| ID | Type | Subtype | Feature | Organism | Sequence |
|---|---|---|---|---|---|
| 32 | rRNA | 16S | SSU | Escherichia coli | |
| 260 | rRNA | 16S | SSU | Clostridium acetobutylicum | |
| 277 | rRNA | 16S | SSU | Thermus thermophilus | |
| 278 | rRNA | 16S | SSU | Thermotoga maritima | |
| 280 | rRNA | 16S | SSU | Bacillus subtilis | |
| 1075 | rRNA | 16S | SSU | Thermus thermophilus | -----UGGAGAGUU-UGAU-CCUGGCUCAGGGUGAACGCU-GG-CGG--CGUG-CCUAAGACAUGCAAGUCGUGCG-GGC------------CGCGGGGUU----UUACUCC-G-UG------------------------------------------------------------------------------------------------------------------------------GUC--AG-CGGCGGA-CGGGUGAGUAACGCGUGGGU--GACCUACCCGGAAGAGG--GGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACC--CGC--CCC--UU----GGG--G-UG-U-G-UC-CA-AA-GGG--------------------------------------------------------CUUUG-----CCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCG-GUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGC-GCAAGCCUGACGGAGCGACGCCGCUUGGAG-GA-AGAAGCCC---UUCG--GGGUGUAAACUCCUGA-ACCCGGG-ACGAAA-CCCCCGAC-------------GAG-----GGGA--CUGACGGUACCGGGGUAA-UA-GC-GCCGGCCAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGG-CGUGUAGGCGGCCUGGGG-CGUCCC-AUGUGAAAGACCA-CGGCUCAACCG-UG-GGGGAGCGUGGGAUACGCUCA-GGCUA-GACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGA--UGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAG-GCGCGAAA-GCG-UGGGGAGCAAACCGG-AUUAGAUACCCGGGUAGUCCA-CGCCCUAAA-CGAU-GCGC--GC-UAGG-UCUC-UGGG----------------------------------UCU----CCUGGGGGCC-------GAA-GCUAACGCGUUAAGCGCGCCGCC--UGGG-GAGUAC-GGCCGCAAGGCUGAAACUCAAA-GGAAUUGACGGGGGCCCG-CAC-AAGCGGUGGAGCAUGUGGUUUAAUUCGAAR?AACGCGAAGAACCUUA-CCAGGCCUUGACAUGCUAGGG------------AACCCGGGUG-AAAGCCU-GGGG--UGCCCCGC------------------------------GAGGGGAG----CCCUAGCACAG-GUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCG-CAACGAGCGCAACCCCCGCCGUUAGUUGCC-AGCGG------UUCGG-------------CCG--GG-CACUCUAACGGGACUGCCCGCG---AAA-GCGG-GAGGAAGGAGGGGACGACGUCUGGUCAGCAUGLCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCC-CACU-ACAAAGCGA---UGCCACCCGGCAACGGGGA-GCUAAUCGCAA-AAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCC--------------------GACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUC-AGCCAU-------------------------GCCGCGGUGAAUACGU-UCCCGGGCCUUGUACACAC?GλC?GU?ACGCCAUGGGAGCGGGC-UCU-ACCCGAAGUCGC-C-G-GGAG---CC---UACG----------------GG---CA-GGCGCCGAGGGU-AGGGCCCGUGACUGGGGCGA-AGU-CGΔAACAAGGUAG-CUGUACCGGZZGGUGCGG---CU-GGAUCCPPUCU----- |
| 1076 | rRNA | 16S | SSU | Thermus thermophilus | -----UGGAGAGUU-UGAU-CCUGGCUCAGGGUGAACGCU-GG-CGG--CGUG-CCUAAGACAUGCAAGUCGUGCG-GGC------------CGCGGGGUU----UUACUCC-G-UG------------------------------------------------------------------------------------------------------------------------------GUC--AG-CGGCGGA-CGGGUGAGUAACGCGUGGGU--GACCUACCCGGAAGAGG--GGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACC--CGC--CCC--UU----GGG--G-UG-U-G-UC-CA-AA-GGG--------------------------------------------------------CUUUG-----CCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCG-GUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGC-GCAAGCCUGACGGAGCGACGCCGCUUGGAG-GA-AGAAGCCC---UUCG--GGGUGUAAACUCCUGA-ACCCGGG-ACGAAA-CCCCCGAC-------------GAG-----GGGA--CUGACGGUACCGGGGUAA-UA-GC-GCCGGCCAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGG-CGUGUAGGCGGCCUGGGG-CGUCCC-AUGUGAAAGACCA-CGGCUCAACCG-UG-GGGGAGCGUGGGAUACGCUCA-GGCUA-GACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGA--UGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAG-GCGCGAAA-GCG-UGGGGAGCAAACCGG-AUUAGAUACCCGGGUAGUCCA-CGCCCUAAA-CGAU-GCGC--GC-UAGG-UCUC-UGGG----------------------------------UCU----CCUGGGGGCC-------GAA-GCUAACGCGUUAAGCGCGCCGCC--UGGG-GAGUAC-GGCCGCAAGGCUGAAACUCAAA-GGAAUUGACGGGGGCCCG-CAC-AAGCGGUGGAGCAUGUGGUUUAAUUCGAAR?AACGCGAAGAACCUUA-CCAGGCCUUGACAUGCUAGGG------------AACCCGGGUG-AAAGCCU-GGGG--UGCCCCGC------------------------------GAGGGGAG----CCCUAGCACAG-GUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCG-CAACGAGCGCAACCCCCGCCGUUAGUUGCC-AGCGG------UUCGG-------------CCG--GG-CACUCUAACGGGACUGCCCGCG---AAA-GCGG-GAGGAAGGAGGGGACGACGUCUGGUCAGCAUGLCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCC-CACU-ACAAAGCGA---UGCCACCCGGCAACGGGGA-GCUAAUCGCAA-AAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCC--------------------GACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUC-AGCCAU-------------------------GCCGCGGUGAAUACGU-UCCCGGGCCUUGUACACAC?GλC?GU?ACGCCAUGGGAGCGGGC-UCU-ACCCGAAGUCGC-C-G-GGAG---CC---UACG----------------GG---CA-GGCGCCGAGGGU-AGGGCCCGUGACUGGGGCGA-AGU-CGΔAACAAGGUAG-CUGUACCGGZZGGUGCGG---CU-GGAUCPPUCU------ |
| 1077 | rRNA | 16S | SSU | Thermus thermophilus | ---GUUGGAGAGUU-UGAU-CCUGGCUCAGGGUGAACGCU-GG-CGG--CGUG-CCUAAGACAUGCAAGUCGUGCG-GGC------------CGCGGGGUU----UUACUCC-G-UG------------------------------------------------------------------------------------------------------------------------------GUC--AG-CGGCGGA-CGGGUGAGUAACGCGUGGGU--GACCUACCCGGAAGAGG--GGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACC--CGC--CCC--UU----GGG--G-UG-U-G-UC-CA-AA-GGG--------------------------------------------------------CUUUG-----CCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCG-GUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGC-GCAAGCCUGACGGAGCGACGCCGCUUGGAG-GA-AGAAGCCC---UUCG--GGGUGUAAACUCCUGA-ACCCGGG-ACGAAA-CCCCCGAC-------------GAG-----GGGA--CUGACGGUACCGGGGUAA-UA-GC-GCCGGCCAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGG-CGUGUAGGCGGCCUGGGG-CGUCCC-AUGUGAAAGACCA-CGGCUCAACCG-UG-GGGGAGCGUGGGAUACGCUCA-GGCUA-GACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGA--UGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAG-GCGCGAAA-GCG-UGGGGAGCAAACCGG-AUUAGAUACCCGGGUAGUCCA-CGCCCUAAA-CGAU-GCGC--GC-UAGG-UCUC-UGGG----------------------------------UCU----CCUGGGGGCC-------GAA-GCUAACGCGUUAAGCGCGCCGCC--UGGG-GAGUAC-GGCCGCAAGGCUGAAACUCAAA-GGAAUUGACGGGGGCCCG-CAC-AAGCGGUGGAGCAUGUGGUUUAAUUCGAAR?AACGCGAAGAACCUUA-CCAGGCCUUGACAUGCUAGGG------------AACCCGGGUG-AAAGCCU-GGGG--UGCCCCGC------------------------------GAGGGGAG----CCCUAGCACAG-GUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCG-CAACGAGCGCAACCCCCGCCGUUAGUUGCC-AGCGG------UUCGG-------------CCG--GG-CACUCUAACGGGACUGCCCGCG---AAA-GCGG-GAGGAAGGAGGGGACGACGUCUGGUCAGCAUGLCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCC-CACU-ACAAAGCGA---UGCCACCCGGCAACGGGGA-GCUAAUCGCAA-AAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCC--------------------GACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUC-AGCCAU-------------------------GCCGCGGUGAAUACGU-UCCCGGGCCUUGUACACAC?GλC?GU?ACGCCAUGGGAGCGGGC-UCU-ACCCGAAGUCGC-C-G-GGAG---CC---UACG----------------GG---CA-GGCGCCGAGGGU-AGGGCCCGUGACUGGGGCGA-AGU-CGΔAACAAGGUAG-CUGUACCGGZZGGUGCGG---CU-GGAUCCPPUCU----- |
| 1078 | rRNA | 16S | SSU | Thermus thermophilus | ---GUUGGAGAGUU-UGAU-CCUGGCUCAGGGUGAACGCU-GG-CGG--CGUG-CCUAAGACAUGCAAGUCGUGCG-GGC------------CGCGGGGUU----UUACUCC-G-UG------------------------------------------------------------------------------------------------------------------------------GUC--AG-CGGCGGA-CGGGUGAGUAACGCGUGGGU--GACCUACCCGGAAGAGG--GGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACC--CGC--CCC--UU----GGG--G-UG-U-G-UC-CA-AA-GGG--------------------------------------------------------CUUUG-----CCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCG-GUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGC-GCAAGCCUGACGGAGCGACGCCGCUUGGAG-GA-AGAAGCCC---UUCG--GGGUGUAAACUCCUGA-ACCCGGG-ACGAAA-CCCCCGAC-------------GAG-----GGGA--CUGACGGUACCGGGGUAA-UA-GC-GCCGGCCAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGG-CGUGUAGGCGGCCUGGGG-CGUCCC-AUGUGAAAGACCA-CGGCUCAACCG-UG-GGGGAGCGUGGGAUACGCUCA-GGCUA-GACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGA--UGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAG-GCGCGAAA-GCG-UGGGGAGCAAACCGG-AUUAGAUACCCGGGUAGUCCA-CGCCCUAAA-CGAU-GCGC--GC-UAGG-UCUC-UGGG----------------------------------UCU----CCUGGGGGCC-------GAA-GCUAACGCGUUAAGCGCGCCGCC--UGGG-GAGUAC-GGCCGCAAGGCUGAAACUCAAA-GGAAUUGACGGGGGCCCG-CAC-AAGCGGUGGAGCAUGUGGUUUAAUUCGAAR?AACGCGAAGAACCUUA-CCAGGCCUUGACAUGCUAGGG------------AACCCGGGUG-AAAGCCU-GGGG--UGCCCCGC------------------------------GAGGGGAG----CCCUAGCACAG-GUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCG-CAACGAGCGCAACCCCCGCCGUUAGUUGCC-AGCGG------UUCGG-------------CCG--GG-CACUCUAACGGGACUGCCCGCG---AAA-GCGG-GAGGAAGGAGGGGACGACGUCUGGUCAGCAUGLCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCC-CACU-ACAAAGCGA---UGCCACCCGGCAACGGGGA-GCUAAUCGCAA-AAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCC--------------------GACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUC-AGCCAU-------------------------GCCGCGGUGAAUACGU-UCCCGGGCCUUGUACACAC?GλC?GU?ACGCCAUGGGAGCGGGC-UCU-ACCCGAAGUCGC-C-G-GGAG---CC---UACG----------------GG---CA-GGCGCCGAGGGU-AGGGCCCGUGACUGGGGCGA-AGU-CGΔAACAAGGUAG-CUGUACCGGZZGGUGCGG---CU-GGAUCCPPUCU----- |
| 1079 | rRNA | 16S | SSU | Escherichia coli | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA-----GAGU--UUGAUCAUGGCUCAGAUUGAACGCUACCGGCUAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCC--UGGG-GAGUAC-GGCCGCAAGGUUAAAACUCAAA-UGAAUUGACGGGGGCCCG-G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAUGGCUGUCGUCAGCUCGU--------------------------------------------GUUGUGAAAUGUUGACGUCAAGUCU-----------------UCCCGGGCCUUGUACACACCGλCCGU?ACACCAUGGGAGUGG----------------------------------------G-----------U-----------------------------UCAUGACUGGGGUGA-AGU-CGΔAACAAGGUAA-CCGUAGGLGZZCCUGCGG---UU-GGAUCA---------- |
| 1080 | rRNA | 16S | SSU | Thermus thermophilus | -----UGGAGAGUU-UGAU-CCUGGCUCAGGGUGAACGCU-GG-CGG--CGUG-CCUAAGACAUGCAAGUCGUGCG-GGC------------CGCGGGGUU----UUACUCC-G-UG------------------------------------------------------------------------------------------------------------------------------GUC--AG-CGGCGGA-CGGGUGAGUAACGCGUGGGU--GACCUACCCGGAAGAGG--GGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACC--CGC--CCC--UU----GGG--G-UG-U-G-UC-CA-AA-GGG--------------------------------------------------------CUUUG-----CCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCG-GUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGC-GCAAGCCUGACGGAGCGACGCCGCUUGGAG-GA-AGAAGCCC---UUCG--GGGUGUAAACUCCUGA-ACCCGGG-ACGAAA-CCCCCGAC-------------GAG-----GGGA--CUGACGGUACCGGGGUAA-UA-GC-GCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGG-CGUGUAGGCGGCCUGGGG-CGUCCC-AUGUGAAAGACCA-CGGCUCAACCG-UG-GGGGAGCGUGGGAUACGCUCA-GGCUA-GACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGA--UGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAG-GCGCGAAA-GCG-UGGGGAGCAAACCGG-AUUAGAUACCCGGGUAGUCCA-CGCCCUAAA-CGAU-GCGC--GC-UAGG-UCUC-UGGG----------------------------------UCU----CCUGGGGGCC-------GAA-GCUAACGCGUUAAGCGCGCCGCC--UGGG-GAGUAC-GGCCGCAAGGCUGAAACUCAAA-GGAAUUGACGGGGGCCCG-CAC-AAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUA-CCAGGCCUUGACAUGCUAGGG------------AACCCGGGUG-AAAGCCU-GGGG--UGCCCCGC------------------------------GAGGGGAG----CCCUAGCACAG-GUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCG-CAACGAGCGCAACCCCCGCCGUUAGUUGCC-AGCGG------UUCGG-------------CCG--GG-CACUCUAACGGGACUGCCCGCG---AAA-GCGG-GAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCC-CACU-ACAAAGCGA---UGCCACCCGGCAACGGGGA-GCUAAUCGCAA-AAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCC--------------------GACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUC-AGCCAU-------------------------GCCGCGGUGAAUACGU-UCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGC-UCU-ACCCGAAGUCGC-C-G-GGAG---CC---UACG----------------GG---CA-GGCGCCGAGGGU-AGGGCCCGUGACUGGGGCGA-AGU-CGUAACAAGGUAG-CUGUACCGGAAGGUGCGG---CU-GGAUCACPPUCU---- |
| 1083 | rRNA | 16S | SSU | Acinetobacter baumannii | -UAACUGAAGAGUU-UGAU-CAUGGCUCAGAUUGAACGCU-GG-CGG--CAGG-CUUAACACAUGCAAGUCGAGCG-GGG-----------GAAGGUAGCU-----UGCUAC-C-GG------------------------------------------------------------------------------------------------------------------------------ACC-UAG-CGGCGGA-CGGGUGAGUAAUGCUUAGGA---AUCUGCCUAUUAGUGG--GGGACAACAUCUCGAAAGGGAUGCUAAUACCGCAUACG-----------UCC--UACG--GGA--------------GA-AA-GCAGGGGA---------------------------------------------UCUUCGGACCU-----UGCGCUAAUAGAUGAGCCUAAGUCGGAUUAGCUAGUUGGUGGGGUAAAGGCCUACCAAGGCGACGAUCUGUAGCGG-GUCUGAGAGGAUGAUCCGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGGACAAUGGGG-GGAACCCUGAUCCAGCCAUGCCGCGUGUGU-GA-AGAAGGCC---UUAU--GGUUGUAAAGCACUUUAAGCGAGG-AGGAGG-CUACUCUAGUUAAUACCUAGGGAU-----AGU----GGACGUUACUCGCAGAAUAA-GC-ACCGGCUAACUCUGPGCCAGCAGCC7CGGUAAUACAGAGGGUGCGAGCGUUAAUCGGAUUUACUGGGCGUAAAGCG-UGCGUAGGCGGCUUAUUA-AGUCGG-AUGUGAAAUCCCC-GAGCUUAACUU-GG-GAAUUGCAUUCGAUACUGGUG-AGCUA-GAGUAUGGGAGAGGAUGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGA--UGGCGAAGGCAGCCAUCUGGCCUAAUACUGACGCUGAG-GUACGAAA-GCA-UGGGGAGCAAACAGG-AUUAGAUACCCUGGUAGUCCA-UGCCGUAAA-CGAU-GUCU--AC-UAGC-CGUU-GGGGCC--U----------------------------UUGA--GGCUUUAGUGGC-------GCA-GCUAACGCGAUAAGUAGACCGCC--UGGG-GAGUAC-GGUCGCAAGACUAAAACUCAAA-UGAAUUGACGGGGGCCCG-CAC-AAGCGGUGGAGCAUGUGGUUUAAUUCGAUL?AACGCGAAGAACCUUA-CCUGGCCUUGACAUA-CUAGA------------AACUUUUCAG-AGAUGGA-UUGG--UGCCUU----------------------------------CGGGAA----CCUAGAUACAG-GUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCG-CAACGAGCGCAACCCUUUUCCUUACUUGCC-AGCAU------UUCGG-------------AUG--GG-AACUUUAAGGAUACUGCCAGUGA--CAA-ACUG-GAGGAAGGCGGGGACGACGUCAAGUCAUCAUGLCCCUUACGGCCAGGGCUACACACGUGCUACAAUGGU-CGGU-ACAAAGGGU---UGCUACACAGCGAUGUGAU-GCUAAUCUCAA-AAAGCCGAUCGUAGUCCGGAUUGGAGUCUGCAACUC--------------------GACUCCAUGAAGUCGGAAUCGCUAGUAAUCGCGGAUC-AGA-AU-------------------------GCCGCGGUGAAUACGU-UCCCGGGCCUUGUACACACCGλCCGUCACACCAUGGGAGUUUGU-UGC-ACCAGAAGUAGC-U-A-GCCU-AACU---GCAA----------------AGAGGGC-GGUUACCACGGU-GUGGCCGAUGACUGGGGUGA-AGU-CGΔAACAAGGUAG-CCGUAGGGGZZCCUGCGG---CU-GGAUC----------- |
| 1084 | rRNA | 16S | SSU | Escherichia coli | -AAAUUGAAGAGUU-UGAU-CAUGGCUCAGAUUGAACGCU-GG-CGG--CAGG-CCUAACACAUGCAAGUCGAACG-GUAAC--------AGGAAGAAGCU-----UGCUUC-U-UUG---------------------------------------------------------------------------------------------------------------------------CUGAC-GAG-UGGCGGA-CGGGUGAGUAAUGUCUGGGA---AACUGCCUGAUGGAGG--GGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAAC-----------GUC--GCAA--GAC--------------CA-AA-GAGGGGGA---------------------------------------------CCUUCGGGCCU-----CUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUG-GUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGC-GCAAGCCUGAUGCAGCCAUGCCGCGUGUAU-GA-AGAAGGCC---UUCG--GGUUGUAAAGUACUUUCAGCGGGG-AGGAAG--GGAGUAAAGUU--AAUACCUUUG-----CUCA--UUGACGUUACCCGCAGAAGAA-GC-ACCGGCUAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCG-CACGCAGGCGGUUUGUUA-AGUCAG-AUGUGAAAUCCCC-GGGCUCAACCU-GG-GAACUGCAUCUGAUACUGGCA-AGCUU-GAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGG--UGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAG-GUGCGAAA-GCG-UGGGGAGCAAACAGG-AUUAGAUACCCUGGUAGUCCA-CGCCGUAAA-CGAU-GUCG--AC-UUGG-AGGU-UGUGCC--C----------------------------UUGA--GGCGUGGCUUCC-------GGA-GCUAACGCGUUAAGUCGACCGCC--UGGG-GAGUAC-GGCCGCAAGGUUAAAACUCAAA-UGAAUUGACGGGGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCUUGAACACACC--------CACCAUGGGAGUGGGU-UGC-AAAAGAAGUAGG-U-A-GCUU-AACC---UUCG----------------GGAGGGC-GCUUACCACUUU-GUGAUUCAUGACUGGGGUG------------AAGGUAA-CCGUAGGLGZZCCUGCGG---UU-GGAUCACCUCCU---- |
| 1085 | rRNA | 16S | SSU | Escherichia coli | -AAAUUGAAGAGUU-UGAU-CAUGGCUCAGAUUGAACGCU-GG-CGG--CAGG-CCUAACACAUGCAAGUCGAACG-GUAAC--------AGGAAGAAGCU-----UGCUUC-U-UUG---------------------------------------------------------------------------------------------------------------------------CUGAC-GAG-UGGCGGA-CGGGUGAGUAAUGUCUGGGA---AACUGCCUGAUGGAGG--GGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAAC-----------GUC--GCAA--GAC--------------CA-AA-GAGGGGGA---------------------------------------------CCUUCGGGCCU-----CUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUG-GUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGC-GCAAGCCUGAUGCAGCCAUGCCGCGUGUAU-GA-AGAAGGCC---UUCG--GGUUGUAAAGUACUUUCAGCGGGG-AGGAAG--GGAGUAAAGUU--AAUACCUUUG-----CUCA--UUGACGUUACCCGCAGAAGAA-GC-ACCGGCUAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCG-CACGCAGGCGGUUUGUUA-AGUCAG-AUGUGAAAUCCCC-GGGCUCAACCU-GG-GAACUGCAUCUGAUACUGGCA-AGCUU-GAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGG--UGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAG-GUGCGAAA-GCG-UGGGGAGCAAACAGG-AUUAGAUACCCUGGUAGUCCA-CGCCGUAAA-CGAU-GUCG--AC-UUGG-AGGU-UGUGCC--C----------------------------UUGA--GGCGUGGCUUCC-------GGA-GCUAACGCGUUAAGUCGACCGCC--UGGG-GAGUAC-GGCCGCAAGGUUAAAACUCAAA-UGAAUUGACGGGGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCUUGUACACC-----------ACCAUGGGAGUGGGU-UGC-AAAAGAAGUAGG-U-A-GCUU-AACC---UUCG----------------GGAGGGC-GCUUACCACUUU-GUGAUUCAUGACUGGGGU----------------G-AA-CCGUAGGLGZZCCUGCGG---UU-GGAUCACC-------- |
| 1086 | rRNA | 16S | SSU | Escherichia coli | -AAAUUGAAGAGUU-UGAU-CAUGGCUCAGAUUGAACGCU-GG-CGG--CAGG-CCUAACACAUGCAAGUCGAACG-GUAAC--------AGGAAGAAGCU-----UGCUUC-U-UUG---------------------------------------------------------------------------------------------------------------------------CUGAC-GAG-UGGCGGA-CGGGUGAGUAAUGUCUGGGA---AACUGCCUGAUGGAGG--GGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAAC-----------GUC--GCAA--GAC--------------CA-AA-GAGGGGGA---------------------------------------------CCUUCGGGCCU-----CUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUG-GUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGC-GCAAGCCUGAUGCAGCCAUGCCGCGUGUAU-GA-AGAAGGCC---UUCG--GGUUGUAAAGUACUUUCAGCGGGG-AGGAAG--GGAGUAAAGUU--AAUACCUUUG-----CUCA--UUGACGUUACCCGCAGAAGAA-GC-ACCGGCUAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCG-CACGCAGGCGGUUUGUUA-AGUCAG-AUGUGAAAUCCCC-GGGCUCAACCU-GG-GAACUGCAUCUGAUACUGGCA-AGCUU-GAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGG--UGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAG-GUGCGAAA-GCG-UGGGGAGCAAACAGG-AUUAGAUACCCUGGUAGUCCA-CGCCGUAAA-CGAU-GUCG--AC-UUGG-AGGU-UGUGCC--C----------------------------UUGA--GGCGUGGCUUCC-------GGA-GCUAACGCGUUAAGUCGACCGCC--UGGG-GAGUAC-GGCCGCAAGGUUAAAACUCAAA-UGAAUUGACGGGGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCUUGUACACACC-------ACACCAUGGGAGUGGGU-UGC-AAAAGAAGUAGG-U-A-GCUU-AACC---UUCG----------------GGAGGGC-GCUUACCACUUU-GUGAUUCAUGACUGGGGUGA-AGA--------AGGUAA-CCGUAGGLGZZCCUGCGG---UU-GGAUCACCUCCU---- |
| 1087 | rRNA | 16S | SSU | Escherichia coli | -AAAUUGAAGAGUU-UGAU-CAUGGCUCAGAUUGAACGCU-GG-CGG--CAGG-CCUAACACAUGCAAGUCGAACG-GUAAC--------AGGAAGAAGCU-----UGCUUC-U-UUG---------------------------------------------------------------------------------------------------------------------------CUGAC-GAG-UGGCGGA-CGGGUGAGUAAUGUCUGGGA---AACUGCCUGAUGGAGG--GGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAAC-----------GUC--GCAA--GAC--------------CA-AA-GAGGGGGA---------------------------------------------CCUUCGGGCCU-----CUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUG-GUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGC-GCAAGCCUGAUGCAGCCAUGCCGCGUGUAU-GA-AGAAGGCC---UUCG--GGUUGUAAAGUACUUUCAGCGGGG-AGGAAG--GGAGUAAAGUU--AAUACCUUUG-----CUCA--UUGACGUUACCCGCAGAAGAA-GC-ACCGGCUAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCG-CACGCAGGCGGUUUGUUA-AGUCAG-AUGUGAAAUCCCC-GGGCUCAACCU-GG-GAACUGCAUCUGAUACUGGCA-AGCUU-GAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGG--UGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAG-GUGCGAAA-GCG-UGGGGAGCAAACAGG-AUUAGAUACCCUGGUAGUCCA-CGCCGUAAA-CGAU-GUCG--AC-UUGG-AGGU-UGUGCC--C----------------------------UUGA--GGCGUGGCUUCC-------GGA-GCUAACGCGUUAAGUCGACCGCC--UGGG-GAGUAC-GGCCGCAAGGUUAAAACUCAAA-UGAAUUGACGGGGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCUUGUACACACC---CGU?ACACCAUGGGAGUGGGU-UGC-AAAAGAAGUAGG-U-A-GCUU-AACC---UUCG----------------GGAGGGC-GCUUACCACUUU-GUGAUUCAUGACUGGGGUGA-AGU-CG------ΔAUAA-CCGUAGGLGZZCCUGCGG---UU-GGAUCACC-------- |
| 1088 | rRNA | 16S | SSU | Escherichia coli | -AAAUUGAAGAGUU-UGAU-CAUGGCUCAGAUUGAACGCU-GG-CGG--CAGG-CCUAACACAUGCAAGUCGAACG-GUAAC--------AGGAAGAAGCU-----UGCUUC-U-UUG---------------------------------------------------------------------------------------------------------------------------CUGAC-GAG-UGGCGGA-CGGGUGAGUAAUGUCUGGGA---AACUGCCUGAUGGAGG--GGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAAC-----------GUC--GCAA--GAC--------------CA-AA-GAGGGGGA---------------------------------------------CCUUCGGGCCU-----CUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUG-GUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGC-GCAAGCCUGAUGCAGCCAUGCCGCGUGUAU-GA-AGAAGGCC---UUCG--GGUUGUAAAGUACUUUCAGCGGGG-AGGAAG--GGAGUAAAGUU--AAUACCUUUG-----CUCA--UUGACGUUACCCGCAGAAGAA-GC-ACCGGCUAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCG-CACGCAGGCGGUUUGUUA-AGUCAG-AUGUGAAAUCCCC-GGGCUCAACCU-GG-GAACUGCAUCUGAUACUGGCA-AGCUU-GAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGG--UGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAG-GUGCGAAA-GCG-UGGGGAGCAAACAGG-AUUAGAUACCCUGGUAGUCCA-CGCCGUAAA-CGAU-GUCG--AC-UUGG-AGGU-UGUGCC--C----------------------------UUGA--GGCGUGGCUUCC-------GGA-GCUAACGCGUUAAGUCGACCGCC--UGGG-GAGUAC-GGCCGCAAGGUUAAAACUCAAA-UGAAUUGACGGGGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCUUGUACACACCGλCCGU?ACACCAUGGGAGUGGGU-UGC-AAAAGAAGUAGG-U-A-GCUU-AACC---UUCG----------------GGAGGGC-GCUUACCACUUU-GUGAUUCAUGACUGGGGUGA-AGU-CGΔAACAAGGUAA-CCGUAGGLGZZCCUGCGG---UU-GGAUCA---------- |
| 1089 | rRNA | 16S | SSU | Escherichia coli | -AAAUUGAAGAGUU-UGAU-CAUGGCUCAGAUUGAACGCU-GG-CGG--CAGG-CCUAACACAUGCAAGUCGAACG-GUAAC--------AGGAAGAAGCU-----UGCUUC-U-UUG---------------------------------------------------------------------------------------------------------------------------CUGAC-GAG-UGGCGGA-CGGGUGAGUAAUGUCUGGGA---AACUGCCUGAUGGAGG--GGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAAC-----------GUC--GCAA--GAC--------------CA-AA-GAGGGGGA---------------------------------------------CCUUCGGGCCU-----CUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUG-GUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGC-GCAAGCCUGAUGCAGCCAUGCCGCGUGUAU-GA-AGAAGGCC---UUCG--GGUUGUAAAGUACUUUCAGCGGGG-AGGAAG--GGAGUAAAGUU--AAUACCUUUG-----CUCA--UUGACGUUACCCGCAGAAGAA-GC-ACCGGCUAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCG-CACGCAGGCGGUUUGUUA-AGUCAG-AUGUGAAAUCCCC-GGGCUCAACCU-GG-GAACUGCAUCUGAUACUGGCA-AGCUU-GAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGG--UGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAG-GUGCGAAA-GCG-UGGGGAGCAAACAGG-AUUAGAUACCCUGGUAGUCCA-CGCCGUAAA-CGAU-GUCG--AC-UUGG-AGGU-UGUGCC--C----------------------------UUGA--GGCGUGGCUUCC-------GGA-GCUAACGCGUUAAGUCGACCGCC--UGGG-GAGUAC-GGCCGCAAGGUUAAAACUCAAA-UGAAU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGAC----------------GGGGG---------------------------------CGCC--------------------------------------------------------------U----------UG--------------------------------------------------------AGGUAA-CCGUAGGLGZZCCUGCGG---UU-GGAUCACCUCCU---- |
| 1090 | rRNA | 16S | SSU | Escherichia coli | -AAAUUGAAGAGUU-UGAU-CAUGGCUCAGAUUGAACGCU-GG-CGG--CAGG-CCUAACACAUGCAAGUCGAACG-GUAAC--------AGGAAGAAGCU-----UGCUUC-U-UUG---------------------------------------------------------------------------------------------------------------------------CUGAC-GAG-UGGCGGA-CGGGUGAGUAAUGUCUGGGA---AACUGCCUGAUGGAGG--GGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAAC-----------GUC--GCAA--GAC--------------CA-AA-GAGGGGGA---------------------------------------------CCUUCGGGCCU-----CUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUG-GUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGC-GCAAGCCUGAUGCAGCCAUGCCGCGUGUAU-GA-AGAAGGCC---UUCG--GGUUGUAAAGUACUUUCAGCGGGG-AGGAAG--GGAGUAAAGUU--AAUACCUUUG-----CUCA--UUGACGUUACCCGCAGAAGAA-GC-ACCGGCUAACUCCGPGCCAGCAGCC7CGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCG-CACGCAGGCGGUUUGUUA-AGUCAG-AUGUGAAAUCCCC-GGGCUCAACCU-GG-GAACUGCAUCUGAUACUGGCA-AGCUU-GAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGG--UGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAG-GUGCGAAA-GCG-UGGGGAGCAAACAGG-AUUAGAUACCCUGGUAGUCCA-CGCCGUAAA-CGAU-GUCG--AC-UUGG-AGGU-UGUGCC--C----------------------------UUGA--GGCGUGGCUUCC-------GGA-GCUAACGCGUUAAGUCGACCGCC--UGGG-GAGUAC-GGCCGCAAGGUUAAAACUCAAA-UGAAUUGACGGGGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCUUGUACACACCGλCCGU?ACACCAUGGGAGUGGGU-UGC-AAAAGAAGUAGG-U-A-GCUU-AACC---UUCG----------------GGAGGGC-GCUUACCACUUU-GUGAUUCAUGACUGGGGUGA-AGU-CGΔAACAAGGUAA-CCGUAGGLGZZCCUGCGG---UU-GGAUCA---------- |
| 1091 | rRNA | 16S | SSU | Escherichia coli | -AAAUUGAAGAGUU-UGAU-CAUGGCUCAGAUUGAACGCU-GG-CGG--CAGG-CCUAACACAUGCAAGUCGAACG-GUAAC--------AGGAAGAAGCU-----UGCUUC-U-UUG---------------------------------------------------------------------------------------------------------------------------CUGAC-GAG-UGGCGGA-CGGGUGAGUAAUGUCUGGGA---AACUGCCUGAUGGAGG--GGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAAC-----------GUC--GCAA--GAC--------------CA-AA-GAGGGGGA---------------------------------------------CCUUCGGGCCU-----CUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUG-GUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGC-GCAAGCCUGAUGCAGCCAUGCCGCGUGUAU-GA-AGAAGGCC---UUCG--GGUUGUAAAGUACUUUCAGCGGGG-AGGAAG--GGAGUAAAGUU--AAUACCUUUG-----CUCA--UUGACGUUACCCGCAGAAGAA-GC-ACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCG-CACGCAGGCGGUUUGUUA-AGUCAG-AUGUGAAAUCCCC-GGGCUCAACCU-GG-GAACUGCAUCUGAUACUGGCA-AGCUU-GAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGG--UGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAG-GUGCGAAA-GCG-UGGGGAGCAAACAGG-AUUAGAUACCCUGGUAGUCCA-CGCCGUAAA-CGAU-GUCG--AC-UUGG-AGGU-UGUGCC--C----------------------------UUGA--GGCGUGGCUUCC-------GGA-GCUAACGCGUUAAGUCGACCGCC--UGGG-GAGUAC-GGCCGCAAGGUUAAAACUCAAA-UGAAUUG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGGGGCGCCUU----------------------------------------------------------GAAA-CCGUAGGLGZZCCUGCGG---UU-GGAUCACCUCCU---- |
| 1092 | rRNA | 16S | SSU | Escherichia coli | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCG-CAC-AAGCGGUGGAGCAUGUGGUUUAAUUCGAUL?AACGCGAAGAACCUUA-CCUGGUCUUGACAUC-CACGG------------AAGUUUUCAG-AGAUGAG-AAUG--UGCCUU----------------------------------CGGGAA----CCGUGAGACAG-GUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCG-CAACGAGCGCAACCCUUAUCCUUUGUUGCC-AGCGG------UCCGG-------------CCG--GG-AACUCAAAGGAGACUGCCAGUGA--UAA-ACUG-GAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGLCCCUUACGACCAGGGCUACACACGUGCUACAAUGGC-GCAU-ACAAAGAGA---AGCGACCUCGCGAGAGCAA-GCGGACCUCAU-AAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUC--------------------GACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUC-AGA-AU-------------------------GCCACGGUGAAUACGU-UCCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 1093 | rRNA | 16S | SSU | Escherichia coli | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCG-CAC-AAGCGGUGGAGCAUGUGGUUUAAUUCGAUL?AACGCGAAGAACCUUA-CCUGGUCUUGACAUC-CACGG------------AAGUUUUCAG-AGAUGAG-AAUG--UGCCUU----------------------------------CGGGAA----CCGUGAGACAG-GUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCG-CAACGAGCGCAACCCUUAUCCUUUGUUGCC-AGCGG------UCCGG-------------CCG--GG-AACUCAAAGGAGACUGCCAGUGA--UAA-ACUG-GAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGLCCCUUACGACCAGGGCUACACACGUGCUACAAUGGC-GCAU-ACAAAGAGA---AGCGACCUCGCGAGAGCAA-GCGGACCUCAU-AAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUC--------------------GACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUC-AGA-AU-------------------------GCCACGGUGAAUACGU-UCCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 1094 | rRNA | 16S | SSU | Escherichia coli | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCG-CAC-AAGCGGUGGAGCAUGUGGUUUAAUUCGAUL?AACGCGAAGAACCUUA-CCUGGUCUUGACAUC-CACGG------------AAGUUUUCAG-AGAUGAG-AAUG--UGCCUU----------------------------------CGGGAA----CCGUGAGACAG-GUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCG-CAACGAGCGCAACCCUUAUCCUUUGUUGCC-AGCGG------UCCGG-------------CCG--GG-AACUCAAAGGAGACUGCCAGUGA--UAA-ACUG-GAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGLCCCUUACGACCAGGGCUACACACGUGCUACAAUGGC-GCAU-ACAAAGAGA---AGCGACCUCGCGAGAGCAA-GCGGACCUCAU-AAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUC--------------------GACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUC-AGA-AU-------------------------GCCACGGUGAAUACGU-UCCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 1095 | rRNA | 16S | SSU | Escherichia coli | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCG-CAC-AAGCGGUGGAGCAUGUGGUUUAAUUCGAUL?AACGCGAAGAACCUUA-CCUGGUCUUGACAUC-CACGG------------AAGUUUUCAG-AGAUGAG-AAUG--UGCCUU----------------------------------CGGGAA----CCGUGAGACAG-GUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCG-CAACGAGCGCAACCCUUAUCCUUUGUUGCC-AGCGG------UCCGG-------------CCG--GG-AACUCAAAGGAGACUGCCAGUGA--UAA-ACUG-GAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGLCCCUUACGACCAGGGCUACACACGUGCUACAAUGGC-GCAU-ACAAAGAGA---AGCGACCUCGCGAGAGCAA-GCGGACCUCAU-AAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUC--------------------GACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUC-AGA-AU-------------------------GCCACGGUGAAUACGU-UCCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 1096 | rRNA | 16S | SSU | Escherichia coli | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCG-CAC-AAGCGGUGGAGCAUGUGGUUUAAUUCGAUL?AACGCGAAGAACCUUA-CCUGGUCUUGACAUC-CACGG------------AAGUUUUCAG-AGAUGAG-AAUG--UGCCUU----------------------------------CGGGAA----CCGUGAGACAG-GUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCG-CAACGAGCGCAACCCUUAUCCUUUGUUGCC-AGCGG------UCCGG-------------CCG--GG-AACUCAAAGGAGACUGCCAGUGA--UAA-ACUG-GAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGLCCCUUACGACCAGGGCUACACACGUGCUACAAUGGC-GCAU-ACAAAGAGA---AGCGACCUCGCGAGAGCAA-GCGGACCUCAU-AAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUC--------------------GACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUC-AGA-AU-------------------------GCCACGGUGAAUACGU-UCCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 1097 | rRNA | 16S | SSU | Escherichia coli | |
| 1098 | rRNA | 16S | SSU | Escherichia coli | |
| 1099 | rRNA | 16S | SSU | Escherichia coli | |
| 1107 | rRNA | 16S | SSU | Thermus thermophilus | |
| 1108 | rRNA | 16S | SSU | Thermus thermophilus | |
| 1109 | rRNA | 16S | SSU | Thermus thermophilus | |
| 1110 | rRNA | 16S | SSU | Thermus thermophilus | |
| 1111 | rRNA | 16S | SSU | Thermus thermophilus | |
| 1112 | rRNA | 16S | SSU | Thermus thermophilus | |
| 1113 | rRNA | 16S | SSU | Thermus thermophilus | |
| 1114 | rRNA | 16S | SSU | Thermus thermophilus | |
| 1115 | rRNA | 16S | SSU | Thermus thermophilus |
In our latest update, we've incorporated new functionalities in the user interface to enhance data accessibility. Now, users have the option to download aligned sequences in FASTA format directly. Utilizing the available drop-down menus, you can not only view specific sequences but also filter the ones you wish to download. Check boxes allow you to choose between downloading sequences with or without modifications. Unlike the RNA sequences section, where filters are more dynamic, the alignment interface categorizes sequences based on Rfam families, leaving only the organism filter as a variable drop-down option.