Modomics - A Database of RNA Modifications

ID Card:

Full name: tRNA (uracil(54)-C(5))-methyltransferase homolog
Synonym: TRM2 homolog
UniProt: Q8BQJ6
Enzyme type:
Position of modification - modification: t:None - m5U
:425(None) - m5U
Level of experimental evidence: 2
Level of experimental reliability: 2



Protein sequence:

MHNPRLFLSRAGFFSKPGLLPWDTGRPPDLSQSLLGRAYKGSFTSVIAKKHPSRQKYQKKQRHCRDDSWQERLADVVTPLWRLSYEAQLKVKFEAQKKLLQSLESHLKVLHGVSDTVAAHQSEGLRCLLHPIIPSPTTTGYRNKSTFSVYRSPDGNPKTVGYYLGTWKDGNVVCLPCNHLKNIPEKHSQVAQYYEVFLRQSSVEPCLLFHEGGHWRELVVRTNRQGHTMAIVTFHPQGLSEEEVCVQKVTLKDFFTKGPGAICELTSLYFQESTMTRCSHQQSPYQLLFGEPHIFEDLLGLKIRISPDAFFQINTAGAEMLYRIIGELSGVNSESLLLDICCGTGVIGLSVAQRASQVHGIELVEQAVEDARWTAAFNGVTNCEFHAGRAETILPQLLKSQKDEKLTVAVVNPARAGLHYRVVRAIRNCRTIHTLVFVSCKPHGESTRNFIELCCPPNSAKQLLGDPFVLREAVPVDLFPHTPHCELVLLFTR

Comments:

TRMT2B is responsible for both tRNA and rRNA m5U-methylation in human mitochondria. TRMT2B is not essential for viability in human cells. Knoc-out of the TRMT2B gene shows no obvious phenotype with regards to RNA stability, mitochondrial translation, or cellular growth.




Reaction Substrate SubstrateType Position (Anti)Codon Modified (Anti)Codon Amino Acid Change Transcript Name Transcript Region Cellular Localization References
U:m5U tRNA (t) tRNA/tRNA/eukaryotic mitochondrial 54
U:m5U rRNA (r) rRNA/rRNA/eukaryotic mitochondria 425



Publications:

Title Authors Journal Details PubMed Id DOI
Mouse Trmt2B protein is a dual specific mitochondrial metyltransferase responsible for mU formation in both tRNA and rRNA. Ivan Laptev,Ekaterina Shvetsova,Sergey Levitskii,Marina Serebryakova,Maria Rubtsova,Alexey Bogdanov,Piotr Kamenski,Petr Sergiev,Olga Dontsova RNA Biol [details] 31736397 -