RNA Type | tRNA |
---|---|
SOTerm | None |
Original Source | 1YFG_A |
Secondary Structure | (((((((..((((....[..)))).(((((.......))))).....(((((..]....)))))))))))).... |
Sequence (UNICHARACTER ENCODING) | AGCGCCGUKLCGCAGDGGAAGCGCRCAGGGCUCAU6ACCCUGAU7D??UCGGAUCGѢAACCGʩGCGGCGCUACCA |
Sequence (SHORT NAMES ENCODING) | AGCGCCGUpm1Gpm2GCGCAGpDGGAAGCGCpm2,2GCAGGGCUCAUpt6AACCCUGAUpm7GpDpm5Cpm5CUCGGAUCGpm1AAACCGpAr(p)GCGGCGCUACCA |
Sequence (MODOMICS CODE ENCODING) | AGCGCCGU2000001551G2000002551GCGCAG2000008551UGGAAGCGC2000022551GCAGGGCUCAU2000062551AACCCUGAU2000007551G2000008551U2000005551C2000005551CUCGGAUCG2000001551AAACCG2900255551AGCGGCGCUACCA |
Consensus Secondary Structure | .(((((((..((((......[....)))).(((((.......)))))........................(((((..]....)))))))))))).... |
Alignment with Modification | -AGCGCCGUKLCGCAGD--GGA--AGCGCRCAGGGCUCAU6ACCCUGAU7D?-------------------?UCGGAUCGѢAACCGʩGCGGCGCUACCA |
Method Classification | Score |
---|---|
Multiple direct experimental evidence | 1 |
Direct experimental evidence | 2 |
Inferred based on indirect experimental evidence | 3 |
Predicted computationally | 4 |
Evidence not yet annotated (Unknown) | 5 |
Irrelevant | 6 |
Position in the alignment | 9 | 10 | 16 | 26 | 37 | 45A | 45B | 45C | 49 | 58 | 64 |
---|---|---|---|---|---|---|---|---|---|---|---|
Position in the sequence | 9 | 10 | 16 | 25 | 36 | 45 | 46 | 47 | 48 | 57 | 63 |
Modification positions | m1G | m2G | D | m2,2G | t6A | m7G | D | m5C | m5C | m1A | Ar(p) |
Level of Experimental Evidence | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
Level of Experimental Reliability | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
Source | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB |