General Data

RNA Type	rRNA
SOTerm	S0:0000407
Original Source	6ZXH_2
Sequence (UNICHARACTER ENCODING)	UACCUGGUUGAUCCUGCCAGUAGCAUʍUGCUUGPCPCAAAGAUUAAGCCAUGCAUGUCUAAGUACGCACGGCUACAGUGAAACUGCGAAPGGCUCʍUUAAAPCAGPUAUGGUJCCPUJGGUCGCUCGUACUUGGAUAACUGUGGUAʍUUCUAGʍGCUAAJABAUGCCGACGGGCGCUGACCCCCUUCGCGGGGGGGAUGCGUGCAPUUAUCAGUGGUGACUCUAGAUAACCUCGGGCCGAUCGCACGCGCGGCGACGACCCAUUCGAACGUCJGCCCUAUCAACUUUCGAUGGUAGUCGCCGUGCCUACCAUGGUGACCACGGGPGACGGGGAAUCAGGGUUCGAUJCCGGAGA#GGAGCCUGAGAAACGGCUACCACAUBCAAGGʍAGGCAGCAGGCGCGCʍAAUUACCCACUCCCGACCCGGGGA#GUʍGUGABGAAAAAUAACAAUACAGGACUCUUUCGAGGCCCUGUAAUUGGAAUGAGUCCACUPUAAʍUCCUUUAACGAGGAUCCAUUGGAG#GCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUA#CGUAPAPUAAAGUUGCUGCAGUUʍAAAAGCUCGUAGPU#GAPCUCUCUCGGCCGAAGCGUUUACUUUGAAAAAAPPAGAGUGPUCAAAGCAGGCCGCCUGGAUACCGCAGCUAGGAAUAAU#GAAUAGGACCGCGGUUCUCGGAACUGAGGCCAUGAUUAAGAGGGACGGCCGGGGGCAUUCGUAUUGCGCCGCUAGAGGUGAAAUPCUUGGACCGGCGCAAGACGGACCAGAGCGAAAGCAUUPGCCAAGAAUGUUUUCAUUAAUCAAGAʍCGAAAGUCGGAGGPPCGAAGACGAPCAGAUACCGUCGUAGUUCCGACCAPAAACGAUGCCGACCGGCGAUGCGGCGGCGUUAUAUGACCCGCCGGGCAGCUUCCGGGAAACCAAAGUCUUUGGGUUCCGGGGGGAGUAPGGPUGCAAAGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCPGCGGCPUAAUUPGACNCAACACGGGAAACCUCACCCGGCBCGGACACGGACAGGAJUGACAGAUUGAUAGCUCUUUCUCGAUUCCGUGGGUGGJG#UGCAUGGCMGUUCUUAGUPGGUGGAGCGAUUUGUCUGGPUAAUUCCGAUAACGAʍCGAGACUBUGGCAUGCUAACUAGUUACGCGACCCCCGGUCGGCGUAACUJCUPAGAGGGACAAGUGGCGUUCAGCCACCCGAGAUUGAGCAAUAACA#GUCUGUGAUGCCCUUAGAUGUCCGGGGCUGCACGCGCGCUACACUGACUGGCUCAGCGUGUGCCUACCCUACGCCGGCAGGCGCGGGUAACCCGUUGAACCCCAUUCGUGAUGGGGAUCGGGGAUUGCAAUUAUPCCCCAUGAACGAG7AAUPCCCAGUAAGUGCGGGUCAUAAGCUUGCGUUGAUUʍAGUCCCUGCCCUUPGUACACACCGBCCGUCGCUACUACCGAUUGGAUGGUUUAGUGAGGCCCUCGGAUCGGCCCCGCCGGGGUGCCCUGGCGGAGCGCUGAGAAGACGGUCGAACUUGACUAUCUAGAGGAAGUAAAAGUCGUAЖCAAGGUUUCMGUAGGUAZZCCUGCGGAAGGAUCAUUA
Sequence (SHORT NAMES ENCODING)	UACCUGGUUGAUCCUGCCAGUAGCAUpAmUGCUUGpYCpYCAAAGAUUAAGCCAUGCAUGUCUAAGUACGCACGGCUACAGUGAAACUGCGAApYGGCUCpAmUUAAApYCAGpYUAUGGUpUmCCpYUpUmGGUCGCUCGUACUUGGAUAACUGUGGUApAmUUCUAGpAmGCUAApUmApCmAUGCCGACGGGCGCUGACCCCCUUCGCGGGGGGGAUGCGUGCApYUUAUCAGUGGUGACUCUAGAUAACCUCGGGCCGAUCGCACGCGCGGCGACGACCCAUUCGAACGUCpUmGCCCUAUCAACUUUCGAUGGUAGUCGCCGUGCCUACCAUGGUGACCACGGGpYGACGGGGAAUCAGGGUUCGAUpUmCCGGAGApGmGGAGCCUGAGAAACGGCUACCACAUpCmCAAGGpAmAGGCAGCAGGCGCGCpAmAAUUACCCACUCCCGACCCGGGGApGmGUpAmGUGApCmGAAAAAUAACAAUACAGGACUCUUUCGAGGCCCUGUAAUUGGAAUGAGUCCACUpYUAApAmUCCUUUAACGAGGAUCCAUUGGAGpGmGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUApGmCGUApYApYUAAAGUUGCUGCAGUUpAmAAAAGCUCGUAGpYUpGmGApYCUCUCUCGGCCGAAGCGUUUACUUUGAAAAAApYpYAGAGUGpYUCAAAGCAGGCCGCCUGGAUACCGCAGCUAGGAAUAAUpGmGAAUAGGACCGCGGUUCUCGGAACUGAGGCCAUGAUUAAGAGGGACGGCCGGGGGCAUUCGUAUUGCGCCGCUAGAGGUGAAAUpYCUUGGACCGGCGCAAGACGGACCAGAGCGAAAGCAUUpYGCCAAGAAUGUUUUCAUUAAUCAAGApAmCGAAAGUCGGAGGpYpYCGAAGACGApYCAGAUACCGUCGUAGUUCCGACCApYAAACGAUGCCGACCGGCGAUGCGGCGGCGUUAUAUGACCCGCCGGGCAGCUUCCGGGAAACCAAAGUCUUUGGGUUCCGGGGGGAGUApYGGpYUGCAAAGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCpYGCGGCpYUAAUUpYGACxUCAACACGGGAAACCUCACCCGGCpCmCGGACACGGACAGGApUmUGACAGAUUGAUAGCUCUUUCUCGAUUCCGUGGGUGGpUmGpGmUGCAUGGCpac4CGUUCUUAGUpYGGUGGAGCGAUUUGUCUGGpYUAAUUCCGAUAACGApAmCGAGACUpCmUGGCAUGCUAACUAGUUACGCGACCCCCGGUCGGCGUAACUpUmCUpYAGAGGGACAAGUGGCGUUCAGCCACCCGAGAUUGAGCAAUAACApGmGUCUGUGAUGCCCUUAGAUGUCCGGGGCUGCACGCGCGCUACACUGACUGGCUCAGCGUGUGCCUACCCUACGCCGGCAGGCGCGGGUAACCCGUUGAACCCCAUUCGUGAUGGGGAUCGGGGAUUGCAAUUAUpYCCCCAUGAACGAGpm7GAAUpYCCCAGUAAGUGCGGGUCAUAAGCUUGCGUUGAUUpAmAGUCCCUGCCCUUpYGUACACACCGpCmCCGUCGCUACUACCGAUUGGAUGGUUUAGUGAGGCCCUCGGAUCGGCCCCGCCGGGGUGCCCUGGCGGAGCGCUGAGAAGACGGUCGAACUUGACUAUCUAGAGGAAGUAAAAGUCGUApm6ACAAGGUUUCpac4CGUAGGUApYmpYmCCUGCGGAAGGAUCAUUA
Sequence (MODOMICS CODE ENCODING)	UACCUGGUUGAUCCUGCCAGUAGCAU2000090551AUGCUUG2000009551UC2000009551UCAAAGAUUAAGCCAUGCAUGUCUAAGUACGCACGGCUACAGUGAAACUGCGAA2000009551UGGCUC2000090551AUUAAA2000009551UCAG2000009551UUAUGGU2000090551UCC2000009551UU2000090551UGGUCGCUCGUACUUGGAUAACUGUGGUA2000090551AUUCUAG2000090551AGCUAA2000090551UA2000090551CAUGCCGACGGGCGCUGACCCCCUUCGCGGGGGGGAUGCGUGCA2000009551UUUAUCAGUGGUGACUCUAGAUAACCUCGGGCCGAUCGCACGCGCGGCGACGACCCAUUCGAACGUC2000090551UGCCCUAUCAACUUUCGAUGGUAGUCGCCGUGCCUACCAUGGUGACCACGGG2000009551UGACGGGGAAUCAGGGUUCGAU2000090551UCCGGAGA2000090551GGGAGCCUGAGAAACGGCUACCACAU2000090551CCAAGG2000090551AAGGCAGCAGGCGCGC2000090551AAAUUACCCACUCCCGACCCGGGGA2000090551GGU2000090551AGUGA2000090551CGAAAAAUAACAAUACAGGACUCUUUCGAGGCCCUGUAAUUGGAAUGAGUCCACU2000009551UUAA2000090551AUCCUUUAACGAGGAUCCAUUGGAG2000090551GGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUA2000090551GCGUA2000009551UA2000009551UUAAAGUUGCUGCAGUU2000090551AAAAAGCUCGUAG2000009551UU2000090551GGA2000009551UCUCUCUCGGCCGAAGCGUUUACUUUGAAAAAA2000009551U2000009551UAGAGUG2000009551UUCAAAGCAGGCCGCCUGGAUACCGCAGCUAGGAAUAAU2000090551GGAAUAGGACCGCGGUUCUCGGAACUGAGGCCAUGAUUAAGAGGGACGGCCGGGGGCAUUCGUAUUGCGCCGCUAGAGGUGAAAU2000009551UCUUGGACCGGCGCAAGACGGACCAGAGCGAAAGCAUU2000009551UGCCAAGAAUGUUUUCAUUAAUCAAGA2000090551ACGAAAGUCGGAGG2000009551U2000009551UCGAAGACGA2000009551UCAGAUACCGUCGUAGUUCCGACCA2000009551UAAACGAUGCCGACCGGCGAUGCGGCGGCGUUAUAUGACCCGCCGGGCAGCUUCCGGGAAACCAAAGUCUUUGGGUUCCGGGGGGAGUA2000009551UGG2000009551UUGCAAAGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCC2000009551UGCGGC2000009551UUAAUU2000009551UGAC2000000999UCAACACGGGAAACCUCACCCGGC2000090551CCGGACACGGACAGGA2000090551UUGACAGAUUGAUAGCUCUUUCUCGAUUCCGUGGGUGG2000090551UG2000090551GUGCAUGGC2000042551CGUUCUUAGU2000009551UGGUGGAGCGAUUUGUCUGG2000009551UUAAUUCCGAUAACGA2000090551ACGAGACU2000090551CUGGCAUGCUAACUAGUUACGCGACCCCCGGUCGGCGUAACU2000090551UCU2000009551UAGAGGGACAAGUGGCGUUCAGCCACCCGAGAUUGAGCAAUAACA2000090551GGUCUGUGAUGCCCUUAGAUGUCCGGGGCUGCACGCGCGCUACACUGACUGGCUCAGCGUGUGCCUACCCUACGCCGGCAGGCGCGGGUAACCCGUUGAACCCCAUUCGUGAUGGGGAUCGGGGAUUGCAAUUAU2000009551UCCCCAUGAACGAG2000007551GAAU2000009551UCCCAGUAAGUGCGGGUCAUAAGCUUGCGUUGAUU2000090551AAGUCCCUGCCCUU2000009551UGUACACACCG2000090551CCCGUCGCUACUACCGAUUGGAUGGUUUAGUGAGGCCCUCGGAUCGGCCCCGCCGGGGUGCCCUGGCGGAGCGCUGAGAAGACGGUCGAACUUGACUAUCUAGAGGAAGUAAAAGUCGUA2000006551ACAAGGUUUC2000042551CGUAGGUA2000909551U2000909551UCCUGCGGAAGGAUCAUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the alignment	28	35	37	94	100	106	110	117	120	122	157	164	170	172	207	306	358	380	388	414	420	436	461	464	469	523	527	552	595	600	602	619	632	634	637	758	759	766	809	909	947	974	988	989	999	1024	1117	1120	1175	1181	1187	1191	1215	1231	1269	1271	1280	1290	1310	1326	1334	1378	1381	1428	1561	1575	1579	1614	1628	1639	1763	1773	1781	1782
Position in the sequence	27	34	36	90	96	102	106	113	116	118	147	154	160	162	206	273	325	347	355	381	387	403	428	431	436	491	495	520	563	568	570	587	600	602	605	638	639	646	685	770	808	835	849	850	860	885	974	977	1032	1038	1044	1048	1072	1088	1126	1128	1137	1147	1167	1183	1191	1233	1236	1281	1416	1430	1434	1469	1483	1494	1614	1624	1632	1633
Modification positions	pAm	pY	pY	pY	pAm	pY	pY	pUm	pY	pUm	pAm	pAm	pUm	pCm	pY	pUm	pY	pUm	pGm	pCm	pAm	pAm	pGm	pAm	pCm	pY	pAm	pGm	pGm	pY	pY	pAm	pY	pGm	pY	pY	pY	pY	pGm	pY	pY	pAm	pY	pY	pY	pY	pY	pY	pY	pY	pY	xU	pCm	pUm	pUm	pGm	pac4C	pY	pY	pAm	pCm	pUm	pY	pGm	pY	pm7G	pY	pAm	pY	pCm	pm6A	pac4C	Ym	Ym
Level of Experimental Evidence	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
Level of Experimental Reliability	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
Source	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB	RCSB