCCGCUGUCUACUCCACUGUCUCCUCUGCAGAGGCGGAUUUCCCUGACUGAAGACCAUGUUGCAGGCCCACAGCUGCCUACAGAACCGUCCCAAAAUAUGGCAAAGAAACCUAUUCUGAGCGAUAGGGUCUCACCAUGUUGCCCAGGCUGGUCUUGAACUCCUGGACUCAUCCUAAAGUGCUGGCCUCUCAUUCCCUGUCUGUGCACACCUCACGGCAAGGGCCAGCCUGUUUCCUCCCGGUCACCUCCAAAUCUUGCUGCUUUUAAUUCAACUCAGAGAAGGGAAUCAGCCACUUUGUGCUCACCACCUCUGGGGAAGGUGUGAGAGGAGAGAAGGAAGUGGCUGUUUGGCUGCUGACAACAUGAAGACUUCCUGCGAUGAGAACAGAGGCACAGGUGCCGGCCCUGCAGCCCCCAGAACCCGGACUGGAGGGGGCCAUGGGGCGCCGGACCCUGGCCCUGCCCUGGGUGCUGCUGACCCUGCGUGUCACUGCAGGGACCCCGGAGGUGUGAGUACAAGUUCGGAUGGAGGCCACCGAGCUCUCGUCCUUCACCAUCCGUUGUGGGUUCCUGGAGUCUGGCUCCAUCUCCCUGGUGACUGUGAGCAGGGGGGGCCCCGAUGGUGCUGGGGGGACCACGCUGGCUGUGUUGCACCCGGAACUUGGCAUCCAGCAAUGGGCCCCUGCUCGCCAGGCCCGCUGGGAAACCCAGAGCAGCAUCUCUCUCAUCCUGGAAGGCUCUGGGGCCAGCAGCCCCUGCGCCAACACCACCUUCUGCUGCAAGUUUGCGUCCUUCCCUGAGGGCUCCUGGGAGGCCUGUGGGAGCCUCCCGCCCAGCUCAGACCCAGGGCUCUCUGUCCCGCCGACUCCUGCCCCCAUUCUGCGGGCAGACCUGGCCGGGAUCUUGGGGGUCUCAGGAGUCCUUCUCUUUGACUGUGGCUACCUCCUUCAUCUGCUGUGCCGACAGAAGCACCGCCCUGCCCCUAGGCUCCAGCCAUCCCACACCAGCUCCUAGGCACUGAGAGCACGAGCAUGGGCACCCAGCCAGGCCUCCCAGGCUGCUCUCCACGUCCCUUAUGCCACUAUCAACACCAGCUGCUGCCCAGCUACUUUGGACACAGCUCACCCCCGACAGGGGGCCGUCCUGGCAUAGCGCGCUGGCUAGGACUCCAGUACCGUGAAGGGAGGCAGUGAGAGCAGACAUCUGUGCCUCAUUCCUGAUCUCAAGGGGAAAGCAAGAACAAGGGAGGCUUCCUCAGGAUCUCGAACCUGCGGAAGGAGGACCAGUCUGUGUACUUCUGCCAAGUCCAGCUGGACAUACAGAUCAGGGAGGCUGUCGUGGCAGUCCAUCAAGGGGACCCACCUCACCAUCACCCAGGCCCUCAGGCAGCCCCUCCACAGGGCCCCUCUCCUGCCUGGACAGCUCUGCUGGUCUCCCCGUCCCCUGGAGAAGAACAAGGCCAUGGGUCGGCCCCUGCUGCUGCCCCUGCUGCUCCUGCUGCAGCCGCCAGCAUUUCUGCAGCCUGGAUUAUGUGAACCGGCUCUUUCUGAm6ACUGGm6ACAGAGGGUCAGGAGAGCGGCUUCCUCAGGAUCUCAAACCUGCGGAAGGAGGACCAGUCUGUGUAUUUCUGCCGAGUCGAGCUGGACACCCGGAGAUCAGGGAGGCAGCAGUUGCAGUCCAUCAAGGGGACCAAACUCACCAUCACCCAGGCUGUCACAACCACCACCACCUGGAGGCCCAGCAGCACAACCACCAUAGCCGGCCUCAGGGUCACAGAAAGCAAAGGGCACUCAGAAUCAUGGCACCUAAGUCUGGm6ACACUGCCAUCAGGGUUGCAUUGGCUGUCGCUGUGCUCAAAACUGUCAUUUUGGGACUGCUGUGCCUCCUCCYCCUGUGGUGGAGGAGAAGGAAAGGUAGCAGGGCGCCAAGCAGUGACUUCUGACCAACAGAGUGUGGGGAGAAGGGAUGUGUAUUAGCCCCGGAGGACGUGAUGUGAGm6ACCCGCUUGUGAGUCCUCCACACUCGUUCCCCAUUGGCAAGAUACAUGGAGAGCACCCUGAGGm6ACCUYUAAAAGGCAAAGCCGCAAGGCAGAAGGAGGCUGGGUCCCUGAAUCACCGACUGGAGGAGAGUUACCUACm6AAGAGCCUUCAYCCAGGAGCAYCCACACUGCAAUGAUAUAGGAAUGAGGUCUGAm6ACUCCACUGAAUUAAACCACUGGCAUUUGGGGGCUGUUUA
Sequence (MODOMICS CODE ENCODING)	GCGCCCCUCUCCGUGUGGAGCCCACCUGCAUGUACUGGCUCCCCAACAUGCACGGCAGGAGCGGCGGCCCAGCACUCGGCACUGGCCACUUGCAGACAAGAAGACAAGAAAAUGAUUUGAGGACAGCUUCAAUCGCGGUGUGAAGAAGAAAGCAACAAAACGACCACUGAAAACAAUGCCGGUGGCAAAACAUCCAAAGAAAGGGUCCCAAGUGGUACAUCGUCAUAGCUGGAAACAGUCAGAGCCACCAGCCAAUGAUCUUUUCAAUGCUGCGAAAGCUGCCAAAAGUGACAUGCAGUGUGGCCAUGAGGUCUGCCGGAAGUGACUUGUUGGUGUUAUCUCCUGAGUUAAAAUGUGAAGGGAUUUUUUUUUUUCAGAUUACUGAGAGUCUUCAGUUACUAGAUCCAGACACGGGGACUGCAGAGAAAGGCUGUGUGCAUCCGCUGUCUACUCCACUGUCUCCUCUGCAGAGGCGGAUUUCCCUGACUGAAGACCAUGUUGCAGGCCCACAGCUGCCUACAGAACCGUCCCAAAAUAUGGCAAAGAAACCUAUUCUGAGCGAUAGGGUCUCACCAUGUUGCCCAGGCUGGUCUUGAACUCCUGGACUCAUCCUAAAGUGCUGGCCUCUCAUUCCCUGUCUGUGCACACCUCACGGCAAGGGCCAGCCUGUUUCCUCCCGGUCACCUCCAAAUCUUGCUGCUUUUAAUUCAACUCAGAGAAGGGAAUCAGCCACUUUGUGCUCACCACCUCUGGGGAAGGUGUGAGAGGAGAGAAGGAAGUGGCUGUUUGGCUGCUGACAACAUGAAGACUUCCUGCGAUGAGAACAGAGGCACAGGUGCCGGCCCUGCAGCCCCCAGAACCCGGACUGGAGGGGGCCAUGGGGCGCCGGACCCUGGCCCUGCCCUGGGUGCUGCUGACCCUGCGUGUCACUGCAGGGACCCCGGAGGUGUGAGUACAAGUUCGGAUGGAGGCCACCGAGCUCUCGUCCUUCACCAUCCGUUGUGGGUUCCUGGAGUCUGGCUCCAUCUCCCUGGUGACUGUGAGCAGGGGGGGCCCCGAUGGUGCUGGGGGGACCACGCUGGCUGUGUUGCACCCGGAACUUGGCAUCCAGCAAUGGGCCCCUGCUCGCCAGGCCCGCUGGGAAACCCAGAGCAGCAUCUCUCUCAUCCUGGAAGGCUCUGGGGCCAGCAGCCCCUGCGCCAACACCACCUUCUGCUGCAAGUUUGCGUCCUUCCCUGAGGGCUCCUGGGAGGCCUGUGGGAGCCUCCCGCCCAGCUCAGACCCAGGGCUCUCUGUCCCGCCGACUCCUGCCCCCAUUCUGCGGGCAGACCUGGCCGGGAUCUUGGGGGUCUCAGGAGUCCUUCUCUUUGACUGUGGCUACCUCCUUCAUCUGCUGUGCCGACAGAAGCACCGCCCUGCCCCUAGGCUCCAGCCAUCCCACACCAGCUCCUAGGCACUGAGAGCACGAGCAUGGGCACCCAGCCAGGCCUCCCAGGCUGCUCUCCACGUCCCUUAUGCCACUAUCAACACCAGCUGCUGCCCAGCUACUUUGGACACAGCUCACCCCCGACAGGGGGCCGUCCUGGCAUAGCGCGCUGGCUAGGACUCCAGUACCGUGAAGGGAGGCAGUGAGAGCAGACAUCUGUGCCUCAUUCCUGAUCUCAAGGGGAAAGCAAGAACAAGGGAGGCUUCCUCAGGAUCUCGAACCUGCGGAAGGAGGACCAGUCUGUGUACUUCUGCCAAGUCCAGCUGGACAUACAGAUCAGGGAGGCUGUCGUGGCAGUCCAUCAAGGGGACCCACCUCACCAUCACCCAGGCCCUCAGGCAGCCCCUCCACAGGGCCCCUCUCCUGCCUGGACAGCUCUGCUGGUCUCCCCGUCCCCUGGAGAAGAACAAGGCCAUGGGUCGGCCCCUGCUGCUGCCCCUGCUGCUCCUGCUGCAGCCGCCAGCAUUUCUGCAGCCUGGAUUAUGUGAACCGGCUCUUUCUGA2000000006ACUGG2000000006ACAGAGGGUCAGGAGAGCGGCUUCCUCAGGAUCUCAAACCUGCGGAAGGAGGACCAGUCUGUGUAUUUCUGCCGAGUCGAGCUGGACACCCGGAGAUCAGGGAGGCAGCAGUUGCAGUCCAUCAAGGGGACCAAACUCACCAUCACCCAGGCUGUCACAACCACCACCACCUGGAGGCCCAGCAGCACAACCACCAUAGCCGGCCUCAGGGUCACAGAAAGCAAAGGGCACUCAGAAUCAUGGCACCUAAGUCUGG2000000006ACACUGCCAUCAGGGUUGCAUUGGCUGUCGCUGUGCUCAAAACUGUCAUUUUGGGACUGCUGUGCCUCCUCC2000000009UCCUGUGGUGGAGGAGAAGGAAAGGUAGCAGGGCGCCAAGCAGUGACUUCUGACCAACAGAGUGUGGGGAGAAGGGAUGUGUAUUAGCCCCGGAGGACGUGAUGUGAG2000000006ACCCGCUUGUGAGUCCUCCACACUCGUUCCCCAUUGGCAAGAUACAUGGAGAGCACCCUGAGG2000000006ACCU2000000009UUAAAAGGCAAAGCCGCAAGGCAGAAGGAGGCUGGGUCCCUGAAUCACCGACUGGAGGAGAGUUACCUAC2000000006AAGAGCCUUCA2000000009UCCAGGAGCA2000000009UCCACACUGCAAUGAUAUAGGAAUGAGGUCUGA2000000006ACUCCACUGAAUUAAACCACUGGCAUUUGGGGGCUGUUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1990	1995	2251	2323	2431	2494	2498	2568	2579	2589	2622
Modification Positions	m6A	m6A	m6A	Y	m6A	m6A	Y	m6A	Y	Y	m6A
Genomic Coordinates	7:100358924:+	7:100358929:+	7:100359442:+	7:100359514:+	7:100367433:+	7:100367496:+	7:100367500:+	7:100367570:+	7:100367581:+	7:100367591:+	7:100367624:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq Yfn77uLS5tv8	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se WiQcrNTGZHPT Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se Lny8GcCeVGc9 UKen6WEino9G dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 BkoLW2CBToyL Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac a7o5Kmjr4Tdp Yfn77uLS5tv8