General Data

RNA Type	tRNA
SOTerm	SO:0001036
Original Source	tdbR00000352
Secondary Structure	(((((((..((((.....[...))))..((((.......))))......(((((..]....))))))))))))....
Sequence (UNICHARACTER ENCODING)	GCGCCCG4AGAUCAAUDGGADAGAUCGCUUGACUICGKAPCAAAAG7UUGGGGGUPCGAGUCCCUCCGGGCGCACCA
Sequence (SHORT NAMES ENCODING)	GCGCCCGps4UAGAUCAAUpDGGApDAGAUCGCUUGACUpICGpm1GApYCAAAAGpm7GUUGGGGGUpYCGAGUCCCUCCGGGCGCACCA
Sequence (MODOMICS CODE ENCODING)	GCGCCCG2000074551UAGAUCAAU2000008551UGGA2000008551UAGAUCGCUUGACU2000009551ACG2000001551GA2000009551UCAAAAG2000007551GUUGGGGGU2000009551UCGAGUCCCUCCGGGCGCACCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GCGCCCG4AGAUCAAUD-GGAD-AGAUCGCUUGACUICGKAPCAAAAG7UU-------------------GGGGGUPCGAGUCCCUCCGGGCGCACCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the alignment	8	17	20A	34	37	39	45A	55
Position in the sequence	8	17	21	35	38	40	47	56
Modification positions	s4U	D	D	I	m1G	Y	m7G	Y
Level of Experimental Evidence	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS