General Data

RNA Type	tRNA
SOTerm	SO:0000256
Original Source	tdbR00000302
Secondary Structure	(((((((..((((.....[...)))).(((((.......))))).....(((((..]....))))))))))))....
Sequence (UNICHARACTER ENCODING)	GUCUCUGUKLCGCAADCGGDXAGCGCRPPCGGCUQUU6ACCGAAAG7DUGGUGG.PCGѢGCCCACCCAGGGACGCCA
Sequence (SHORT NAMES ENCODING)	GUCUCUGUpm1Gpm2GCGCAApDCGGpDpacp3UAGCGCpm2,2GpYpYCGGCUpQUUpt6AACCGAAAGpm7GpDUGGUGGNpYCGpm1AGCCCACCCAGGGACGCCA
Sequence (MODOMICS CODE ENCODING)	GUCUCUGU2000001551G2000002551GCGCAA2000008551UCGG2000008551U2000030551UAGCGC2000022551G2000009551U2000009551UCGGCU2000042551GUU2000062551AACCGAAAG2000007551G2000008551UUGGUGG2000000000N2000009551UCG2000001551AGCCCACCCAGGGACGCCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GUCUCUGUKLCGCAADC-GGDX-AGCGCRPPCGGCUQUU6ACCGAAAG7DU-------------------GGUGG.PCGѢGCCCACCCAGGGACGCCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the alignment	9	10	16	20	20A	26	27	28	34	37	45A	45B	54	55	58
Position in the sequence	9	10	16	20	21	27	28	29	35	38	47	48	55	56	59
Modification positions	m1G	m2G	D	D	acp3U	m2,2G	Y	Y	Q	t6A	m7G	D	N	Y	m1A
Level of Experimental Evidence	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS