RNA Type | tRNA |
---|---|
SOTerm | None |
Original Source | 4CXH_Y |
Secondary Structure | ((((((((.((((.....[..)))).(((((.......)))))......((((..]....)))))))))))).... |
Sequence (UNICHARACTER ENCODING) | GCGGAUUUALCUCAGDDGGGAGAGCRCCGGUBUCCA*AACCGGAG7UC?UGUGTPCGѢUCCACAGAAUUCGCACCA |
Sequence (SHORT NAMES ENCODING) | GCGGAUUUApm2GCUCAGpDpDGGGAGAGCpm2,2GCCGGUpCmUCCApms2i6AAACCGGAGpm7GUCpm5CUGUGpm5UpYCGpm1AUCCACAGAAUUCGCACCA |
Sequence (MODOMICS CODE ENCODING) | GCGGAUUUA2000002551GCUCAG2000008551U2000008551UGGGAGAGC2000022551GCCGGU2000090551CUCCA2002161551AAACCGGAG2000007551GUC2000005551CUGUG2000005551U2000009551UCG2000001551AUCCACAGAAUUCGCACCA |
Consensus Secondary Structure | .(((((((..((((......[....)))).(((((.......)))))........................(((((..]....)))))))))))).... |
Alignment with Modification | -GCGGAUUUALCUCAGDD-GGG--AGAGCRCCGGUBUCCA*AACCGGAG7UC-------------------?UGUGTPCGѢUCCACAGAAUUCGCACCA |
Method Classification | Score |
---|---|
Multiple direct experimental evidence | 1 |
Direct experimental evidence | 2 |
Inferred based on indirect experimental evidence | 3 |
Predicted computationally | 4 |
Evidence not yet annotated (Unknown) | 5 |
Irrelevant | 6 |
Position in the alignment | 10 | 16 | 17 | 26 | 32 | 37 | 45A | 49 | 54 | 55 | 58 |
---|---|---|---|---|---|---|---|---|---|---|---|
Position in the sequence | 10 | 16 | 17 | 26 | 32 | 37 | 46 | 49 | 54 | 55 | 58 |
Modification positions | m2G | D | D | m2,2G | Cm | ms2i6A | m7G | m5C | m5U | Y | m1A |
Level of Experimental Evidence | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
Level of Experimental Reliability | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
Source | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB |