General Data

RNA Type	tRNA
SOTerm	SO:0000273
Original Source	tdbR00000472
Secondary Structure	(((((((..(((.....[....))).(((((.......))))).....(((((..]....))))))))))))....
Sequence (UNICHARACTER ENCODING)	GUUJCCGUKGUGPAGCGGDXAUCACAPCUGCBUIACA?GCAGAAG7CCѴCCGGTPCGѢUCCCGGGCGGAAACACCA
Sequence (SHORT NAMES ENCODING)	GUUpUmCCGUpm1GGUGpYAGCGGpDpacp3UAUCACApYCUGCpCmUpIACApm5CGCAGAAGpm7GCCxCCCGGpm5UpYCGpm1AUCCCGGGCGGAAACACCA
Sequence (MODOMICS CODE ENCODING)	GUU2000090551UCCGU2000001551GGUG2000009551UAGCGG2000008551U2000030551UAUCACA2000009551UCUGC2000090551CU2000009551AACA2000005551CGCAGAAG2000007551GCC2000000999CCCGG2000005551U2000009551UCG2000001551AUCCCGGGCGGAAACACCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GUUJCCGUKGUGPAGC--GGDX-AUCACAPCUGCBUIACA?GCAGAAG7CC-------------------ѴCCGGTPCGѢUCCCGGGCGGAAACACCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Alignment	4	9	13	20	20A	27	32	34	38	45A	49	54	55	58
Position in the Sequence	4	9	13	19	20	27	32	34	38	46	49	54	55	58
Modification Positions	Um	m1G	Y	D	acp3U	Y	Cm	I	m5C	m7G	xC	m5U	Y	m1A
Level of Experimental Evidence	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS