General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000393991
Gene ID:	ENSG00000166925
Gene Name:	TSC22D4
Sequence (UNICHARACTER ENCODING)	GGЖCUUCCUGGUGUGGGGGUUGUCAACAGCCCAGAAAGAGAAAGACGGAGAGGCAGAGACCCAGGGGAGCCGAGGAGCGGAGACACGGACCCAGCAGGGUCACGCGGGAGGAGACUCGGGACACCCACUCGCUGGCUGCCACCGGGAGCAGAGGGGGGCUCGGCCGCCCCCUCCCACAUCAGUCUCCAGACCCUUGGGGCUUCAGAGGCCGCUCCUAGGCUCCUCGGAGGAGGCGCGGGUUUCUUCUUUUCCGGAGAGCAAACUUUCCUCGGAGAUGCCUGGCAGGAUGAGCCGCGGCCCCCGGAGAGGACGGGACAGCCUCUGAUCGCCGCCUGCGUGCCCCGCCACUGCCCAUGGCCAGGAGGCCCCAGGGAACGGACAGCCCGACCUCUUAGGCGCCGGGACCCUCAGGCUCAGAUCAGUGGCCGAGGCCCCAGAGCGCCCCCCAGAGCCUGAGACCGGUGAGAGUGCGGGCACAPCCCGGGCUGCCACGCCCCUGCCCUCUCUGAGGGUGGAAGCGGAGGCUGGGGGCUCAGGGGCCAGGACCCCUCCACUGUCCCGGAGGAAAGCUGUAGACAUGCGGCUGCGGAUGGAGUUGGGUGCUCCAGAAGAGAUGGGGCAGGUGCCCCCACUUGACUCUCGCCCCAGCUCCCCAGCCCUCUACUUCACCCACGAUGCCAGCCUGGUUCACAAAUCUCCAGACCCCUUCGGAGCAGUAGCAGCUCAGAAGUUCAGCCUGGCCCACUCCAUGUUGGCCAUCAGUGGUCACCUAGACAGCGACGAUGAUAGUGGCUCCGGAAGCCUGGUUGGCAUUGACAACAAAAUCGAGCAAGCCAUGGACUUGGUGAAGUCCCACCUCAUGUUUGCGGUCCGGGAGGAGGUGGAGGUGCUGAAGGAGCAGAUCCGGGAAUUGGCGGAGCGGAACGCUGCGCUGGAGCAGGAGAAUGGGCUGCUGCGCGCCCUGGCCAGCCCGGAGCAGCUGGCUCAGCUGCCCUCCUCGGGGGUCCCACGGCUUGGGCCCCCUGCGCCCAAUGGGCCCUCCGUCUGAGCCUCCCUUCCCUUACAAUGUGCCUUUGGGGCUGCCCGGCCUUGCGUCAGCCGCCUGCCCCCUCUUCCUAUGCAGCUPUAAUGUCCCCGUGUCCCCGGGGUGGGAGUUCAAGGCUCAGUAAUGGCCUGGUCCCCCGGCCCCUGCCCCAUCUCCUCAUCAUCCCCAGCCUUGAUGGAGGAGGGAGGGCUUCAGGACGGGGCGUCAGAGGGAGCCCCCUCUGGGAGGGAACCAACCCCCACCCPCCCUCCUGGGACCCCCCAGCAGUAGACGGCUUGGGGGAGUCGGAGGCUCCCCGGCAGACACCCCACCCCCAUCUUGUUCCCUUGAGGUGCCPCCUCUCCUCUGCCCAGGGGAGGGAGUGUGGЖCAGUAUCUGGAAGUUCUGGGAUUCAGGUUGUUAUUAAAAUAAUAAUAAUAAUUAAA
Sequence (SHORT NAMES ENCODING)	GGm6ACUUCCUGGUGUGGGGGUUGUCAACAGCCCAGAAAGAGAAAGACGGAGAGGCAGAGACCCAGGGGAGCCGAGGAGCGGAGACACGGACCCAGCAGGGUCACGCGGGAGGAGACUCGGGACACCCACUCGCUGGCUGCCACCGGGAGCAGAGGGGGGCUCGGCCGCCCCCUCCCACAUCAGUCUCCAGACCCUUGGGGCUUCAGAGGCCGCUCCUAGGCUCCUCGGAGGAGGCGCGGGUUUCUUCUUUUCCGGAGAGCAAACUUUCCUCGGAGAUGCCUGGCAGGAUGAGCCGCGGCCCCCGGAGAGGACGGGACAGCCUCUGAUCGCCGCCUGCGUGCCCCGCCACUGCCCAUGGCCAGGAGGCCCCAGGGAACGGACAGCCCGACCUCUUAGGCGCCGGGACCCUCAGGCUCAGAUCAGUGGCCGAGGCCCCAGAGCGCCCCCCAGAGCCUGAGACCGGUGAGAGUGCGGGCACAYCCCGGGCUGCCACGCCCCUGCCCUCUCUGAGGGUGGAAGCGGAGGCUGGGGGCUCAGGGGCCAGGACCCCUCCACUGUCCCGGAGGAAAGCUGUAGACAUGCGGCUGCGGAUGGAGUUGGGUGCUCCAGAAGAGAUGGGGCAGGUGCCCCCACUUGACUCUCGCCCCAGCUCCCCAGCCCUCUACUUCACCCACGAUGCCAGCCUGGUUCACAAAUCUCCAGACCCCUUCGGAGCAGUAGCAGCUCAGAAGUUCAGCCUGGCCCACUCCAUGUUGGCCAUCAGUGGUCACCUAGACAGCGACGAUGAUAGUGGCUCCGGAAGCCUGGUUGGCAUUGACAACAAAAUCGAGCAAGCCAUGGACUUGGUGAAGUCCCACCUCAUGUUUGCGGUCCGGGAGGAGGUGGAGGUGCUGAAGGAGCAGAUCCGGGAAUUGGCGGAGCGGAACGCUGCGCUGGAGCAGGAGAAUGGGCUGCUGCGCGCCCUGGCCAGCCCGGAGCAGCUGGCUCAGCUGCCCUCCUCGGGGGUCCCACGGCUUGGGCCCCCUGCGCCCAAUGGGCCCUCCGUCUGAGCCUCCCUUCCCUUACAAUGUGCCUUUGGGGCUGCCCGGCCUUGCGUCAGCCGCCUGCCCCCUCUUCCUAUGCAGCUYUAAUGUCCCCGUGUCCCCGGGGUGGGAGUUCAAGGCUCAGUAAUGGCCUGGUCCCCCGGCCCCUGCCCCAUCUCCUCAUCAUCCCCAGCCUUGAUGGAGGAGGGAGGGCUUCAGGACGGGGCGUCAGAGGGAGCCCCCUCUGGGAGGGAACCAACCCCCACCCYCCCUCCUGGGACCCCCCAGCAGUAGACGGCUUGGGGGAGUCGGAGGCUCCCCGGCAGACACCCCACCCCCAUCUUGUUCCCUUGAGGUGCCYCCUCUCCUCUGCCCAGGGGAGGGAGUGUGGm6ACAGUAUCUGGAAGUUCUGGGAUUCAGGUUGUUAUUAAAAUAAUAAUAAUAAUUAAA
Sequence (MODOMICS CODE ENCODING)	GG2000000006ACUUCCUGGUGUGGGGGUUGUCAACAGCCCAGAAAGAGAAAGACGGAGAGGCAGAGACCCAGGGGAGCCGAGGAGCGGAGACACGGACCCAGCAGGGUCACGCGGGAGGAGACUCGGGACACCCACUCGCUGGCUGCCACCGGGAGCAGAGGGGGGCUCGGCCGCCCCCUCCCACAUCAGUCUCCAGACCCUUGGGGCUUCAGAGGCCGCUCCUAGGCUCCUCGGAGGAGGCGCGGGUUUCUUCUUUUCCGGAGAGCAAACUUUCCUCGGAGAUGCCUGGCAGGAUGAGCCGCGGCCCCCGGAGAGGACGGGACAGCCUCUGAUCGCCGCCUGCGUGCCCCGCCACUGCCCAUGGCCAGGAGGCCCCAGGGAACGGACAGCCCGACCUCUUAGGCGCCGGGACCCUCAGGCUCAGAUCAGUGGCCGAGGCCCCAGAGCGCCCCCCAGAGCCUGAGACCGGUGAGAGUGCGGGCACA2000000009UCCCGGGCUGCCACGCCCCUGCCCUCUCUGAGGGUGGAAGCGGAGGCUGGGGGCUCAGGGGCCAGGACCCCUCCACUGUCCCGGAGGAAAGCUGUAGACAUGCGGCUGCGGAUGGAGUUGGGUGCUCCAGAAGAGAUGGGGCAGGUGCCCCCACUUGACUCUCGCCCCAGCUCCCCAGCCCUCUACUUCACCCACGAUGCCAGCCUGGUUCACAAAUCUCCAGACCCCUUCGGAGCAGUAGCAGCUCAGAAGUUCAGCCUGGCCCACUCCAUGUUGGCCAUCAGUGGUCACCUAGACAGCGACGAUGAUAGUGGCUCCGGAAGCCUGGUUGGCAUUGACAACAAAAUCGAGCAAGCCAUGGACUUGGUGAAGUCCCACCUCAUGUUUGCGGUCCGGGAGGAGGUGGAGGUGCUGAAGGAGCAGAUCCGGGAAUUGGCGGAGCGGAACGCUGCGCUGGAGCAGGAGAAUGGGCUGCUGCGCGCCCUGGCCAGCCCGGAGCAGCUGGCUCAGCUGCCCUCCUCGGGGGUCCCACGGCUUGGGCCCCCUGCGCCCAAUGGGCCCUCCGUCUGAGCCUCCCUUCCCUUACAAUGUGCCUUUGGGGCUGCCCGGCCUUGCGUCAGCCGCCUGCCCCCUCUUCCUAUGCAGCU2000000009UUAAUGUCCCCGUGUCCCCGGGGUGGGAGUUCAAGGCUCAGUAAUGGCCUGGUCCCCCGGCCCCUGCCCCAUCUCCUCAUCAUCCCCAGCCUUGAUGGAGGAGGGAGGGCUUCAGGACGGGGCGUCAGAGGGAGCCCCCUCUGGGAGGGAACCAACCCCCACCC2000000009UCCCUCCUGGGACCCCCCAGCAGUAGACGGCUUGGGGGAGUCGGAGGCUCCCCGGCAGACACCCCACCCCCAUCUUGUUCCCUUGAGGUGCC2000000009UCCUCUCCUCUGCCCAGGGGAGGGAGUGUGG2000000006ACAGUAUCUGGAAGUUCUGGGAUUCAGGUUGUUAUUAAAAUAAUAAUAAUAAUUAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	3	479	1126	1290	1382	1413
Modification Positions	m6A	Y	Y	Y	Y	m6A
Genomic Coordinates	7:100479230:-	7:100477420:-	7:100466881:-	7:100466717:-	7:100466625:-	7:100466594:-
Level of Experimental Evidence	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn ArijeGVTwYBw WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8