General Data

RNA Type	tRNA
SOTerm	SO:0000265
Original Source	tdbR00000197
Secondary Structure	(((((((..((((.....[..)))).(((((.......))))).....(((((..]....))))))))))))....
Sequence (UNICHARACTER ENCODING)	GCCCGLAUALCUCAGDCGGDAGAGCAPCAGACU3UU[APCUGAGG7D??AGGG\PCAѢGUCCCUGUUCGGGCGCCA
Sequence (SHORT NAMES ENCODING)	GCCCGpm2GAUApm2GCUCAGpDCGGpDAGAGCApYCAGACUpmcm5s2UUUpms2t6AApYCUGAGGpm7GpDpm5Cpm5CAGGGpm5UmpYCApm1AGUCCCUGUUCGGGCGCCA
Sequence (MODOMICS CODE ENCODING)	GCCCG2000002551GAUA2000002551GCUCAG2000008551UCGG2000008551UAGAGCA2000009551UCAGACU2002521551UUU2002162551AA2000009551UCUGAGG2000007551G2000008551U2000005551C2000005551CAGGG2000905551U2000009551UCA2000001551AGUCCCUGUUCGGGCGCCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GCCCGLAUALCUCAGDC-GGD--AGAGCAPCAGACU3UU[APCUGAGG7D?-------------------?AGGG\PCAѢGUCCCUGUUCGGGCGCCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the alignment	6	10	16	20	27	34	37	39	45A	45B	45C	49	54	55	58
Position in the sequence	6	10	16	20	27	34	37	39	46	47	48	49	54	55	58
Modification positions	m2G	m2G	D	D	Y	mcm5s2U	ms2t6A	Y	m7G	D	m5C	m5C	m5Um	Y	m1A
Level of Experimental Evidence	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS