General Data

RNA Type	tRNA
SOTerm	SO:0000266
Original Source	tdbR00000536
Secondary Structure	(((((((...(((....[..)))..(((((.......))))).....(((((..]....))))))))))))....
Sequence (UNICHARACTER ENCODING)	AGCAGAGUKLCGCAGCGGAAGCGURCUGGGCCCAU6ACCCAGAG7D?GAUGGAUCGѢAACCAUCCUCUGCUACCA
Sequence (SHORT NAMES ENCODING)	AGCAGAGUpm1Gpm2GCGCAGCGGAAGCGUpm2,2GCUGGGCCCAUpt6AACCCAGAGpm7GpDpm5CGAUGGAUCGpm1AAACCAUCCUCUGCUACCA
Sequence (MODOMICS CODE ENCODING)	AGCAGAGU2000001551G2000002551GCGCAGCGGAAGCGU2000022551GCUGGGCCCAU2000062551AACCCAGAG2000007551G2000008551U2000005551CGAUGGAUCG2000001551AAACCAUCCUCUGCUACCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-AGCAGAGUKLCGCAGC--GGA--AGCGURCUGGGCCCAU6ACCCAGAG7D?-------------------GAUGGAUCGѢAACCAUCCUCUGCUACCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Alignment	9	10	26	37	45A	45B	45C	58
Position in the Sequence	9	10	25	36	45	46	47	57
Modification Positions	m1G	m2G	m2,2G	t6A	m7G	D	m5C	m1A
Level of Experimental Evidence	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS