General Data

RNA Type	rRNA
Original Source	7QIZ_46
Sequence (UNICHARACTER ENCODING)	UACCUGGUUGAUCCUGCCAGUAGUCAUʍUGCUUGUCUBAAAGAUUAAGCCAUGCAUGUGUAAGUAUGAACAAAUUCAGACUGUGAAACUGCGAAUGGCUCAUPAAAUCAGPUAUAGUUUGPUJGAUGGUAUCUACUACUBGGAUAACCGUAGUAAUUCUAGʍGCUAAUACGUGCAACAAACCCCGACUUCUGGAAGGGAUGCAUUUAPUAGAUAAAAGGUCGACGCGGGCUCUGCCCGUUGCUGC#AUGAUUCAPGAPAACUCGACGGAUCGCACGGCCAUCGUGCCGGCGACGCAUCAPUCAAAPUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUGGUGACGGGPGACGGAGAAUUAGGGUUCGAPUCCGGAGA#GGAGCCUGAGAAACGGCUACCACAUBCAAGGAAGGCAGCAGGCGCGCʍAAUUACCCAAPCCUGACACGGGGAGGUʍGUGABAAUAAAUAACAAUACCGGGCUCUAUGAGUCUGGUAAUUGGAAUGAGUACAAUCUAAAUCCCUUAACGAGGʍUCCAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGJAAPUCCAGCUCCAAUA#CGUAZAPUUAAGUUGJUGCAGUUʍAAAAGCUCGUAGPUGGACUUUGGGAUGGGCCGGCCGGUCCGCCCUAGGUGUGCACCGGUCGUCUCGUCCCUUCUGUCGGCGAUGCGCUCCUGGCCUUAAUUGGCCGGGUCGUGCCUCCGGCGCUGUUACUPUGAAGAAAPUAGAGUGCUCAAAGCAAGCCUACGCUCUGUAUACAUUʍGCAUGGGAPAACAUUAUAGGAUUUCGGUCCUAUUACGUUGGCCUUCGGGAUCGGAGUAAUGAUUAACAGGGACAGUCGGGGGCAUUCGUAUUUCAUAGUCAGAGGUGAAAUPCUUGGAUUUAUGAAAGACGAACAACUGCGAAAGCAUPPGCCAAGGAUGUUUUCAUUAAUCAAGAʍCGAAAGUUGGGGGCUCGAAGACGAPCAGAUACCGJCCUAGUCUCAACCAPAAACGAUGCCGACCAGGGAUCGGCGGAUGUUGCUUUUAGGACUCCGCCGGCACCUUAUGAGAAAUCAAAGUUUUUGGGPUCCGGGGGGAGUAPGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCPGCGGCPUAAUUPGACNCAACACGGGGAAACUPACCAGGPBCAGACAUAGUAAGGAUUGACAGACUGAGAGCUCUUUCUUGAUUCJAJGGGUGGJG#UGCAUGGCMGUUCUUAGUPGGUGGAGCGAPUUGPCUGGPUAAUUCCGUUAACGAʍCGAGACCUCAGCCUGCUAACUAGCUAUGCGGAGGUAUCCCUUCGCGGCCAGCUJCUUAGAGGGACUACGGCCUUUUAGGCCGCGGAAGUUUGAGGCAAUAACA#GUCUGUGAUGCCCJUAGAUGUUCUGGGCCGCACGCGCGCUACACUGAUGUAPUCAACGAGCUUAUAGCCUUGGCCGACAGGCCCGGGUAAUCUUUGAAAUUPCAPCGUGAUGGGGAUAGAUCAUUGCAAUUGUPGGUCUUCAACGʍG7AAUUCCUAGUAAGCGCGAGUCAUCAGCUCGCGUUGACUACGUCCCUGCCCUUPGUACACACCGBCCGUCGCUCCUACCGAUUGAAUGAUCCGGUGAAAUGUUCGGAUCGCGGCGACGUGGGCGGUUCGCUGCCCGCGACGUCGCGAGAAGUCCAUUGAACCUUAUCAUUUAGAGGAʍGGAGAAGUCGUAЖCAAGGUUUCMGUAGGUGζζCCUGCGGAAGGAUCAUUG
Sequence (SHORT NAMES ENCODING)	UACCUGGUUGAUCCUGCCAGUAGUCAUpAmUGCUUGUCUpCmAAAGAUUAAGCCAUGCAUGUGUAAGUAUGAACAAAUUCAGACUGUGAAACUGCGAAUGGCUCAUpYAAAUCAGpYUAUAGUUUGpYUpUmGAUGGUAUCUACUACUpCmGGAUAACCGUAGUAAUUCUAGpAmGCUAAUACGUGCAACAAACCCCGACUUCUGGAAGGGAUGCAUUUApYUAGAUAAAAGGUCGACGCGGGCUCUGCCCGUUGCUGCpGmAUGAUUCApYGApYAACUCGACGGAUCGCACGGCCAUCGUGCCGGCGACGCAUCApYUCAAApYUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUGGUGACGGGpYGACGGAGAAUUAGGGUUCGApYUCCGGAGApGmGGAGCCUGAGAAACGGCUACCACAUpCmCAAGGAAGGCAGCAGGCGCGCpAmAAUUACCCAApYCCUGACACGGGGAGGUpAmGUGApCmAAUAAAUAACAAUACCGGGCUCUAUGAGUCUGGUAAUUGGAAUGAGUACAAUCUAAAUCCCUUAACGAGGpAmUCCAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGpUmAApYUCCAGCUCCAAUApGmCGUApYmApYUUAAGUUGpUmUGCAGUUpAmAAAAGCUCGUAGpYUGGACUUUGGGAUGGGCCGGCCGGUCCGCCCUAGGUGUGCACCGGUCGUCUCGUCCCUUCUGUCGGCGAUGCGCUCCUGGCCUUAAUUGGCCGGGUCGUGCCUCCGGCGCUGUUACUpYUGAAGAAApYUAGAGUGCUCAAAGCAAGCCUACGCUCUGUAUACAUUpAmGCAUGGGApYAACAUUAUAGGAUUUCGGUCCUAUUACGUUGGCCUUCGGGAUCGGAGUAAUGAUUAACAGGGACAGUCGGGGGCAUUCGUAUUUCAUAGUCAGAGGUGAAAUpYCUUGGAUUUAUGAAAGACGAACAACUGCGAAAGCAUpYpYGCCAAGGAUGUUUUCAUUAAUCAAGApAmCGAAAGUUGGGGGCUCGAAGACGApYCAGAUACCGpUmCCUAGUCUCAACCApYAAACGAUGCCGACCAGGGAUCGGCGGAUGUUGCUUUUAGGACUCCGCCGGCACCUUAUGAGAAAUCAAAGUUUUUGGGpYUCCGGGGGGAGUApYGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCpYGCGGCpYUAAUUpYGACxUCAACACGGGGAAACUpYACCAGGpYpCmCAGACAUAGUAAGGAUUGACAGACUGAGAGCUCUUUCUUGAUUCpUmApUmGGGUGGpUmGpGmUGCAUGGCpac4CGUUCUUAGUpYGGUGGAGCGApYUUGpYCUGGpYUAAUUCCGUUAACGApAmCGAGACCUCAGCCUGCUAACUAGCUAUGCGGAGGUAUCCCUUCGCGGCCAGCUpUmCUUAGAGGGACUACGGCCUUUUAGGCCGCGGAAGUUUGAGGCAAUAACApGmGUCUGUGAUGCCCpUmUAGAUGUUCUGGGCCGCACGCGCGCUACACUGAUGUApYUCAACGAGCUUAUAGCCUUGGCCGACAGGCCCGGGUAAUCUUUGAAAUUpYCApYCGUGAUGGGGAUAGAUCAUUGCAAUUGUpYGGUCUUCAACGpAmGpm7GAAUUCCUAGUAAGCGCGAGUCAUCAGCUCGCGUUGACUACGUCCCUGCCCUUpYGUACACACCGpCmCCGUCGCUCCUACCGAUUGAAUGAUCCGGUGAAAUGUUCGGAUCGCGGCGACGUGGGCGGUUCGCUGCCCGCGACGUCGCGAGAAGUCCAUUGAACCUUAUCAUUUAGAGGApAmGGAGAAGUCGUApm6ACAAGGUUUCpac4CGUAGGUGpm6,6Apm6,6ACCUGCGGAAGGAUCAUUG
Sequence (MODOMICS CODE ENCODING)	UACCUGGUUGAUCCUGCCAGUAGUCAU2000090551AUGCUUGUCU2000090551CAAAGAUUAAGCCAUGCAUGUGUAAGUAUGAACAAAUUCAGACUGUGAAACUGCGAAUGGCUCAU2000009551UAAAUCAG2000009551UUAUAGUUUG2000009551UU2000090551UGAUGGUAUCUACUACU2000090551CGGAUAACCGUAGUAAUUCUAG2000090551AGCUAAUACGUGCAACAAACCCCGACUUCUGGAAGGGAUGCAUUUA2000009551UUAGAUAAAAGGUCGACGCGGGCUCUGCCCGUUGCUGC2000090551GAUGAUUCA2000009551UGA2000009551UAACUCGACGGAUCGCACGGCCAUCGUGCCGGCGACGCAUCA2000009551UUCAAA2000009551UUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUGGUGACGGG2000009551UGACGGAGAAUUAGGGUUCGA2000009551UUCCGGAGA2000090551GGGAGCCUGAGAAACGGCUACCACAU2000090551CCAAGGAAGGCAGCAGGCGCGC2000090551AAAUUACCCAA2000009551UCCUGACACGGGGAGGU2000090551AGUGA2000090551CAAUAAAUAACAAUACCGGGCUCUAUGAGUCUGGUAAUUGGAAUGAGUACAAUCUAAAUCCCUUAACGAGG2000090551AUCCAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGG2000090551UAA2000009551UUCCAGCUCCAAUA2000090551GCGUA2000909551UA2000009551UUUAAGUUG2000090551UUGCAGUU2000090551AAAAAGCUCGUAG2000009551UUGGACUUUGGGAUGGGCCGGCCGGUCCGCCCUAGGUGUGCACCGGUCGUCUCGUCCCUUCUGUCGGCGAUGCGCUCCUGGCCUUAAUUGGCCGGGUCGUGCCUCCGGCGCUGUUACU2000009551UUGAAGAAA2000009551UUAGAGUGCUCAAAGCAAGCCUACGCUCUGUAUACAUU2000090551AGCAUGGGA2000009551UAACAUUAUAGGAUUUCGGUCCUAUUACGUUGGCCUUCGGGAUCGGAGUAAUGAUUAACAGGGACAGUCGGGGGCAUUCGUAUUUCAUAGUCAGAGGUGAAAU2000009551UCUUGGAUUUAUGAAAGACGAACAACUGCGAAAGCAU2000009551U2000009551UGCCAAGGAUGUUUUCAUUAAUCAAGA2000090551ACGAAAGUUGGGGGCUCGAAGACGA2000009551UCAGAUACCG2000090551UCCUAGUCUCAACCA2000009551UAAACGAUGCCGACCAGGGAUCGGCGGAUGUUGCUUUUAGGACUCCGCCGGCACCUUAUGAGAAAUCAAAGUUUUUGGG2000009551UUCCGGGGGGAGUA2000009551UGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCC2000009551UGCGGC2000009551UUAAUU2000009551UGAC2000000999UCAACACGGGGAAACU2000009551UACCAGG2000009551U2000090551CCAGACAUAGUAAGGAUUGACAGACUGAGAGCUCUUUCUUGAUUC2000090551UA2000090551UGGGUGG2000090551UG2000090551GUGCAUGGC2000042551CGUUCUUAGU2000009551UGGUGGAGCGA2000009551UUUG2000009551UCUGG2000009551UUAAUUCCGUUAACGA2000090551ACGAGACCUCAGCCUGCUAACUAGCUAUGCGGAGGUAUCCCUUCGCGGCCAGCU2000090551UCUUAGAGGGACUACGGCCUUUUAGGCCGCGGAAGUUUGAGGCAAUAACA2000090551GGUCUGUGAUGCCC2000090551UUAGAUGUUCUGGGCCGCACGCGCGCUACACUGAUGUA2000009551UUCAACGAGCUUAUAGCCUUGGCCGACAGGCCCGGGUAAUCUUUGAAAUU2000009551UCA2000009551UCGUGAUGGGGAUAGAUCAUUGCAAUUGU2000009551UGGUCUUCAACG2000090551AG2000007551GAAUUCCUAGUAAGCGCGAGUCAUCAGCUCGCGUUGACUACGUCCCUGCCCUU2000009551UGUACACACCG2000090551CCCGUCGCUCCUACCGAUUGAAUGAUCCGGUGAAAUGUUCGGAUCGCGGCGACGUGGGCGGUUCGCUGCCCGCGACGUCGCGAGAAGUCCAUUGAACCUUAUCAUUUAGAGGA2000090551AGGAGAAGUCGUA2000006551ACAAGGUUUC2000042551CGUAGGUG2000066551A2000066551ACCUGCGGAAGGAUCAUUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the sequence	27	37	102	110	120	122	139	161	207	245	254	257	299	305	361	382	391	417	439	450	467	472	543	580	583	597	602	604	613	621	634	752	761	799	808	911	948	949	976	1001	1011	1026	1105	1119	1177	1183	1189	1193	1209	1216	1217	1262	1264	1271	1273	1282	1292	1303	1307	1312	1328	1382	1432	1446	1484	1534	1537	1566	1578	1580	1633	1644	1757	1770	1780	1788	1789
Modification positions	pAm	pCm	pY	pY	pY	pUm	pCm	pAm	pY	pGm	pY	pY	pY	pY	pY	pY	pGm	pCm	pAm	pY	pAm	pCm	pAm	pUm	pY	pGm	pYm	pY	pUm	pAm	pY	pY	pY	pAm	pY	pY	pY	pY	pAm	pY	pUm	pY	pY	pY	pY	pY	pY	xU	pY	pY	pCm	pUm	pUm	pUm	pGm	pac4C	pY	pY	pY	pY	pAm	pUm	pGm	pUm	pY	pY	pY	pY	pAm	pm7G	pY	pCm	pAm	pm6A	pac4C	pm6,6A	pm6,6A
Level of Experimental Evidence	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS