Modomics - A Database of RNA Modifications

Summary:

NameHepatocellular carcinoma (A:I)
DescriptionHypo-editing of COPA is closely associated with HCC pathogenesis. ADAR2 downregulation increases the risk of liver cirrhosis and postoperative recurrence. It is associated withpoor prognoses
Related RNA reactionA:I
Found in RNAmRNA
Modified TranscriptCOPA
Mapping Technologydirect sequencing on PCR product
Quantification techniquesDSGene quantification

Enzymes connected to Hepatocellular carcinoma:

Acronym Full name Enzyme Role Organism Comment
ADARB1 Double-stranded RNA-specific editase 1 tumor-suppressor Homo sapiens

Publications:

ID Title Authors Journal Details PubMed Id DOI
1014 A disrupted RNA editing balance mediated by ADARs (Adenosine DeAminases that act on RNA) in human hepatocellular carcinoma. Chi Ho Lin,Lihua Qi,Jing Fei,Yan Li,Kol Jia Yong,Ming Liu,Yangyang Song,Raymond Kwok Kei Chow,Vanessa Hui En Ng,Yun-Fei Yuan,Daniel G Tenen,Xin-Yuan Guan, Gut [details] 23766440 10.1136/gutjnl-2012-304037