General Data

RNA Type	rRNA
SOTerm	S0:0000407
Original Source	6YBW_A
Sequence (UNICHARACTER ENCODING)	UACCUGGUUGAUCCUGCCAGUAGCAUʍUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCUGAGUACGCACGGCCGGUACAGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUGGUJCCPUJGGUCGCUCGCUCCUACUUGGAUAACUGUGGUAʍUUCUAGʍGCUAAUABAUGCCGACGGGCGCUGACCCCCUUCGCGGGGGGGAUGCGUGCAUUUAUCAGUGGUGACUCUAGAUAACCUCGGGCCGAUCGCACGCCCCCCGUGGCGGCGACGACCCAUUCGAACGUCUGCCCUAUCAACUUUCGAUGGUAGUCGCCGUGCCUACCAUGGUGACCACGGGUGACGGGGAAUCAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCʍAAUUACCCACUCCCGACCCGGGGA#GUAGUGABGAAAAAUAACAAUACAGGACUCUUUCGAGGCCCUGUAAUUGGAAUGAGUCCACUUUAAAUCCUUUAACGAGGAUCCAUUGGAGGGCAAGUCUGGPGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUA#CGUAUAUUAAAGUUGCUGCAGUUʍAAAAGCUCGUAGUU#GAUCUUGGGAGCGGCCCCGCCCCUCUCGGCGGCCCGAAGCGUUUACUUUGAAAAAATUAGAGUGPPCAAAGCAGGCCCGAGCCGCCUGGAUACCGCAGCUAGGAAUAAUGGAAUAGGACCGCGGUUCUAUUUUGUUGGUUUUCGGAACUGAGGCCAUGAUUAAGAGGGACGGCCGGGGGCAUUCGUAUUGCGCCGCUAGAGGUGAAAUUCUUGGACCGGCGCAAGACGGACCAGAGCGAAAGCAUUUGCCAAGAAUGUUUUCAUUAAUCAAGAʍCGAAAGUCGGAGGUUCGAAGACGAUCAGAUACCGUCGUAGUUCCGACCAPAAACGAUGCCGACCGGCGAUGCGGCGGCGUUAUUCCCAUGACCCGCCGGGCAGCUUCCGGGAAACCAAAGUCUUUGGGUUCCGGGGGGAGUAUGGUUGCAAAGCUGAAACUUAAAGGAACCGBCCGUCGCUACUACCGAUUGGAUGGUUUAGUGAGGCCCUCGGAUCGGCCCCGCCGGGGGCCCUGGCGGAGCGCUGAGAAGACGGUCGAACUUGACUAUCUAGAGGAAGUAAAAGUCGΔAЖCAAGGUUUCCGUAGGUGZZCCUGCGGAAGGAUCAUUA
Sequence (SHORT NAMES ENCODING)	UACCUGGUUGAUCCUGCCAGUAGCAUpAmUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCUGAGUACGCACGGCCGGUACAGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUGGUpUmCCpYUpUmGGUCGCUCGCUCCUACUUGGAUAACUGUGGUApAmUUCUAGpAmGCUAAUApCmAUGCCGACGGGCGCUGACCCCCUUCGCGGGGGGGAUGCGUGCAUUUAUCAGUGGUGACUCUAGAUAACCUCGGGCCGAUCGCACGCCCCCCGUGGCGGCGACGACCCAUUCGAACGUCUGCCCUAUCAACUUUCGAUGGUAGUCGCCGUGCCUACCAUGGUGACCACGGGUGACGGGGAAUCAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCpAmAAUUACCCACUCCCGACCCGGGGApGmGUAGUGApCmGAAAAAUAACAAUACAGGACUCUUUCGAGGCCCUGUAAUUGGAAUGAGUCCACUUUAAAUCCUUUAACGAGGAUCCAUUGGAGGGCAAGUCUGGpYGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUApGmCGUAUAUUAAAGUUGCUGCAGUUpAmAAAAGCUCGUAGUUpGmGAUCUUGGGAGCGGCCCCGCCCCUCUCGGCGGCCCGAAGCGUUUACUUUGAAAAAApm5UUAGAGUGpYpYCAAAGCAGGCCCGAGCCGCCUGGAUACCGCAGCUAGGAAUAAUGGAAUAGGACCGCGGUUCUAUUUUGUUGGUUUUCGGAACUGAGGCCAUGAUUAAGAGGGACGGCCGGGGGCAUUCGUAUUGCGCCGCUAGAGGUGAAAUUCUUGGACCGGCGCAAGACGGACCAGAGCGAAAGCAUUUGCCAAGAAUGUUUUCAUUAAUCAAGApAmCGAAAGUCGGAGGUUCGAAGACGAUCAGAUACCGUCGUAGUUCCGACCApYAAACGAUGCCGACCGGCGAUGCGGCGGCGUUAUUCCCAUGACCCGCCGGGCAGCUUCCGGGAAACCAAAGUCUUUGGGUUCCGGGGGGAGUAUGGUUGCAAAGCUGAAACUUAAAGGAACCGpCmCCGUCGCUACUACCGAUUGGAUGGUUUAGUGAGGCCCUCGGAUCGGCCCCGCCGGGGGCCCUGGCGGAGCGCUGAGAAGACGGUCGAACUUGACUAUCUAGAGGAAGUAAAAGUCGpnm5ges2UApm6ACAAGGUUUCCGUAGGUGpYmpYmCCUGCGGAAGGAUCAUUA
Sequence (MODOMICS CODE ENCODING)	UACCUGGUUGAUCCUGCCAGUAGCAU2000090551AUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCUGAGUACGCACGGCCGGUACAGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUGGU2000090551UCC2000009551UU2000090551UGGUCGCUCGCUCCUACUUGGAUAACUGUGGUA2000090551AUUCUAG2000090551AGCUAAUA2000090551CAUGCCGACGGGCGCUGACCCCCUUCGCGGGGGGGAUGCGUGCAUUUAUCAGUGGUGACUCUAGAUAACCUCGGGCCGAUCGCACGCCCCCCGUGGCGGCGACGACCCAUUCGAACGUCUGCCCUAUCAACUUUCGAUGGUAGUCGCCGUGCCUACCAUGGUGACCACGGGUGACGGGGAAUCAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGC2000090551AAAUUACCCACUCCCGACCCGGGGA2000090551GGUAGUGA2000090551CGAAAAAUAACAAUACAGGACUCUUUCGAGGCCCUGUAAUUGGAAUGAGUCCACUUUAAAUCCUUUAACGAGGAUCCAUUGGAGGGCAAGUCUGG2000009551UGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUA2000090551GCGUAUAUUAAAGUUGCUGCAGUU2000090551AAAAAGCUCGUAGUU2000090551GGAUCUUGGGAGCGGCCCCGCCCCUCUCGGCGGCCCGAAGCGUUUACUUUGAAAAAA2000005551UUAGAGUG2000009551U2000009551UCAAAGCAGGCCCGAGCCGCCUGGAUACCGCAGCUAGGAAUAAUGGAAUAGGACCGCGGUUCUAUUUUGUUGGUUUUCGGAACUGAGGCCAUGAUUAAGAGGGACGGCCGGGGGCAUUCGUAUUGCGCCGCUAGAGGUGAAAUUCUUGGACCGGCGCAAGACGGACCAGAGCGAAAGCAUUUGCCAAGAAUGUUUUCAUUAAUCAAGA2000090551ACGAAAGUCGGAGGUUCGAAGACGAUCAGAUACCGUCGUAGUUCCGACCA2000009551UAAACGAUGCCGACCGGCGAUGCGGCGGCGUUAUUCCCAUGACCCGCCGGGCAGCUUCCGGGAAACCAAAGUCUUUGGGUUCCGGGGGGAGUAUGGUUGCAAAGCUGAAACUUAAAGGAACCG2000090551CCCGUCGCUACUACCGAUUGGAUGGUUUAGUGAGGCCCUCGGAUCGGCCCCGCCGGGGGCCCUGGCGGAGCGCUGAGAAGACGGUCGAACUUGACUAUCUAGAGGAAGUAAAAGUCG2021510551UA2000006551ACAAGGUUUCCGUAGGUG2000909551U2000909551UCCUGCGGAAGGAUCAUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the alignment	28	117	120	122	157	164	172	436	461	469	563	595	619	634	758	766	767	974	1024	1639	1761	1763	1781	1782
Position in the sequence	27	116	119	121	154	161	169	418	443	451	546	578	602	617	674	682	683	891	941	1064	1181	1183	1201	1202
Modification positions	pAm	pUm	pY	pUm	pAm	pAm	pCm	pAm	pGm	pCm	pY	pGm	pAm	pGm	pm5U	pY	pY	pAm	pY	pCm	pnm5ges2U	pm6A	Ym	Ym
Level of Experimental Evidence	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
Level of Experimental Reliability	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
Source	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB