Modomics - A Database of RNA Modifications

Summary

Full nameany nucleoside 2'-O-methylated
Short nameNm
MODOMICS code new2000000090N
MODOMICS code
Nature of the modified residueNatural
Residue unique ID445
Found in RNAYes
Enzymes FBL (Homo sapiens)
FTSJ1 (Homo sapiens)
FlpA (Sulfolobus solfataricus)
FlpA (Methanocaldococcus jannaschii)
FlpA (Pyrococcus horikoshii)
FlpA (Archaeoglobus fulgidus)
Hen1 (Clostridium thermocellum)
Hen1 (Arabidopsis thaliana)
Nop1 (Saccharomyces cerevisiae)

Chemical information

Sum formula
Type of moietyNone
SMILES
logPNone
TPSANone
Number of atomsNone
Number of Hydrogen Bond Acceptors 1 (HBA1)None
Number of Hydrogen Bond Acceptors 2 (HBA2)None
Number of Hydrogen Bond Donors (HBD)None
InChINone
InChIKeyNone

* Chemical properties calculated with Open Babel - O'Boyle et al. Open Babel: An open chemical toolbox. J Cheminform 3, 33 (2011) (link)


Download Structures

2D  
3D  


LC-MS Information

Monoisotopic massNone
Average massNone
[M+H]+ not available
Product ions not available
Normalized LC elution time * not available
LC elution order/characteristics not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

Reactions producing any nucleoside 2'-O-methylated

Name
N:Nm

Last modification of this entry: Sept. 22, 2023